RNA–Protein interactions for RNA: ENST00000392306.2

SH2D2A-203, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,673 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-203ENST00000392306 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
SH2D2A-203ENST00000392306 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
SH2D2A-203ENST00000392306 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
SH2D2A-203ENST00000392306 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
SH2D2A-203ENST00000392306 ABCC9O60706 1549 aa24.38■■□□□ 1.49
SH2D2A-203ENST00000392306 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
SH2D2A-203ENST00000392306 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
SH2D2A-203ENST00000392306 SHROOM4Q9ULL8 1493 aa24.18■■□□□ 1.46
SH2D2A-203ENST00000392306 NACADO15069 1562 aa24■■□□□ 1.43
SH2D2A-203ENST00000392306 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
SH2D2A-203ENST00000392306 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
SH2D2A-203ENST00000392306 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
SH2D2A-203ENST00000392306 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
SH2D2A-203ENST00000392306 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
SH2D2A-203ENST00000392306 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
SH2D2A-203ENST00000392306 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
SH2D2A-203ENST00000392306 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
SH2D2A-203ENST00000392306 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
SH2D2A-203ENST00000392306 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
SH2D2A-203ENST00000392306 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
SH2D2A-203ENST00000392306 WIZO95785 1651 aa22.74■■□□□ 1.23
SH2D2A-203ENST00000392306 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.21
SH2D2A-203ENST00000392306 PEG3Q9GZU2 1588 aa22.58■■□□□ 1.2
SH2D2A-203ENST00000392306 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
SH2D2A-203ENST00000392306 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
SH2D2A-203ENST00000392306 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
SH2D2A-203ENST00000392306 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
SH2D2A-203ENST00000392306 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
SH2D2A-203ENST00000392306 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
SH2D2A-203ENST00000392306 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
SH2D2A-203ENST00000392306 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
SH2D2A-203ENST00000392306 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
SH2D2A-203ENST00000392306 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
SH2D2A-203ENST00000392306 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
SH2D2A-203ENST00000392306 DNAJC5BQ9UF47 199 aa21.82■■□□□ 1.08
SH2D2A-203ENST00000392306 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
SH2D2A-203ENST00000392306 CFTRP13569 1480 aa21.71■■□□□ 1.07
SH2D2A-203ENST00000392306 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
SH2D2A-203ENST00000392306 PRDM2Q13029 1718 aa21.64■■□□□ 1.06
SH2D2A-203ENST00000392306 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
SH2D2A-203ENST00000392306 EEA1Q15075 1411 aa21.6■■□□□ 1.05
SH2D2A-203ENST00000392306 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
SH2D2A-203ENST00000392306 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
SH2D2A-203ENST00000392306 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
SH2D2A-203ENST00000392306 FAM9AQ8IZU1 332 aaPredicted RBP21.53■■□□□ 1.04
SH2D2A-203ENST00000392306 SOGA1O94964 1423 aa21.5■■□□□ 1.03
SH2D2A-203ENST00000392306 CUX1P39880 1505 aa21.43■■□□□ 1.02
SH2D2A-203ENST00000392306 RUSC2Q8N2Y8 1516 aa21.42■■□□□ 1.02
SH2D2A-203ENST00000392306 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
SH2D2A-203ENST00000392306 NESP48681 1621 aa21.35■■□□□ 1.01
SH2D2A-203ENST00000392306 LAMC3Q9Y6N6 1575 aa21.34■■□□□ 1.01
SH2D2A-203ENST00000392306 KIF21BO75037 1637 aa21.31■■□□□ 1
SH2D2A-203ENST00000392306 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
SH2D2A-203ENST00000392306 TNIKQ9UKE5 1360 aa21.26■□□□□ 0.99
SH2D2A-203ENST00000392306 GOLGA3Q08378 1498 aa21.25■□□□□ 0.99
SH2D2A-203ENST00000392306 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
SH2D2A-203ENST00000392306 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
SH2D2A-203ENST00000392306 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
SH2D2A-203ENST00000392306 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
SH2D2A-203ENST00000392306 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
SH2D2A-203ENST00000392306 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
SH2D2A-203ENST00000392306 ERICH3Q5RHP9 1530 aa21.13■□□□□ 0.97
SH2D2A-203ENST00000392306 CEP162Q5TB80 1403 aa21.11■□□□□ 0.97
SH2D2A-203ENST00000392306 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
SH2D2A-203ENST00000392306 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SH2D2A-203ENST00000392306 TOPBP1Q92547 1522 aa21.1■□□□□ 0.97
SH2D2A-203ENST00000392306 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
SH2D2A-203ENST00000392306 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
SH2D2A-203ENST00000392306 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.95
SH2D2A-203ENST00000392306 CUX2O14529 1486 aa21.02■□□□□ 0.95
SH2D2A-203ENST00000392306 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.95
SH2D2A-203ENST00000392306 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
SH2D2A-203ENST00000392306 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
SH2D2A-203ENST00000392306 IGF1RP08069 1367 aa20.96■□□□□ 0.95
SH2D2A-203ENST00000392306 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
SH2D2A-203ENST00000392306 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
SH2D2A-203ENST00000392306 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
SH2D2A-203ENST00000392306 CLIP1P30622 1438 aa20.9■□□□□ 0.94
SH2D2A-203ENST00000392306 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
SH2D2A-203ENST00000392306 MRC2Q9UBG0 1479 aa20.85■□□□□ 0.93
SH2D2A-203ENST00000392306 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.93
SH2D2A-203ENST00000392306 CARMIL1Q5VZK9 1371 aa20.83■□□□□ 0.92
SH2D2A-203ENST00000392306 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.92
SH2D2A-203ENST00000392306 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
SH2D2A-203ENST00000392306 CUL7Q14999 1698 aa20.81■□□□□ 0.92
SH2D2A-203ENST00000392306 WDR62O43379 1518 aa20.79■□□□□ 0.92
SH2D2A-203ENST00000392306 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
SH2D2A-203ENST00000392306 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
SH2D2A-203ENST00000392306 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
SH2D2A-203ENST00000392306 ARHGAP35Q9NRY4 1499 aa20.66■□□□□ 0.9
SH2D2A-203ENST00000392306 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
SH2D2A-203ENST00000392306 IFT140Q96RY7 1462 aa20.63■□□□□ 0.89
SH2D2A-203ENST00000392306 HRCP23327 699 aa20.61■□□□□ 0.89
SH2D2A-203ENST00000392306 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
SH2D2A-203ENST00000392306 CTTNBP2Q8WZ74 1663 aa20.6■□□□□ 0.89
SH2D2A-203ENST00000392306 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
SH2D2A-203ENST00000392306 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
SH2D2A-203ENST00000392306 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
SH2D2A-203ENST00000392306 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
SH2D2A-203ENST00000392306 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms