RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 AEBP2Q6ZN18 517 aaPredicted RBP11.9□□□□□ -0.5
RNU6-1239P-201ENST00000391310 CHIC1Q5VXU3 224 aa11.13□□□□□ -0.63
RNU6-1239P-201ENST00000391310 SENP3Q9H4L4 574 aaPredicted RBP10.23□□□□□ -0.77
RNU6-1239P-201ENST00000391310 PHF23Q9BUL5 403 aaPredicted RBP10.03□□□□□ -0.8
RNU6-1239P-201ENST00000391310 FOXD1Q16676 465 aa9.55□□□□□ -0.88
RNU6-1239P-201ENST00000391310 POTEDQ86YR6 584 aa9.43□□□□□ -0.9
RNU6-1239P-201ENST00000391310 MSH5O43196 834 aa9.1□□□□□ -0.95
RNU6-1239P-201ENST00000391310 PIAS4Q8N2W9 510 aaPredicted RBP8.84□□□□□ -0.99
RNU6-1239P-201ENST00000391310 PPP6R1Q9UPN7 881 aa8.66□□□□□ -1.02
RNU6-1239P-201ENST00000391310 PLPPR3Q6T4P5 718 aa8.63□□□□□ -1.03
RNU6-1239P-201ENST00000391310 ADRA2BP18089 450 aa8.6□□□□□ -1.03
RNU6-1239P-201ENST00000391310 DMRT2Q9Y5R5 561 aa8.06□□□□□ -1.12
RNU6-1239P-201ENST00000391310 MAPK8IP2Q13387 824 aaPredicted RBP8□□□□□ -1.13
RNU6-1239P-201ENST00000391310 CACNB1Q02641 598 aaPredicted RBP7.98□□□□□ -1.13
RNU6-1239P-201ENST00000391310 SCAF1Q9H7N4 1312 aaKnown RBP7.92□□□□□ -1.14
RNU6-1239P-201ENST00000391310 RNF39Q9H2S5 420 aa7.73□□□□□ -1.17
RNU6-1239P-201ENST00000391310 DCAF8L1A6NGE4 600 aa7.69□□□□□ -1.18
RNU6-1239P-201ENST00000391310 HOXD11P31277 338 aaPredicted RBP7.63□□□□□ -1.19
RNU6-1239P-201ENST00000391310 C1QBPQ07021 282 aaKnown RBP7.6□□□□□ -1.19
RNU6-1239P-201ENST00000391310 PPP4R3CPQ6ZMV5 832 aa7.5□□□□□ -1.21
RNU6-1239P-201ENST00000391310 RNF216Q9NWF9 866 aaPredicted RBP7.48□□□□□ -1.21
RNU6-1239P-201ENST00000391310 DNAJC5BQ9UF47 199 aa7.48□□□□□ -1.21
RNU6-1239P-201ENST00000391310 CNKSR2Q8WXI2 1034 aa7.45□□□□□ -1.22
RNU6-1239P-201ENST00000391310 POTEHQ6S545 545 aa7.32□□□□□ -1.24
RNU6-1239P-201ENST00000391310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.24□□□□□ -1.25
RNU6-1239P-201ENST00000391310 NCBP3Q53F19 620 aaKnown RBP7.13□□□□□ -1.27
RNU6-1239P-201ENST00000391310 DSG3P32926 999 aa7.11□□□□□ -1.27
RNU6-1239P-201ENST00000391310 U3KPZ7 1027 aaPredicted RBP7.06□□□□□ -1.28
RNU6-1239P-201ENST00000391310 CAPN15O75808 1086 aa7.04□□□□□ -1.28
RNU6-1239P-201ENST00000391310 SPINK5Q9NQ38 1064 aaPredicted RBP7.04□□□□□ -1.28
RNU6-1239P-201ENST00000391310 NPM3O75607 178 aaKnown RBP7.01□□□□□ -1.29
RNU6-1239P-201ENST00000391310 ZNF219Q9P2Y4 722 aaPredicted RBP6.86□□□□□ -1.31
RNU6-1239P-201ENST00000391310 APLP2Q06481 763 aa6.85□□□□□ -1.31
RNU6-1239P-201ENST00000391310 ABCB7O75027 752 aa6.84□□□□□ -1.31
RNU6-1239P-201ENST00000391310 TRHP20396 242 aaPredicted RBP6.84□□□□□ -1.31
RNU6-1239P-201ENST00000391310 RBM42Q9BTD8 480 aaKnown RBP6.81□□□□□ -1.32
RNU6-1239P-201ENST00000391310 SLC4A2P04920 1241 aa6.78□□□□□ -1.32
RNU6-1239P-201ENST00000391310 CHRDL2Q6WN34 429 aa6.78□□□□□ -1.32
RNU6-1239P-201ENST00000391310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1239P-201ENST00000391310 HNRNPUL2Q1KMD3 747 aaKnown RBP6.77□□□□□ -1.33
RNU6-1239P-201ENST00000391310 SAMD1Q6SPF0 538 aaPredicted RBP6.71□□□□□ -1.34
RNU6-1239P-201ENST00000391310 SP7Q8TDD2 431 aaPredicted RBP6.71□□□□□ -1.34
RNU6-1239P-201ENST00000391310 POLA2Q14181 598 aa6.6□□□□□ -1.35
RNU6-1239P-201ENST00000391310 AKT1S1Q96B36 256 aa6.58□□□□□ -1.36
RNU6-1239P-201ENST00000391310 KCNA4P22459 653 aa6.56□□□□□ -1.36
RNU6-1239P-201ENST00000391310 PIP4P2Q8N4L2 257 aa6.54□□□□□ -1.36
RNU6-1239P-201ENST00000391310 HAX1O00165 279 aa6.51□□□□□ -1.37
RNU6-1239P-201ENST00000391310 REM2Q8IYK8 340 aaPredicted RBP6.5□□□□□ -1.37
RNU6-1239P-201ENST00000391310 MYCNP04198 464 aaPredicted RBP6.49□□□□□ -1.37
RNU6-1239P-201ENST00000391310 ZBTB12Q9Y330 459 aaPredicted RBP6.48□□□□□ -1.37
RNU6-1239P-201ENST00000391310 FXR2P51116 673 aaKnown RBP eCLIP6.46□□□□□ -1.38
RNU6-1239P-201ENST00000391310 PITPNM1O00562 1244 aa6.43□□□□□ -1.38
RNU6-1239P-201ENST00000391310 OSCARQ8IYS5 282 aa6.4□□□□□ -1.38
RNU6-1239P-201ENST00000391310 EVX2Q03828 476 aa6.39□□□□□ -1.39
RNU6-1239P-201ENST00000391310 ATF5Q9Y2D1 282 aaPredicted RBP6.35□□□□□ -1.39
RNU6-1239P-201ENST00000391310 LHX8Q68G74 356 aa6.28□□□□□ -1.4
RNU6-1239P-201ENST00000391310 C19orf67A6NJJ6 358 aa6.26□□□□□ -1.41
RNU6-1239P-201ENST00000391310 PRKAR2AP13861 404 aaKnown RBP6.25□□□□□ -1.41
RNU6-1239P-201ENST00000391310 SPDYE2BA6NHP3 402 aa6.24□□□□□ -1.41
RNU6-1239P-201ENST00000391310 GABBR2O75899 941 aa6.24□□□□□ -1.41
RNU6-1239P-201ENST00000391310 SPDYE6P0CI01 402 aa6.24□□□□□ -1.41
RNU6-1239P-201ENST00000391310 SPDYE2Q495Y8 402 aa6.24□□□□□ -1.41
RNU6-1239P-201ENST00000391310 FOXD4L1Q9NU39 408 aa6.24□□□□□ -1.41
RNU6-1239P-201ENST00000391310 SPDYE1Q8NFV5 336 aaPredicted RBP6.21□□□□□ -1.42
RNU6-1239P-201ENST00000391310 CLEC11AQ9Y240 323 aa6.17□□□□□ -1.42
RNU6-1239P-201ENST00000391310 FBLN2P98095 1184 aa6.15□□□□□ -1.42
RNU6-1239P-201ENST00000391310 PLSCR2Q9NRY7 297 aa6.14□□□□□ -1.43
RNU6-1239P-201ENST00000391310 SLC4A1APQ9BWU0 796 aaKnown RBP6.13□□□□□ -1.43
RNU6-1239P-201ENST00000391310 ATXN8OSP0DMR3 200 aa6.12□□□□□ -1.43
RNU6-1239P-201ENST00000391310 SSUH2Q9Y2M2 353 aa6.12□□□□□ -1.43
RNU6-1239P-201ENST00000391310 POTEIP0CG38 1075 aa6.1□□□□□ -1.43
RNU6-1239P-201ENST00000391310 CHADLQ6NUI6 762 aa6.09□□□□□ -1.43
RNU6-1239P-201ENST00000391310 CLCN6P51797 869 aa6.08□□□□□ -1.44
RNU6-1239P-201ENST00000391310 ZNF692Q9BU19 519 aaPredicted RBP6.08□□□□□ -1.44
RNU6-1239P-201ENST00000391310 MKRN4PQ13434 485 aaPredicted RBP6.05□□□□□ -1.44
RNU6-1239P-201ENST00000391310 PRR29P0C7W0 189 aa6.04□□□□□ -1.44
RNU6-1239P-201ENST00000391310 CD44P16070 742 aaKnown RBP6.04□□□□□ -1.44
RNU6-1239P-201ENST00000391310 ZBTB22O15209 634 aa6.03□□□□□ -1.44
RNU6-1239P-201ENST00000391310 DCBLD2Q96PD2 775 aa6□□□□□ -1.45
RNU6-1239P-201ENST00000391310 FARP1Q9Y4F1 1045 aaPredicted RBP6□□□□□ -1.45
RNU6-1239P-201ENST00000391310 PABPN1Q86U42 306 aaKnown RBP eCLIP5.98□□□□□ -1.45
RNU6-1239P-201ENST00000391310 ZNF579Q8NAF0 562 aaKnown RBP5.95□□□□□ -1.46
RNU6-1239P-201ENST00000391310 OTUD5Q96G74 571 aa5.95□□□□□ -1.46
RNU6-1239P-201ENST00000391310 POTEMA6NI47 508 aa5.93□□□□□ -1.46
RNU6-1239P-201ENST00000391310 POTEGQ6S5H5 508 aa5.9□□□□□ -1.46
RNU6-1239P-201ENST00000391310 PCDH10Q9P2E7 1040 aa5.9□□□□□ -1.46
RNU6-1239P-201ENST00000391310 POTEB2H3BUK9 544 aa5.89□□□□□ -1.47
RNU6-1239P-201ENST00000391310 ZRANB1Q9UGI0 708 aa5.89□□□□□ -1.47
RNU6-1239P-201ENST00000391310 GALR2O43603 387 aaPredicted RBP5.87□□□□□ -1.47
RNU6-1239P-201ENST00000391310 CREBZFQ9NS37 354 aa5.82□□□□□ -1.48
RNU6-1239P-201ENST00000391310 PELP1Q8IZL8 1130 aaKnown RBP5.8□□□□□ -1.48
RNU6-1239P-201ENST00000391310 PAK3O75914 559 aaPredicted RBP5.79□□□□□ -1.48
RNU6-1239P-201ENST00000391310 PHF12Q96QT6 1004 aa5.78□□□□□ -1.48
RNU6-1239P-201ENST00000391310 MAMSTRQ6ZN01 415 aa5.77□□□□□ -1.49
RNU6-1239P-201ENST00000391310 STAG3Q9UJ98 1225 aa5.77□□□□□ -1.49
RNU6-1239P-201ENST00000391310 METRNQ9UJH8 293 aa5.77□□□□□ -1.49
RNU6-1239P-201ENST00000391310 POTEJP0CG39 1038 aa5.76□□□□□ -1.49
RNU6-1239P-201ENST00000391310 C7P10643 843 aa5.76□□□□□ -1.49
RNU6-1239P-201ENST00000391310 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
RNU6-1239P-201ENST00000391310 ASTLQ6HA08 431 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms