RNA–Protein interactions for RNA: ENST00000391249.2

U3.28-201, humanhuman

BASIC

Gene U3, Length 210 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.28-201ENST00000391249 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
U3.28-201ENST00000391249 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
U3.28-201ENST00000391249 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
U3.28-201ENST00000391249 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
U3.28-201ENST00000391249 FOXD1Q16676 465 aa19.78■□□□□ 0.76
U3.28-201ENST00000391249 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
U3.28-201ENST00000391249 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
U3.28-201ENST00000391249 ADRA2BP18089 450 aa18.69■□□□□ 0.58
U3.28-201ENST00000391249 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
U3.28-201ENST00000391249 MSH5O43196 834 aa18.35■□□□□ 0.53
U3.28-201ENST00000391249 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
U3.28-201ENST00000391249 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
U3.28-201ENST00000391249 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
U3.28-201ENST00000391249 PPP4R3CPQ6ZMV5 832 aa16.98■□□□□ 0.31
U3.28-201ENST00000391249 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
U3.28-201ENST00000391249 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
U3.28-201ENST00000391249 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
U3.28-201ENST00000391249 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
U3.28-201ENST00000391249 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
U3.28-201ENST00000391249 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
U3.28-201ENST00000391249 KCNA4P22459 653 aa16.17■□□□□ 0.18
U3.28-201ENST00000391249 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
U3.28-201ENST00000391249 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
U3.28-201ENST00000391249 RNF39Q9H2S5 420 aa15.72■□□□□ 0.11
U3.28-201ENST00000391249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.08
U3.28-201ENST00000391249 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
U3.28-201ENST00000391249 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
U3.28-201ENST00000391249 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
U3.28-201ENST00000391249 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
U3.28-201ENST00000391249 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
U3.28-201ENST00000391249 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
U3.28-201ENST00000391249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
U3.28-201ENST00000391249 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
U3.28-201ENST00000391249 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
U3.28-201ENST00000391249 MYCNP04198 464 aaPredicted RBP14.95□□□□□ -0.02
U3.28-201ENST00000391249 CAPN15O75808 1086 aa14.93□□□□□ -0.02
U3.28-201ENST00000391249 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
U3.28-201ENST00000391249 ZBTB22O15209 634 aa14.9□□□□□ -0.02
U3.28-201ENST00000391249 APLP2Q06481 763 aa14.88□□□□□ -0.03
U3.28-201ENST00000391249 DSG3P32926 999 aa14.83□□□□□ -0.04
U3.28-201ENST00000391249 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
U3.28-201ENST00000391249 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
U3.28-201ENST00000391249 ABCB7O75027 752 aa14.63□□□□□ -0.07
U3.28-201ENST00000391249 ATF5Q9Y2D1 282 aaPredicted RBP14.63□□□□□ -0.07
U3.28-201ENST00000391249 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
U3.28-201ENST00000391249 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
U3.28-201ENST00000391249 POLA2Q14181 598 aa14.48□□□□□ -0.09
U3.28-201ENST00000391249 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
U3.28-201ENST00000391249 ZBTB12Q9Y330 459 aaPredicted RBP14.18□□□□□ -0.14
U3.28-201ENST00000391249 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
U3.28-201ENST00000391249 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
U3.28-201ENST00000391249 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
U3.28-201ENST00000391249 FBLN2P98095 1184 aa13.96□□□□□ -0.17
U3.28-201ENST00000391249 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
U3.28-201ENST00000391249 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
U3.28-201ENST00000391249 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
U3.28-201ENST00000391249 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
U3.28-201ENST00000391249 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
U3.28-201ENST00000391249 POTEHQ6S545 545 aa13.69□□□□□ -0.22
U3.28-201ENST00000391249 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
U3.28-201ENST00000391249 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
U3.28-201ENST00000391249 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
U3.28-201ENST00000391249 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
U3.28-201ENST00000391249 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
U3.28-201ENST00000391249 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
U3.28-201ENST00000391249 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
U3.28-201ENST00000391249 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
U3.28-201ENST00000391249 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
U3.28-201ENST00000391249 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
U3.28-201ENST00000391249 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
U3.28-201ENST00000391249 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
U3.28-201ENST00000391249 PROM2Q8N271 834 aa13.21□□□□□ -0.29
U3.28-201ENST00000391249 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
U3.28-201ENST00000391249 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
U3.28-201ENST00000391249 HAX1O00165 279 aa13.07□□□□□ -0.32
U3.28-201ENST00000391249 FKBP8Q14318 412 aa13.07□□□□□ -0.32
U3.28-201ENST00000391249 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
U3.28-201ENST00000391249 EVX2Q03828 476 aa13□□□□□ -0.33
U3.28-201ENST00000391249 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
U3.28-201ENST00000391249 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
U3.28-201ENST00000391249 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
U3.28-201ENST00000391249 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
U3.28-201ENST00000391249 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
U3.28-201ENST00000391249 MIER1Q8N108 512 aa12.76□□□□□ -0.37
U3.28-201ENST00000391249 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
U3.28-201ENST00000391249 GABBR2O75899 941 aa12.7□□□□□ -0.38
U3.28-201ENST00000391249 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
U3.28-201ENST00000391249 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
U3.28-201ENST00000391249 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
U3.28-201ENST00000391249 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
U3.28-201ENST00000391249 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
U3.28-201ENST00000391249 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
U3.28-201ENST00000391249 CLCN6P51797 869 aa12.6□□□□□ -0.39
U3.28-201ENST00000391249 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
U3.28-201ENST00000391249 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
U3.28-201ENST00000391249 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
U3.28-201ENST00000391249 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
U3.28-201ENST00000391249 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
U3.28-201ENST00000391249 NUBP1P53384 320 aa12.52□□□□□ -0.41
U3.28-201ENST00000391249 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 207.3 ms