RNA–Protein interactions for RNA: ENST00000390887.1

RNU6-328P-201, Transcript of RNA, U6 small nuclear 328, pseudogene, humanhuman

BASIC

Gene RNU6-328P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-328P-201ENST00000390887 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
RNU6-328P-201ENST00000390887 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
RNU6-328P-201ENST00000390887 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
RNU6-328P-201ENST00000390887 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
RNU6-328P-201ENST00000390887 FOXD1Q16676 465 aa14.51□□□□□ -0.09
RNU6-328P-201ENST00000390887 PLPPR3Q6T4P5 718 aa14.05□□□□□ -0.16
RNU6-328P-201ENST00000390887 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
RNU6-328P-201ENST00000390887 ADRA2BP18089 450 aa13.75□□□□□ -0.21
RNU6-328P-201ENST00000390887 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
RNU6-328P-201ENST00000390887 MSH5O43196 834 aa13.37□□□□□ -0.27
RNU6-328P-201ENST00000390887 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
RNU6-328P-201ENST00000390887 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
RNU6-328P-201ENST00000390887 PPP4R3CPQ6ZMV5 832 aa12.41□□□□□ -0.42
RNU6-328P-201ENST00000390887 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
RNU6-328P-201ENST00000390887 DMRT2Q9Y5R5 561 aa12.34□□□□□ -0.43
RNU6-328P-201ENST00000390887 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
RNU6-328P-201ENST00000390887 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
RNU6-328P-201ENST00000390887 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
RNU6-328P-201ENST00000390887 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
RNU6-328P-201ENST00000390887 NCBP3Q53F19 620 aaKnown RBP11.88□□□□□ -0.51
RNU6-328P-201ENST00000390887 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
RNU6-328P-201ENST00000390887 KCNA4P22459 653 aa11.83□□□□□ -0.52
RNU6-328P-201ENST00000390887 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
RNU6-328P-201ENST00000390887 CACNB1Q02641 598 aaPredicted RBP11.44□□□□□ -0.58
RNU6-328P-201ENST00000390887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.42□□□□□ -0.58
RNU6-328P-201ENST00000390887 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
RNU6-328P-201ENST00000390887 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
RNU6-328P-201ENST00000390887 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
RNU6-328P-201ENST00000390887 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
RNU6-328P-201ENST00000390887 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
RNU6-328P-201ENST00000390887 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
RNU6-328P-201ENST00000390887 CAPN15O75808 1086 aa10.98□□□□□ -0.65
RNU6-328P-201ENST00000390887 ZBTB22O15209 634 aa10.93□□□□□ -0.66
RNU6-328P-201ENST00000390887 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
RNU6-328P-201ENST00000390887 TRHP20396 242 aaPredicted RBP10.88□□□□□ -0.67
RNU6-328P-201ENST00000390887 MYCNP04198 464 aaPredicted RBP10.86□□□□□ -0.67
RNU6-328P-201ENST00000390887 DSG3P32926 999 aa10.86□□□□□ -0.67
RNU6-328P-201ENST00000390887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
RNU6-328P-201ENST00000390887 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
RNU6-328P-201ENST00000390887 ABCB7O75027 752 aa10.81□□□□□ -0.68
RNU6-328P-201ENST00000390887 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
RNU6-328P-201ENST00000390887 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
RNU6-328P-201ENST00000390887 APLP2Q06481 763 aa10.74□□□□□ -0.69
RNU6-328P-201ENST00000390887 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
RNU6-328P-201ENST00000390887 POLA2Q14181 598 aa10.61□□□□□ -0.71
RNU6-328P-201ENST00000390887 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
RNU6-328P-201ENST00000390887 CSRNP3Q8WYN3 585 aa10.56□□□□□ -0.72
RNU6-328P-201ENST00000390887 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
RNU6-328P-201ENST00000390887 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
RNU6-328P-201ENST00000390887 ZBTB12Q9Y330 459 aaPredicted RBP10.26□□□□□ -0.77
RNU6-328P-201ENST00000390887 MKRN4PQ13434 485 aaPredicted RBP10.23□□□□□ -0.77
RNU6-328P-201ENST00000390887 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
RNU6-328P-201ENST00000390887 FBLN2P98095 1184 aa10.15□□□□□ -0.78
RNU6-328P-201ENST00000390887 POTEHQ6S545 545 aa10.08□□□□□ -0.8
RNU6-328P-201ENST00000390887 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
RNU6-328P-201ENST00000390887 REM2Q8IYK8 340 aaPredicted RBP10.06□□□□□ -0.8
RNU6-328P-201ENST00000390887 CHRDL2Q6WN34 429 aa10.03□□□□□ -0.8
RNU6-328P-201ENST00000390887 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.81
RNU6-328P-201ENST00000390887 SPDYE6P0CI01 402 aa10.02□□□□□ -0.81
RNU6-328P-201ENST00000390887 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
RNU6-328P-201ENST00000390887 ZNF692Q9BU19 519 aaPredicted RBP9.99□□□□□ -0.81
RNU6-328P-201ENST00000390887 PITPNM1O00562 1244 aa9.98□□□□□ -0.81
RNU6-328P-201ENST00000390887 SSUH2Q9Y2M2 353 aa9.94□□□□□ -0.82
RNU6-328P-201ENST00000390887 PABPN1Q86U42 306 aaKnown RBP eCLIP9.88□□□□□ -0.83
RNU6-328P-201ENST00000390887 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
RNU6-328P-201ENST00000390887 CLEC11AQ9Y240 323 aa9.87□□□□□ -0.83
RNU6-328P-201ENST00000390887 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
RNU6-328P-201ENST00000390887 FXR2P51116 673 aaKnown RBP eCLIP9.8□□□□□ -0.84
RNU6-328P-201ENST00000390887 SPDYE1Q8NFV5 336 aaPredicted RBP9.79□□□□□ -0.84
RNU6-328P-201ENST00000390887 CHADLQ6NUI6 762 aa9.72□□□□□ -0.85
RNU6-328P-201ENST00000390887 PRKAR2AP13861 404 aaKnown RBP9.71□□□□□ -0.86
RNU6-328P-201ENST00000390887 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
RNU6-328P-201ENST00000390887 HAX1O00165 279 aa9.62□□□□□ -0.87
RNU6-328P-201ENST00000390887 EVX2Q03828 476 aa9.62□□□□□ -0.87
RNU6-328P-201ENST00000390887 FKBP8Q14318 412 aa9.57□□□□□ -0.88
RNU6-328P-201ENST00000390887 PROM2Q8N271 834 aa9.54□□□□□ -0.88
RNU6-328P-201ENST00000390887 CREBZFQ9NS37 354 aa9.53□□□□□ -0.88
RNU6-328P-201ENST00000390887 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
RNU6-328P-201ENST00000390887 STAG3Q9UJ98 1225 aa9.51□□□□□ -0.89
RNU6-328P-201ENST00000390887 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
RNU6-328P-201ENST00000390887 C19orf67A6NJJ6 358 aa9.48□□□□□ -0.89
RNU6-328P-201ENST00000390887 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
RNU6-328P-201ENST00000390887 MNX1P50219 401 aaPredicted RBP9.39□□□□□ -0.91
RNU6-328P-201ENST00000390887 GABBR2O75899 941 aa9.32□□□□□ -0.92
RNU6-328P-201ENST00000390887 MIER1Q8N108 512 aa9.32□□□□□ -0.92
RNU6-328P-201ENST00000390887 ZRANB1Q9UGI0 708 aa9.31□□□□□ -0.92
RNU6-328P-201ENST00000390887 PLCD3Q8N3E9 789 aa9.27□□□□□ -0.93
RNU6-328P-201ENST00000390887 PHF12Q96QT6 1004 aa9.26□□□□□ -0.93
RNU6-328P-201ENST00000390887 NPM1P06748 294 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU6-328P-201ENST00000390887 TSPYL2Q9H2G4 693 aaPredicted RBP9.24□□□□□ -0.93
RNU6-328P-201ENST00000390887 ZNF579Q8NAF0 562 aaKnown RBP9.22□□□□□ -0.93
RNU6-328P-201ENST00000390887 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
RNU6-328P-201ENST00000390887 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
RNU6-328P-201ENST00000390887 PAK3O75914 559 aaPredicted RBP9.18□□□□□ -0.94
RNU6-328P-201ENST00000390887 PLEKHG5O94827 1062 aa9.18□□□□□ -0.94
RNU6-328P-201ENST00000390887 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
RNU6-328P-201ENST00000390887 FBXO3Q9UK99 471 aa9.15□□□□□ -0.94
RNU6-328P-201ENST00000390887 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
RNU6-328P-201ENST00000390887 NUBP1P53384 320 aa9.13□□□□□ -0.95
RNU6-328P-201ENST00000390887 CCDC61Q9Y6R9 512 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms