RNA–Protein interactions for RNA: ENST00000390437.2

TRAV12-2-201, Transcript of T cell receptor alpha variable 12-2, humanhuman

APPRIS P1 BASIC

Gene TRAV12-2, Length 445 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2-201ENST00000390437 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
TRAV12-2-201ENST00000390437 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
TRAV12-2-201ENST00000390437 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
TRAV12-2-201ENST00000390437 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
TRAV12-2-201ENST00000390437 FOXD1Q16676 465 aa15.99■□□□□ 0.15
TRAV12-2-201ENST00000390437 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
TRAV12-2-201ENST00000390437 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
TRAV12-2-201ENST00000390437 ADRA2BP18089 450 aa14.98□□□□□ -0.01
TRAV12-2-201ENST00000390437 MSH5O43196 834 aa14.96□□□□□ -0.01
TRAV12-2-201ENST00000390437 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
TRAV12-2-201ENST00000390437 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
TRAV12-2-201ENST00000390437 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
TRAV12-2-201ENST00000390437 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
TRAV12-2-201ENST00000390437 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
TRAV12-2-201ENST00000390437 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
TRAV12-2-201ENST00000390437 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
TRAV12-2-201ENST00000390437 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
TRAV12-2-201ENST00000390437 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
TRAV12-2-201ENST00000390437 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
TRAV12-2-201ENST00000390437 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
TRAV12-2-201ENST00000390437 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
TRAV12-2-201ENST00000390437 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
TRAV12-2-201ENST00000390437 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
TRAV12-2-201ENST00000390437 KCNA4P22459 653 aa12.72□□□□□ -0.37
TRAV12-2-201ENST00000390437 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
TRAV12-2-201ENST00000390437 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
TRAV12-2-201ENST00000390437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRAV12-2-201ENST00000390437 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
TRAV12-2-201ENST00000390437 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
TRAV12-2-201ENST00000390437 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
TRAV12-2-201ENST00000390437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
TRAV12-2-201ENST00000390437 CAPN15O75808 1086 aa12.05□□□□□ -0.48
TRAV12-2-201ENST00000390437 HNRNPUL2Q1KMD3 747 aaKnown RBP12.05□□□□□ -0.48
TRAV12-2-201ENST00000390437 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
TRAV12-2-201ENST00000390437 APLP2Q06481 763 aa12.04□□□□□ -0.48
TRAV12-2-201ENST00000390437 DSG3P32926 999 aa11.98□□□□□ -0.49
TRAV12-2-201ENST00000390437 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
TRAV12-2-201ENST00000390437 MYCNP04198 464 aaPredicted RBP11.93□□□□□ -0.5
TRAV12-2-201ENST00000390437 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
TRAV12-2-201ENST00000390437 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
TRAV12-2-201ENST00000390437 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
TRAV12-2-201ENST00000390437 ABCB7O75027 752 aa11.76□□□□□ -0.53
TRAV12-2-201ENST00000390437 ZBTB22O15209 634 aa11.7□□□□□ -0.54
TRAV12-2-201ENST00000390437 POLA2Q14181 598 aa11.62□□□□□ -0.55
TRAV12-2-201ENST00000390437 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
TRAV12-2-201ENST00000390437 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
TRAV12-2-201ENST00000390437 NISCHQ9Y2I1 1504 aa11.5□□□□□ -0.57
TRAV12-2-201ENST00000390437 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
TRAV12-2-201ENST00000390437 ZBTB12Q9Y330 459 aaPredicted RBP11.43□□□□□ -0.58
TRAV12-2-201ENST00000390437 CSRNP3Q8WYN3 585 aa11.29□□□□□ -0.6
TRAV12-2-201ENST00000390437 POTEHQ6S545 545 aa11.27□□□□□ -0.61
TRAV12-2-201ENST00000390437 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
TRAV12-2-201ENST00000390437 AKT1S1Q96B36 256 aa11.21□□□□□ -0.61
TRAV12-2-201ENST00000390437 FBLN2P98095 1184 aa11.18□□□□□ -0.62
TRAV12-2-201ENST00000390437 EHMT2Q96KQ7 1210 aa11.15□□□□□ -0.62
TRAV12-2-201ENST00000390437 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
TRAV12-2-201ENST00000390437 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
TRAV12-2-201ENST00000390437 REM2Q8IYK8 340 aaPredicted RBP11.08□□□□□ -0.64
TRAV12-2-201ENST00000390437 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
TRAV12-2-201ENST00000390437 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
TRAV12-2-201ENST00000390437 SPDYE2Q495Y8 402 aa11.07□□□□□ -0.64
TRAV12-2-201ENST00000390437 ABCC9O60706 1549 aa10.99□□□□□ -0.65
TRAV12-2-201ENST00000390437 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
TRAV12-2-201ENST00000390437 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
TRAV12-2-201ENST00000390437 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
TRAV12-2-201ENST00000390437 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
TRAV12-2-201ENST00000390437 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAV12-2-201ENST00000390437 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
TRAV12-2-201ENST00000390437 CLEC11AQ9Y240 323 aa10.78□□□□□ -0.68
TRAV12-2-201ENST00000390437 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRAV12-2-201ENST00000390437 PRKAR2AP13861 404 aaKnown RBP10.67□□□□□ -0.7
TRAV12-2-201ENST00000390437 PRR29P0C7W0 189 aa10.65□□□□□ -0.7
TRAV12-2-201ENST00000390437 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
TRAV12-2-201ENST00000390437 HAX1O00165 279 aa10.64□□□□□ -0.71
TRAV12-2-201ENST00000390437 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
TRAV12-2-201ENST00000390437 STAG3Q9UJ98 1225 aa10.56□□□□□ -0.72
TRAV12-2-201ENST00000390437 CHADLQ6NUI6 762 aa10.55□□□□□ -0.72
TRAV12-2-201ENST00000390437 EVX2Q03828 476 aa10.51□□□□□ -0.73
TRAV12-2-201ENST00000390437 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
TRAV12-2-201ENST00000390437 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
TRAV12-2-201ENST00000390437 PROM2Q8N271 834 aa10.44□□□□□ -0.74
TRAV12-2-201ENST00000390437 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
TRAV12-2-201ENST00000390437 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
TRAV12-2-201ENST00000390437 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
TRAV12-2-201ENST00000390437 CCDC180Q9P1Z9 1646 aa10.33□□□□□ -0.76
TRAV12-2-201ENST00000390437 GABBR2O75899 941 aa10.3□□□□□ -0.76
TRAV12-2-201ENST00000390437 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
TRAV12-2-201ENST00000390437 CLCN6P51797 869 aa10.27□□□□□ -0.77
TRAV12-2-201ENST00000390437 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRAV12-2-201ENST00000390437 FKBP8Q14318 412 aa10.21□□□□□ -0.77
TRAV12-2-201ENST00000390437 ZNF579Q8NAF0 562 aaKnown RBP10.21□□□□□ -0.77
TRAV12-2-201ENST00000390437 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.77
TRAV12-2-201ENST00000390437 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
TRAV12-2-201ENST00000390437 PAK3O75914 559 aaPredicted RBP10.17□□□□□ -0.78
TRAV12-2-201ENST00000390437 PLEKHG5O94827 1062 aa10.14□□□□□ -0.79
TRAV12-2-201ENST00000390437 MIER1Q8N108 512 aa10.14□□□□□ -0.79
TRAV12-2-201ENST00000390437 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
TRAV12-2-201ENST00000390437 POTEIP0CG38 1075 aa10.08□□□□□ -0.8
TRAV12-2-201ENST00000390437 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
TRAV12-2-201ENST00000390437 DCBLD2Q96PD2 775 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms