RNA–Protein interactions for RNA: ENST00000384741.1

RNU6-41P-201, Transcript of RNA, U6 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU6-41P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-41P-201ENST00000384741 AEBP2Q6ZN18 517 aaPredicted RBP15.68■□□□□ 0.1
RNU6-41P-201ENST00000384741 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
RNU6-41P-201ENST00000384741 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
RNU6-41P-201ENST00000384741 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
RNU6-41P-201ENST00000384741 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
RNU6-41P-201ENST00000384741 FOXD1Q16676 465 aa12.63□□□□□ -0.39
RNU6-41P-201ENST00000384741 MSH5O43196 834 aa12.06□□□□□ -0.48
RNU6-41P-201ENST00000384741 PIAS4Q8N2W9 510 aaPredicted RBP11.6□□□□□ -0.55
RNU6-41P-201ENST00000384741 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
RNU6-41P-201ENST00000384741 ADRA2BP18089 450 aa11.16□□□□□ -0.62
RNU6-41P-201ENST00000384741 PLPPR3Q6T4P5 718 aa10.94□□□□□ -0.66
RNU6-41P-201ENST00000384741 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
RNU6-41P-201ENST00000384741 DMRT2Q9Y5R5 561 aa10.56□□□□□ -0.72
RNU6-41P-201ENST00000384741 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
RNU6-41P-201ENST00000384741 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
RNU6-41P-201ENST00000384741 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
RNU6-41P-201ENST00000384741 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
RNU6-41P-201ENST00000384741 POTEHQ6S545 545 aa10.05□□□□□ -0.8
RNU6-41P-201ENST00000384741 C1QBPQ07021 282 aaKnown RBP10.03□□□□□ -0.8
RNU6-41P-201ENST00000384741 HOXD11P31277 338 aaPredicted RBP9.89□□□□□ -0.83
RNU6-41P-201ENST00000384741 DNAJC5BQ9UF47 199 aa9.69□□□□□ -0.86
RNU6-41P-201ENST00000384741 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
RNU6-41P-201ENST00000384741 PPP4R3CPQ6ZMV5 832 aa9.51□□□□□ -0.89
RNU6-41P-201ENST00000384741 CNKSR2Q8WXI2 1034 aa9.49□□□□□ -0.89
RNU6-41P-201ENST00000384741 DSG3P32926 999 aa9.36□□□□□ -0.91
RNU6-41P-201ENST00000384741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.35□□□□□ -0.91
RNU6-41P-201ENST00000384741 SPINK5Q9NQ38 1064 aaPredicted RBP9.22□□□□□ -0.93
RNU6-41P-201ENST00000384741 CAPN15O75808 1086 aa9.19□□□□□ -0.94
RNU6-41P-201ENST00000384741 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
RNU6-41P-201ENST00000384741 SP7Q8TDD2 431 aaPredicted RBP9.09□□□□□ -0.95
RNU6-41P-201ENST00000384741 CHRDL2Q6WN34 429 aa9.02□□□□□ -0.97
RNU6-41P-201ENST00000384741 ABCB7O75027 752 aa8.94□□□□□ -0.98
RNU6-41P-201ENST00000384741 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.98
RNU6-41P-201ENST00000384741 TRHP20396 242 aaPredicted RBP8.87□□□□□ -0.99
RNU6-41P-201ENST00000384741 NCBP3Q53F19 620 aaKnown RBP8.87□□□□□ -0.99
RNU6-41P-201ENST00000384741 ZNF219Q9P2Y4 722 aaPredicted RBP8.84□□□□□ -0.99
RNU6-41P-201ENST00000384741 NPM3O75607 178 aaKnown RBP8.82□□□□□ -1
RNU6-41P-201ENST00000384741 APLP2Q06481 763 aa8.73□□□□□ -1.01
RNU6-41P-201ENST00000384741 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
RNU6-41P-201ENST00000384741 HAX1O00165 279 aa8.65□□□□□ -1.02
RNU6-41P-201ENST00000384741 SLC4A2P04920 1241 aa8.63□□□□□ -1.03
RNU6-41P-201ENST00000384741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.56□□□□□ -1.04
RNU6-41P-201ENST00000384741 EVX2Q03828 476 aa8.56□□□□□ -1.04
RNU6-41P-201ENST00000384741 HNRNPUL2Q1KMD3 747 aaKnown RBP8.56□□□□□ -1.04
RNU6-41P-201ENST00000384741 AKT1S1Q96B36 256 aa8.56□□□□□ -1.04
RNU6-41P-201ENST00000384741 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
RNU6-41P-201ENST00000384741 FXR2P51116 673 aaKnown RBP eCLIP8.5□□□□□ -1.05
RNU6-41P-201ENST00000384741 LHX8Q68G74 356 aa8.49□□□□□ -1.05
RNU6-41P-201ENST00000384741 SAMD1Q6SPF0 538 aaPredicted RBP8.49□□□□□ -1.05
RNU6-41P-201ENST00000384741 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
RNU6-41P-201ENST00000384741 POLA2Q14181 598 aa8.48□□□□□ -1.05
RNU6-41P-201ENST00000384741 PITPNM1O00562 1244 aa8.43□□□□□ -1.06
RNU6-41P-201ENST00000384741 GABBR2O75899 941 aa8.3□□□□□ -1.08
RNU6-41P-201ENST00000384741 OSCARQ8IYS5 282 aa8.28□□□□□ -1.08
RNU6-41P-201ENST00000384741 C19orf67A6NJJ6 358 aa8.26□□□□□ -1.09
RNU6-41P-201ENST00000384741 ZBTB12Q9Y330 459 aaPredicted RBP8.23□□□□□ -1.09
RNU6-41P-201ENST00000384741 PRKAR2AP13861 404 aaKnown RBP8.18□□□□□ -1.1
RNU6-41P-201ENST00000384741 POTEIP0CG38 1075 aa8.16□□□□□ -1.1
RNU6-41P-201ENST00000384741 MYCNP04198 464 aaPredicted RBP8.15□□□□□ -1.1
RNU6-41P-201ENST00000384741 ATF5Q9Y2D1 282 aaPredicted RBP8.06□□□□□ -1.12
RNU6-41P-201ENST00000384741 POTEMA6NI47 508 aa8.05□□□□□ -1.12
RNU6-41P-201ENST00000384741 KCNA4P22459 653 aa8.01□□□□□ -1.13
RNU6-41P-201ENST00000384741 POTEGQ6S5H5 508 aa8□□□□□ -1.13
RNU6-41P-201ENST00000384741 OTUD5Q96G74 571 aa7.97□□□□□ -1.13
RNU6-41P-201ENST00000384741 CLEC11AQ9Y240 323 aa7.97□□□□□ -1.13
RNU6-41P-201ENST00000384741 SPDYE1Q8NFV5 336 aaPredicted RBP7.96□□□□□ -1.14
RNU6-41P-201ENST00000384741 SPDYE2BA6NHP3 402 aa7.94□□□□□ -1.14
RNU6-41P-201ENST00000384741 SPDYE6P0CI01 402 aa7.94□□□□□ -1.14
RNU6-41P-201ENST00000384741 SPDYE2Q495Y8 402 aa7.94□□□□□ -1.14
RNU6-41P-201ENST00000384741 CHADLQ6NUI6 762 aa7.94□□□□□ -1.14
RNU6-41P-201ENST00000384741 PCDH10Q9P2E7 1040 aa7.92□□□□□ -1.14
RNU6-41P-201ENST00000384741 POTEB2H3BUK9 544 aa7.87□□□□□ -1.15
RNU6-41P-201ENST00000384741 CD44P16070 742 aaKnown RBP7.87□□□□□ -1.15
RNU6-41P-201ENST00000384741 CLCN6P51797 869 aa7.87□□□□□ -1.15
RNU6-41P-201ENST00000384741 DCBLD2Q96PD2 775 aa7.87□□□□□ -1.15
RNU6-41P-201ENST00000384741 SSUH2Q9Y2M2 353 aa7.8□□□□□ -1.16
RNU6-41P-201ENST00000384741 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
RNU6-41P-201ENST00000384741 ZNF579Q8NAF0 562 aaKnown RBP7.75□□□□□ -1.17
RNU6-41P-201ENST00000384741 PRR29P0C7W0 189 aa7.73□□□□□ -1.17
RNU6-41P-201ENST00000384741 FARP1Q9Y4F1 1045 aaPredicted RBP7.73□□□□□ -1.17
RNU6-41P-201ENST00000384741 FBLN2P98095 1184 aa7.71□□□□□ -1.18
RNU6-41P-201ENST00000384741 GALR2O43603 387 aaPredicted RBP7.7□□□□□ -1.18
RNU6-41P-201ENST00000384741 ZNF692Q9BU19 519 aaPredicted RBP7.7□□□□□ -1.18
RNU6-41P-201ENST00000384741 FOXD4L1Q9NU39 408 aa7.68□□□□□ -1.18
RNU6-41P-201ENST00000384741 MKRN4PQ13434 485 aaPredicted RBP7.66□□□□□ -1.18
RNU6-41P-201ENST00000384741 POTEJP0CG39 1038 aa7.65□□□□□ -1.18
RNU6-41P-201ENST00000384741 PELP1Q8IZL8 1130 aaKnown RBP7.63□□□□□ -1.19
RNU6-41P-201ENST00000384741 ZRANB1Q9UGI0 708 aa7.63□□□□□ -1.19
RNU6-41P-201ENST00000384741 PABPN1Q86U42 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
RNU6-41P-201ENST00000384741 FAM163AQ96GL9 167 aaPredicted RBP7.59□□□□□ -1.19
RNU6-41P-201ENST00000384741 CDAN1Q8IWY9 1227 aa7.55□□□□□ -1.2
RNU6-41P-201ENST00000384741 METRNQ9UJH8 293 aa7.55□□□□□ -1.2
RNU6-41P-201ENST00000384741 MAMSTRQ6ZN01 415 aa7.54□□□□□ -1.2
RNU6-41P-201ENST00000384741 ATXN8OSP0DMR3 200 aa7.5□□□□□ -1.21
RNU6-41P-201ENST00000384741 PHF12Q96QT6 1004 aa7.5□□□□□ -1.21
RNU6-41P-201ENST00000384741 ASTLQ6HA08 431 aaPredicted RBP7.49□□□□□ -1.21
RNU6-41P-201ENST00000384741 C7P10643 843 aa7.48□□□□□ -1.21
RNU6-41P-201ENST00000384741 SLC39A7Q92504 469 aa7.48□□□□□ -1.21
RNU6-41P-201ENST00000384741 SCUBE2Q9NQ36 999 aa7.47□□□□□ -1.21
RNU6-41P-201ENST00000384741 MMRN1Q13201 1228 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms