RNA–Protein interactions for RNA: ENST00000384540.1

RNU6-601P-201, Transcript of RNA, U6 small nuclear 601, pseudogene, humanhuman

BASIC

Gene RNU6-601P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-601P-201ENST00000384540 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
RNU6-601P-201ENST00000384540 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
RNU6-601P-201ENST00000384540 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
RNU6-601P-201ENST00000384540 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
RNU6-601P-201ENST00000384540 FOXD1Q16676 465 aa14.75□□□□□ -0.05
RNU6-601P-201ENST00000384540 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
RNU6-601P-201ENST00000384540 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
RNU6-601P-201ENST00000384540 ADRA2BP18089 450 aa13.9□□□□□ -0.18
RNU6-601P-201ENST00000384540 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
RNU6-601P-201ENST00000384540 MSH5O43196 834 aa13.75□□□□□ -0.21
RNU6-601P-201ENST00000384540 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
RNU6-601P-201ENST00000384540 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
RNU6-601P-201ENST00000384540 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
RNU6-601P-201ENST00000384540 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
RNU6-601P-201ENST00000384540 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
RNU6-601P-201ENST00000384540 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
RNU6-601P-201ENST00000384540 HOXD11P31277 338 aaPredicted RBP12.25□□□□□ -0.45
RNU6-601P-201ENST00000384540 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
RNU6-601P-201ENST00000384540 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.45
RNU6-601P-201ENST00000384540 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
RNU6-601P-201ENST00000384540 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
RNU6-601P-201ENST00000384540 KCNA4P22459 653 aa11.99□□□□□ -0.49
RNU6-601P-201ENST00000384540 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
RNU6-601P-201ENST00000384540 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
RNU6-601P-201ENST00000384540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNU6-601P-201ENST00000384540 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
RNU6-601P-201ENST00000384540 C1QBPQ07021 282 aaKnown RBP11.59□□□□□ -0.55
RNU6-601P-201ENST00000384540 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
RNU6-601P-201ENST00000384540 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
RNU6-601P-201ENST00000384540 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
RNU6-601P-201ENST00000384540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.2□□□□□ -0.62
RNU6-601P-201ENST00000384540 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
RNU6-601P-201ENST00000384540 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
RNU6-601P-201ENST00000384540 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
RNU6-601P-201ENST00000384540 APLP2Q06481 763 aa11.16□□□□□ -0.62
RNU6-601P-201ENST00000384540 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
RNU6-601P-201ENST00000384540 CAPN15O75808 1086 aa11.14□□□□□ -0.63
RNU6-601P-201ENST00000384540 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
RNU6-601P-201ENST00000384540 DSG3P32926 999 aa11.06□□□□□ -0.64
RNU6-601P-201ENST00000384540 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
RNU6-601P-201ENST00000384540 ZBTB22O15209 634 aa11.04□□□□□ -0.64
RNU6-601P-201ENST00000384540 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
RNU6-601P-201ENST00000384540 ABCB7O75027 752 aa10.9□□□□□ -0.66
RNU6-601P-201ENST00000384540 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
RNU6-601P-201ENST00000384540 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
RNU6-601P-201ENST00000384540 POLA2Q14181 598 aa10.76□□□□□ -0.69
RNU6-601P-201ENST00000384540 CSRNP3Q8WYN3 585 aa10.72□□□□□ -0.69
RNU6-601P-201ENST00000384540 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
RNU6-601P-201ENST00000384540 ZBTB12Q9Y330 459 aaPredicted RBP10.62□□□□□ -0.71
RNU6-601P-201ENST00000384540 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
RNU6-601P-201ENST00000384540 OSCARQ8IYS5 282 aa10.44□□□□□ -0.74
RNU6-601P-201ENST00000384540 FBLN2P98095 1184 aa10.43□□□□□ -0.74
RNU6-601P-201ENST00000384540 MKRN4PQ13434 485 aaPredicted RBP10.38□□□□□ -0.75
RNU6-601P-201ENST00000384540 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
RNU6-601P-201ENST00000384540 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
RNU6-601P-201ENST00000384540 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
RNU6-601P-201ENST00000384540 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
RNU6-601P-201ENST00000384540 POTEHQ6S545 545 aa10.25□□□□□ -0.77
RNU6-601P-201ENST00000384540 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
RNU6-601P-201ENST00000384540 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
RNU6-601P-201ENST00000384540 SSUH2Q9Y2M2 353 aa10.2□□□□□ -0.78
RNU6-601P-201ENST00000384540 ZNF692Q9BU19 519 aaPredicted RBP10.17□□□□□ -0.78
RNU6-601P-201ENST00000384540 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
RNU6-601P-201ENST00000384540 SPDYE1Q8NFV5 336 aaPredicted RBP10.06□□□□□ -0.8
RNU6-601P-201ENST00000384540 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNU6-601P-201ENST00000384540 PIP4P2Q8N4L2 257 aa10.03□□□□□ -0.8
RNU6-601P-201ENST00000384540 FXR2P51116 673 aaKnown RBP eCLIP10.02□□□□□ -0.81
RNU6-601P-201ENST00000384540 SPDYE4A6NLX3 237 aa9.99□□□□□ -0.81
RNU6-601P-201ENST00000384540 CLEC11AQ9Y240 323 aa9.99□□□□□ -0.81
RNU6-601P-201ENST00000384540 PRR29P0C7W0 189 aa9.87□□□□□ -0.83
RNU6-601P-201ENST00000384540 PRKAR2AP13861 404 aaKnown RBP9.86□□□□□ -0.83
RNU6-601P-201ENST00000384540 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
RNU6-601P-201ENST00000384540 PROM2Q8N271 834 aa9.83□□□□□ -0.84
RNU6-601P-201ENST00000384540 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
RNU6-601P-201ENST00000384540 HAX1O00165 279 aa9.75□□□□□ -0.85
RNU6-601P-201ENST00000384540 SP7Q8TDD2 431 aaPredicted RBP9.72□□□□□ -0.85
RNU6-601P-201ENST00000384540 FKBP8Q14318 412 aa9.7□□□□□ -0.86
RNU6-601P-201ENST00000384540 CREBZFQ9NS37 354 aa9.7□□□□□ -0.86
RNU6-601P-201ENST00000384540 C19orf67A6NJJ6 358 aa9.69□□□□□ -0.86
RNU6-601P-201ENST00000384540 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
RNU6-601P-201ENST00000384540 EVX2Q03828 476 aa9.65□□□□□ -0.86
RNU6-601P-201ENST00000384540 CD44P16070 742 aaKnown RBP9.57□□□□□ -0.88
RNU6-601P-201ENST00000384540 MNX1P50219 401 aaPredicted RBP9.57□□□□□ -0.88
RNU6-601P-201ENST00000384540 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
RNU6-601P-201ENST00000384540 PLEKHG5O94827 1062 aa9.48□□□□□ -0.89
RNU6-601P-201ENST00000384540 GABBR2O75899 941 aa9.47□□□□□ -0.89
RNU6-601P-201ENST00000384540 MIER1Q8N108 512 aa9.47□□□□□ -0.89
RNU6-601P-201ENST00000384540 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
RNU6-601P-201ENST00000384540 ZRANB1Q9UGI0 708 aa9.46□□□□□ -0.9
RNU6-601P-201ENST00000384540 FBXO3Q9UK99 471 aa9.46□□□□□ -0.9
RNU6-601P-201ENST00000384540 CLCN6P51797 869 aa9.45□□□□□ -0.9
RNU6-601P-201ENST00000384540 PAK3O75914 559 aaPredicted RBP9.44□□□□□ -0.9
RNU6-601P-201ENST00000384540 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
RNU6-601P-201ENST00000384540 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
RNU6-601P-201ENST00000384540 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
RNU6-601P-201ENST00000384540 VASPP50552 380 aaPredicted RBP9.34□□□□□ -0.91
RNU6-601P-201ENST00000384540 RASEFQ8IZ41 740 aa9.33□□□□□ -0.92
RNU6-601P-201ENST00000384540 TSPYL2Q9H2G4 693 aaPredicted RBP9.33□□□□□ -0.92
RNU6-601P-201ENST00000384540 CCDC61Q9Y6R9 512 aa9.32□□□□□ -0.92
RNU6-601P-201ENST00000384540 NUBP1P53384 320 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms