RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
RNU6-549P-201ENST00000384433 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
RNU6-549P-201ENST00000384433 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
RNU6-549P-201ENST00000384433 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
RNU6-549P-201ENST00000384433 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
RNU6-549P-201ENST00000384433 FOXD1Q16676 465 aa15.89■□□□□ 0.13
RNU6-549P-201ENST00000384433 PPP6R1Q9UPN7 881 aa15.7■□□□□ 0.1
RNU6-549P-201ENST00000384433 ADRA2BP18089 450 aa15.69■□□□□ 0.1
RNU6-549P-201ENST00000384433 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
RNU6-549P-201ENST00000384433 KCNA4P22459 653 aa14.91□□□□□ -0.02
RNU6-549P-201ENST00000384433 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
RNU6-549P-201ENST00000384433 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
RNU6-549P-201ENST00000384433 MSH5O43196 834 aa14.31□□□□□ -0.12
RNU6-549P-201ENST00000384433 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
RNU6-549P-201ENST00000384433 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
RNU6-549P-201ENST00000384433 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
RNU6-549P-201ENST00000384433 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
RNU6-549P-201ENST00000384433 CNKSR2Q8WXI2 1034 aa14.12□□□□□ -0.15
RNU6-549P-201ENST00000384433 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
RNU6-549P-201ENST00000384433 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
RNU6-549P-201ENST00000384433 ZBTB22O15209 634 aa13.78□□□□□ -0.2
RNU6-549P-201ENST00000384433 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
RNU6-549P-201ENST00000384433 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
RNU6-549P-201ENST00000384433 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
RNU6-549P-201ENST00000384433 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
RNU6-549P-201ENST00000384433 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
RNU6-549P-201ENST00000384433 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
RNU6-549P-201ENST00000384433 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
RNU6-549P-201ENST00000384433 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
RNU6-549P-201ENST00000384433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.34
RNU6-549P-201ENST00000384433 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
RNU6-549P-201ENST00000384433 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
RNU6-549P-201ENST00000384433 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
RNU6-549P-201ENST00000384433 SAMD1Q6SPF0 538 aaPredicted RBP12.66□□□□□ -0.38
RNU6-549P-201ENST00000384433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
RNU6-549P-201ENST00000384433 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
RNU6-549P-201ENST00000384433 FKBP8Q14318 412 aa12.59□□□□□ -0.39
RNU6-549P-201ENST00000384433 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
RNU6-549P-201ENST00000384433 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
RNU6-549P-201ENST00000384433 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
RNU6-549P-201ENST00000384433 RNF39Q9H2S5 420 aa12.4□□□□□ -0.42
RNU6-549P-201ENST00000384433 APLP2Q06481 763 aa12.35□□□□□ -0.43
RNU6-549P-201ENST00000384433 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
RNU6-549P-201ENST00000384433 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
RNU6-549P-201ENST00000384433 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
RNU6-549P-201ENST00000384433 CAPN15O75808 1086 aa12.25□□□□□ -0.45
RNU6-549P-201ENST00000384433 POLA2Q14181 598 aa12.22□□□□□ -0.45
RNU6-549P-201ENST00000384433 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
RNU6-549P-201ENST00000384433 ABCB7O75027 752 aa12.13□□□□□ -0.47
RNU6-549P-201ENST00000384433 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
RNU6-549P-201ENST00000384433 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
RNU6-549P-201ENST00000384433 FBLN2P98095 1184 aa12.07□□□□□ -0.48
RNU6-549P-201ENST00000384433 PROM2Q8N271 834 aa11.99□□□□□ -0.49
RNU6-549P-201ENST00000384433 DSG3P32926 999 aa11.98□□□□□ -0.49
RNU6-549P-201ENST00000384433 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
RNU6-549P-201ENST00000384433 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
RNU6-549P-201ENST00000384433 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
RNU6-549P-201ENST00000384433 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
RNU6-549P-201ENST00000384433 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
RNU6-549P-201ENST00000384433 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
RNU6-549P-201ENST00000384433 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
RNU6-549P-201ENST00000384433 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
RNU6-549P-201ENST00000384433 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
RNU6-549P-201ENST00000384433 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
RNU6-549P-201ENST00000384433 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
RNU6-549P-201ENST00000384433 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
RNU6-549P-201ENST00000384433 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNU6-549P-201ENST00000384433 PKD2Q13563 968 aa11.53□□□□□ -0.56
RNU6-549P-201ENST00000384433 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
RNU6-549P-201ENST00000384433 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
RNU6-549P-201ENST00000384433 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
RNU6-549P-201ENST00000384433 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
RNU6-549P-201ENST00000384433 MIER1Q8N108 512 aa11.44□□□□□ -0.58
RNU6-549P-201ENST00000384433 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
RNU6-549P-201ENST00000384433 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
RNU6-549P-201ENST00000384433 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
RNU6-549P-201ENST00000384433 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
RNU6-549P-201ENST00000384433 RGL2O15211 777 aa11.26□□□□□ -0.61
RNU6-549P-201ENST00000384433 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNU6-549P-201ENST00000384433 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
RNU6-549P-201ENST00000384433 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
RNU6-549P-201ENST00000384433 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
RNU6-549P-201ENST00000384433 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
RNU6-549P-201ENST00000384433 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
RNU6-549P-201ENST00000384433 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
RNU6-549P-201ENST00000384433 CREBZFQ9NS37 354 aa11.18□□□□□ -0.62
RNU6-549P-201ENST00000384433 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
RNU6-549P-201ENST00000384433 NUBP1P53384 320 aa11.15□□□□□ -0.62
RNU6-549P-201ENST00000384433 PRR29P0C7W0 189 aa11.14□□□□□ -0.63
RNU6-549P-201ENST00000384433 HAP1P54257 671 aaPredicted RBP11.14□□□□□ -0.63
RNU6-549P-201ENST00000384433 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
RNU6-549P-201ENST00000384433 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
RNU6-549P-201ENST00000384433 BBXQ8WY36 941 aaPredicted RBP11.09□□□□□ -0.63
RNU6-549P-201ENST00000384433 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
RNU6-549P-201ENST00000384433 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
RNU6-549P-201ENST00000384433 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
RNU6-549P-201ENST00000384433 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
RNU6-549P-201ENST00000384433 GSE1Q14687 1217 aa11.03□□□□□ -0.64
RNU6-549P-201ENST00000384433 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
RNU6-549P-201ENST00000384433 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms