RNA–Protein interactions for RNA: ENST00000384253.1

RNU6-662P-201, Transcript of RNA, U6 small nuclear 662, pseudogene, humanhuman

BASIC

Gene RNU6-662P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-662P-201ENST00000384253 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
RNU6-662P-201ENST00000384253 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
RNU6-662P-201ENST00000384253 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
RNU6-662P-201ENST00000384253 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
RNU6-662P-201ENST00000384253 FOXD1Q16676 465 aa16.2■□□□□ 0.18
RNU6-662P-201ENST00000384253 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
RNU6-662P-201ENST00000384253 MSH5O43196 834 aa15.25■□□□□ 0.03
RNU6-662P-201ENST00000384253 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
RNU6-662P-201ENST00000384253 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.05
RNU6-662P-201ENST00000384253 ADRA2BP18089 450 aa14.66□□□□□ -0.06
RNU6-662P-201ENST00000384253 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
RNU6-662P-201ENST00000384253 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
RNU6-662P-201ENST00000384253 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
RNU6-662P-201ENST00000384253 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
RNU6-662P-201ENST00000384253 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
RNU6-662P-201ENST00000384253 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
RNU6-662P-201ENST00000384253 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
RNU6-662P-201ENST00000384253 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
RNU6-662P-201ENST00000384253 C1QBPQ07021 282 aaKnown RBP12.75□□□□□ -0.37
RNU6-662P-201ENST00000384253 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
RNU6-662P-201ENST00000384253 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
RNU6-662P-201ENST00000384253 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
RNU6-662P-201ENST00000384253 DNAJC5BQ9UF47 199 aa12.42□□□□□ -0.42
RNU6-662P-201ENST00000384253 POTEHQ6S545 545 aa12.38□□□□□ -0.43
RNU6-662P-201ENST00000384253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.23□□□□□ -0.45
RNU6-662P-201ENST00000384253 DSG3P32926 999 aa12.03□□□□□ -0.48
RNU6-662P-201ENST00000384253 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
RNU6-662P-201ENST00000384253 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
RNU6-662P-201ENST00000384253 CAPN15O75808 1086 aa11.94□□□□□ -0.5
RNU6-662P-201ENST00000384253 NCBP3Q53F19 620 aaKnown RBP11.93□□□□□ -0.5
RNU6-662P-201ENST00000384253 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
RNU6-662P-201ENST00000384253 ABCB7O75027 752 aa11.67□□□□□ -0.54
RNU6-662P-201ENST00000384253 TRHP20396 242 aaPredicted RBP11.63□□□□□ -0.55
RNU6-662P-201ENST00000384253 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
RNU6-662P-201ENST00000384253 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
RNU6-662P-201ENST00000384253 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
RNU6-662P-201ENST00000384253 APLP2Q06481 763 aa11.37□□□□□ -0.59
RNU6-662P-201ENST00000384253 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
RNU6-662P-201ENST00000384253 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
RNU6-662P-201ENST00000384253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.26□□□□□ -0.61
RNU6-662P-201ENST00000384253 HNRNPUL2Q1KMD3 747 aaKnown RBP11.26□□□□□ -0.61
RNU6-662P-201ENST00000384253 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.61
RNU6-662P-201ENST00000384253 POLA2Q14181 598 aa11.19□□□□□ -0.62
RNU6-662P-201ENST00000384253 KCNA4P22459 653 aa11.18□□□□□ -0.62
RNU6-662P-201ENST00000384253 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
RNU6-662P-201ENST00000384253 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
RNU6-662P-201ENST00000384253 HAX1O00165 279 aa11.01□□□□□ -0.65
RNU6-662P-201ENST00000384253 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
RNU6-662P-201ENST00000384253 EVX2Q03828 476 aa10.95□□□□□ -0.66
RNU6-662P-201ENST00000384253 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
RNU6-662P-201ENST00000384253 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
RNU6-662P-201ENST00000384253 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
RNU6-662P-201ENST00000384253 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
RNU6-662P-201ENST00000384253 OSCARQ8IYS5 282 aa10.86□□□□□ -0.67
RNU6-662P-201ENST00000384253 ZBTB12Q9Y330 459 aaPredicted RBP10.77□□□□□ -0.69
RNU6-662P-201ENST00000384253 LHX8Q68G74 356 aa10.62□□□□□ -0.71
RNU6-662P-201ENST00000384253 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
RNU6-662P-201ENST00000384253 GABBR2O75899 941 aa10.58□□□□□ -0.72
RNU6-662P-201ENST00000384253 C19orf67A6NJJ6 358 aa10.57□□□□□ -0.72
RNU6-662P-201ENST00000384253 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.73
RNU6-662P-201ENST00000384253 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
RNU6-662P-201ENST00000384253 SPDYE2BA6NHP3 402 aa10.45□□□□□ -0.74
RNU6-662P-201ENST00000384253 SPDYE6P0CI01 402 aa10.45□□□□□ -0.74
RNU6-662P-201ENST00000384253 SPDYE2Q495Y8 402 aa10.45□□□□□ -0.74
RNU6-662P-201ENST00000384253 PLSCR2Q9NRY7 297 aa10.44□□□□□ -0.74
RNU6-662P-201ENST00000384253 CHADLQ6NUI6 762 aa10.42□□□□□ -0.74
RNU6-662P-201ENST00000384253 POTEIP0CG38 1075 aa10.41□□□□□ -0.74
RNU6-662P-201ENST00000384253 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
RNU6-662P-201ENST00000384253 SLC4A1APQ9BWU0 796 aaKnown RBP10.37□□□□□ -0.75
RNU6-662P-201ENST00000384253 ZBTB22O15209 634 aa10.31□□□□□ -0.76
RNU6-662P-201ENST00000384253 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
RNU6-662P-201ENST00000384253 FBLN2P98095 1184 aa10.3□□□□□ -0.76
RNU6-662P-201ENST00000384253 SSUH2Q9Y2M2 353 aa10.29□□□□□ -0.76
RNU6-662P-201ENST00000384253 ZNF692Q9BU19 519 aaPredicted RBP10.28□□□□□ -0.76
RNU6-662P-201ENST00000384253 CD44P16070 742 aaKnown RBP10.21□□□□□ -0.77
RNU6-662P-201ENST00000384253 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
RNU6-662P-201ENST00000384253 ATXN8OSP0DMR3 200 aa10.2□□□□□ -0.78
RNU6-662P-201ENST00000384253 PABPN1Q86U42 306 aaKnown RBP eCLIP10.13□□□□□ -0.79
RNU6-662P-201ENST00000384253 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
RNU6-662P-201ENST00000384253 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
RNU6-662P-201ENST00000384253 OTUD5Q96G74 571 aa10.1□□□□□ -0.79
RNU6-662P-201ENST00000384253 POTEB2H3BUK9 544 aa10.07□□□□□ -0.8
RNU6-662P-201ENST00000384253 POTEMA6NI47 508 aa10.04□□□□□ -0.8
RNU6-662P-201ENST00000384253 CLCN6P51797 869 aa10.04□□□□□ -0.8
RNU6-662P-201ENST00000384253 ZNF579Q8NAF0 562 aaKnown RBP10□□□□□ -0.81
RNU6-662P-201ENST00000384253 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
RNU6-662P-201ENST00000384253 POTEGQ6S5H5 508 aa9.99□□□□□ -0.81
RNU6-662P-201ENST00000384253 ZRANB1Q9UGI0 708 aa9.98□□□□□ -0.81
RNU6-662P-201ENST00000384253 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
RNU6-662P-201ENST00000384253 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
RNU6-662P-201ENST00000384253 POTEJP0CG39 1038 aa9.84□□□□□ -0.83
RNU6-662P-201ENST00000384253 PHF12Q96QT6 1004 aa9.84□□□□□ -0.83
RNU6-662P-201ENST00000384253 LCE2DQ5TA82 110 aaPredicted RBP9.81□□□□□ -0.84
RNU6-662P-201ENST00000384253 PCDH10Q9P2E7 1040 aa9.79□□□□□ -0.84
RNU6-662P-201ENST00000384253 METRNQ9UJH8 293 aa9.73□□□□□ -0.85
RNU6-662P-201ENST00000384253 FAM163AQ96GL9 167 aaPredicted RBP9.71□□□□□ -0.86
RNU6-662P-201ENST00000384253 ASTLQ6HA08 431 aaPredicted RBP9.69□□□□□ -0.86
RNU6-662P-201ENST00000384253 ATMINO43313 823 aaPredicted RBP9.68□□□□□ -0.86
RNU6-662P-201ENST00000384253 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
RNU6-662P-201ENST00000384253 MS4A3Q96HJ5 214 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms