RNA–Protein interactions for RNA: ENST00000384204.1

RNU6-1042P-201, Transcript of RNA, U6 small nuclear 1042, pseudogene, humanhuman

BASIC

Gene RNU6-1042P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1042P-201ENST00000384204 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
RNU6-1042P-201ENST00000384204 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
RNU6-1042P-201ENST00000384204 PHF23Q9BUL5 403 aaPredicted RBP20.27■□□□□ 0.84
RNU6-1042P-201ENST00000384204 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
RNU6-1042P-201ENST00000384204 FOXD1Q16676 465 aa18.78■□□□□ 0.6
RNU6-1042P-201ENST00000384204 PLPPR3Q6T4P5 718 aa18.46■□□□□ 0.55
RNU6-1042P-201ENST00000384204 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
RNU6-1042P-201ENST00000384204 ADRA2BP18089 450 aa17.82■□□□□ 0.44
RNU6-1042P-201ENST00000384204 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
RNU6-1042P-201ENST00000384204 MSH5O43196 834 aa17.3■□□□□ 0.36
RNU6-1042P-201ENST00000384204 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
RNU6-1042P-201ENST00000384204 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
RNU6-1042P-201ENST00000384204 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
RNU6-1042P-201ENST00000384204 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
RNU6-1042P-201ENST00000384204 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
RNU6-1042P-201ENST00000384204 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
RNU6-1042P-201ENST00000384204 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
RNU6-1042P-201ENST00000384204 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
RNU6-1042P-201ENST00000384204 KCNA4P22459 653 aa15.66■□□□□ 0.1
RNU6-1042P-201ENST00000384204 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
RNU6-1042P-201ENST00000384204 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
RNU6-1042P-201ENST00000384204 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
RNU6-1042P-201ENST00000384204 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
RNU6-1042P-201ENST00000384204 RNF39Q9H2S5 420 aa14.9□□□□□ -0.02
RNU6-1042P-201ENST00000384204 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
RNU6-1042P-201ENST00000384204 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
RNU6-1042P-201ENST00000384204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
RNU6-1042P-201ENST00000384204 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
RNU6-1042P-201ENST00000384204 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
RNU6-1042P-201ENST00000384204 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
RNU6-1042P-201ENST00000384204 ZBTB22O15209 634 aa14.49□□□□□ -0.09
RNU6-1042P-201ENST00000384204 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
RNU6-1042P-201ENST00000384204 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
RNU6-1042P-201ENST00000384204 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
RNU6-1042P-201ENST00000384204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
RNU6-1042P-201ENST00000384204 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
RNU6-1042P-201ENST00000384204 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
RNU6-1042P-201ENST00000384204 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
RNU6-1042P-201ENST00000384204 CAPN15O75808 1086 aa14.1□□□□□ -0.15
RNU6-1042P-201ENST00000384204 APLP2Q06481 763 aa14.09□□□□□ -0.15
RNU6-1042P-201ENST00000384204 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
RNU6-1042P-201ENST00000384204 DSG3P32926 999 aa14.08□□□□□ -0.16
RNU6-1042P-201ENST00000384204 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
RNU6-1042P-201ENST00000384204 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
RNU6-1042P-201ENST00000384204 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
RNU6-1042P-201ENST00000384204 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
RNU6-1042P-201ENST00000384204 ABCB7O75027 752 aa13.87□□□□□ -0.19
RNU6-1042P-201ENST00000384204 POLA2Q14181 598 aa13.78□□□□□ -0.2
RNU6-1042P-201ENST00000384204 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
RNU6-1042P-201ENST00000384204 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
RNU6-1042P-201ENST00000384204 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
RNU6-1042P-201ENST00000384204 FBLN2P98095 1184 aa13.29□□□□□ -0.28
RNU6-1042P-201ENST00000384204 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
RNU6-1042P-201ENST00000384204 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
RNU6-1042P-201ENST00000384204 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
RNU6-1042P-201ENST00000384204 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
RNU6-1042P-201ENST00000384204 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
RNU6-1042P-201ENST00000384204 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
RNU6-1042P-201ENST00000384204 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
RNU6-1042P-201ENST00000384204 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
RNU6-1042P-201ENST00000384204 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
RNU6-1042P-201ENST00000384204 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
RNU6-1042P-201ENST00000384204 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
RNU6-1042P-201ENST00000384204 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
RNU6-1042P-201ENST00000384204 PROM2Q8N271 834 aa12.87□□□□□ -0.35
RNU6-1042P-201ENST00000384204 POTEHQ6S545 545 aa12.77□□□□□ -0.37
RNU6-1042P-201ENST00000384204 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
RNU6-1042P-201ENST00000384204 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
RNU6-1042P-201ENST00000384204 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
RNU6-1042P-201ENST00000384204 FKBP8Q14318 412 aa12.68□□□□□ -0.38
RNU6-1042P-201ENST00000384204 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
RNU6-1042P-201ENST00000384204 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
RNU6-1042P-201ENST00000384204 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
RNU6-1042P-201ENST00000384204 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
RNU6-1042P-201ENST00000384204 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
RNU6-1042P-201ENST00000384204 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
RNU6-1042P-201ENST00000384204 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
RNU6-1042P-201ENST00000384204 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
RNU6-1042P-201ENST00000384204 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
RNU6-1042P-201ENST00000384204 EVX2Q03828 476 aa12.33□□□□□ -0.44
RNU6-1042P-201ENST00000384204 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
RNU6-1042P-201ENST00000384204 HAX1O00165 279 aa12.24□□□□□ -0.45
RNU6-1042P-201ENST00000384204 MIER1Q8N108 512 aa12.2□□□□□ -0.46
RNU6-1042P-201ENST00000384204 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
RNU6-1042P-201ENST00000384204 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
RNU6-1042P-201ENST00000384204 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
RNU6-1042P-201ENST00000384204 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
RNU6-1042P-201ENST00000384204 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
RNU6-1042P-201ENST00000384204 NUBP1P53384 320 aa12.08□□□□□ -0.48
RNU6-1042P-201ENST00000384204 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
RNU6-1042P-201ENST00000384204 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
RNU6-1042P-201ENST00000384204 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
RNU6-1042P-201ENST00000384204 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
RNU6-1042P-201ENST00000384204 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
RNU6-1042P-201ENST00000384204 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
RNU6-1042P-201ENST00000384204 GABBR2O75899 941 aa12□□□□□ -0.49
RNU6-1042P-201ENST00000384204 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
RNU6-1042P-201ENST00000384204 PHF12Q96QT6 1004 aa11.93□□□□□ -0.5
RNU6-1042P-201ENST00000384204 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
RNU6-1042P-201ENST00000384204 CLCN6P51797 869 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms