RNA–Protein interactions for RNA: ENST00000384114.1

RNU6-409P-201, Transcript of RNA, U6 small nuclear 409, pseudogene, humanhuman

BASIC

Gene RNU6-409P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-409P-201ENST00000384114 AEBP2Q6ZN18 517 aaPredicted RBP12.15□□□□□ -0.46
RNU6-409P-201ENST00000384114 CHIC1Q5VXU3 224 aa11.23□□□□□ -0.61
RNU6-409P-201ENST00000384114 POTEDQ86YR6 584 aa11.06□□□□□ -0.64
RNU6-409P-201ENST00000384114 SENP3Q9H4L4 574 aaPredicted RBP10.43□□□□□ -0.74
RNU6-409P-201ENST00000384114 PHF23Q9BUL5 403 aaPredicted RBP10.19□□□□□ -0.78
RNU6-409P-201ENST00000384114 FOXD1Q16676 465 aa9.9□□□□□ -0.82
RNU6-409P-201ENST00000384114 MSH5O43196 834 aa9.57□□□□□ -0.88
RNU6-409P-201ENST00000384114 PIAS4Q8N2W9 510 aaPredicted RBP8.98□□□□□ -0.97
RNU6-409P-201ENST00000384114 CACNB1Q02641 598 aaPredicted RBP8.82□□□□□ -1
RNU6-409P-201ENST00000384114 PPP6R1Q9UPN7 881 aa8.54□□□□□ -1.04
RNU6-409P-201ENST00000384114 POTEHQ6S545 545 aa8.45□□□□□ -1.06
RNU6-409P-201ENST00000384114 ADRA2BP18089 450 aa8.43□□□□□ -1.06
RNU6-409P-201ENST00000384114 PLPPR3Q6T4P5 718 aa8.22□□□□□ -1.09
RNU6-409P-201ENST00000384114 DMRT2Q9Y5R5 561 aa8.14□□□□□ -1.11
RNU6-409P-201ENST00000384114 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
RNU6-409P-201ENST00000384114 MAPK8IP2Q13387 824 aaPredicted RBP8.06□□□□□ -1.12
RNU6-409P-201ENST00000384114 C1QBPQ07021 282 aaKnown RBP7.91□□□□□ -1.14
RNU6-409P-201ENST00000384114 DCAF8L1A6NGE4 600 aa7.85□□□□□ -1.15
RNU6-409P-201ENST00000384114 SCAF1Q9H7N4 1312 aaKnown RBP7.62□□□□□ -1.19
RNU6-409P-201ENST00000384114 HOXD11P31277 338 aaPredicted RBP7.46□□□□□ -1.22
RNU6-409P-201ENST00000384114 SP7Q8TDD2 431 aaPredicted RBP7.46□□□□□ -1.22
RNU6-409P-201ENST00000384114 PLSCR2Q9NRY7 297 aa7.38□□□□□ -1.23
RNU6-409P-201ENST00000384114 DNAJC5BQ9UF47 199 aa7.36□□□□□ -1.23
RNU6-409P-201ENST00000384114 DSG3P32926 999 aa7.28□□□□□ -1.24
RNU6-409P-201ENST00000384114 CHRDL2Q6WN34 429 aa7.19□□□□□ -1.26
RNU6-409P-201ENST00000384114 PPP4R3CPQ6ZMV5 832 aa7.16□□□□□ -1.26
RNU6-409P-201ENST00000384114 RNF216Q9NWF9 866 aaPredicted RBP7.13□□□□□ -1.27
RNU6-409P-201ENST00000384114 CNKSR2Q8WXI2 1034 aa7.1□□□□□ -1.27
RNU6-409P-201ENST00000384114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU6-409P-201ENST00000384114 SPINK5Q9NQ38 1064 aaPredicted RBP7.08□□□□□ -1.28
RNU6-409P-201ENST00000384114 CAPN15O75808 1086 aa7.06□□□□□ -1.28
RNU6-409P-201ENST00000384114 LHX8Q68G74 356 aa6.99□□□□□ -1.29
RNU6-409P-201ENST00000384114 HAX1O00165 279 aa6.94□□□□□ -1.3
RNU6-409P-201ENST00000384114 RBM42Q9BTD8 480 aaKnown RBP6.9□□□□□ -1.3
RNU6-409P-201ENST00000384114 U3KPZ7 1027 aaPredicted RBP6.87□□□□□ -1.31
RNU6-409P-201ENST00000384114 EVX2Q03828 476 aa6.86□□□□□ -1.31
RNU6-409P-201ENST00000384114 ABCB7O75027 752 aa6.85□□□□□ -1.31
RNU6-409P-201ENST00000384114 PIP4P2Q8N4L2 257 aa6.82□□□□□ -1.32
RNU6-409P-201ENST00000384114 NCBP3Q53F19 620 aaKnown RBP6.77□□□□□ -1.33
RNU6-409P-201ENST00000384114 TRHP20396 242 aaPredicted RBP6.72□□□□□ -1.33
RNU6-409P-201ENST00000384114 NPM3O75607 178 aaKnown RBP6.71□□□□□ -1.34
RNU6-409P-201ENST00000384114 POTEMA6NI47 508 aa6.63□□□□□ -1.35
RNU6-409P-201ENST00000384114 ZNF219Q9P2Y4 722 aaPredicted RBP6.63□□□□□ -1.35
RNU6-409P-201ENST00000384114 FXR2P51116 673 aaKnown RBP eCLIP6.62□□□□□ -1.35
RNU6-409P-201ENST00000384114 GABBR2O75899 941 aa6.59□□□□□ -1.35
RNU6-409P-201ENST00000384114 POTEGQ6S5H5 508 aa6.58□□□□□ -1.36
RNU6-409P-201ENST00000384114 AKT1S1Q96B36 256 aa6.56□□□□□ -1.36
RNU6-409P-201ENST00000384114 REM2Q8IYK8 340 aaPredicted RBP6.54□□□□□ -1.36
RNU6-409P-201ENST00000384114 PCDH10Q9P2E7 1040 aa6.52□□□□□ -1.37
RNU6-409P-201ENST00000384114 SLC4A2P04920 1241 aa6.51□□□□□ -1.37
RNU6-409P-201ENST00000384114 PITPNM1O00562 1244 aa6.49□□□□□ -1.37
RNU6-409P-201ENST00000384114 POTEIP0CG38 1075 aa6.48□□□□□ -1.37
RNU6-409P-201ENST00000384114 APLP2Q06481 763 aa6.47□□□□□ -1.37
RNU6-409P-201ENST00000384114 C19orf67A6NJJ6 358 aa6.44□□□□□ -1.38
RNU6-409P-201ENST00000384114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.42□□□□□ -1.38
RNU6-409P-201ENST00000384114 HNRNPUL2Q1KMD3 747 aaKnown RBP6.42□□□□□ -1.38
RNU6-409P-201ENST00000384114 OTUD5Q96G74 571 aa6.41□□□□□ -1.38
RNU6-409P-201ENST00000384114 SAMD1Q6SPF0 538 aaPredicted RBP6.37□□□□□ -1.39
RNU6-409P-201ENST00000384114 POLA2Q14181 598 aa6.34□□□□□ -1.39
RNU6-409P-201ENST00000384114 KCNA4P22459 653 aa6.32□□□□□ -1.4
RNU6-409P-201ENST00000384114 PRKAR2AP13861 404 aaKnown RBP6.29□□□□□ -1.4
RNU6-409P-201ENST00000384114 POTEB2H3BUK9 544 aa6.26□□□□□ -1.41
RNU6-409P-201ENST00000384114 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
RNU6-409P-201ENST00000384114 MYCNP04198 464 aaPredicted RBP6.2□□□□□ -1.42
RNU6-409P-201ENST00000384114 OSCARQ8IYS5 282 aa6.18□□□□□ -1.42
RNU6-409P-201ENST00000384114 DCBLD2Q96PD2 775 aa6.17□□□□□ -1.42
RNU6-409P-201ENST00000384114 FAM163AQ96GL9 167 aaPredicted RBP6.12□□□□□ -1.43
RNU6-409P-201ENST00000384114 ZBTB12Q9Y330 459 aaPredicted RBP6.12□□□□□ -1.43
RNU6-409P-201ENST00000384114 CDAN1Q8IWY9 1227 aa6.11□□□□□ -1.43
RNU6-409P-201ENST00000384114 ATF5Q9Y2D1 282 aaPredicted RBP6.11□□□□□ -1.43
RNU6-409P-201ENST00000384114 MMRN1Q13201 1228 aa6.08□□□□□ -1.44
RNU6-409P-201ENST00000384114 CLCN6P51797 869 aa6.07□□□□□ -1.44
RNU6-409P-201ENST00000384114 CHADLQ6NUI6 762 aa6.04□□□□□ -1.44
RNU6-409P-201ENST00000384114 CD44P16070 742 aaKnown RBP6.03□□□□□ -1.44
RNU6-409P-201ENST00000384114 POTEJP0CG39 1038 aa6.02□□□□□ -1.45
RNU6-409P-201ENST00000384114 CLEC11AQ9Y240 323 aa6.01□□□□□ -1.45
RNU6-409P-201ENST00000384114 SPNS2Q8IVW8 549 aa5.99□□□□□ -1.45
RNU6-409P-201ENST00000384114 FOXD4L1Q9NU39 408 aa5.97□□□□□ -1.45
RNU6-409P-201ENST00000384114 SPDYE1Q8NFV5 336 aaPredicted RBP5.95□□□□□ -1.46
RNU6-409P-201ENST00000384114 SPDYE2BA6NHP3 402 aa5.93□□□□□ -1.46
RNU6-409P-201ENST00000384114 SPDYE6P0CI01 402 aa5.93□□□□□ -1.46
RNU6-409P-201ENST00000384114 SPDYE2Q495Y8 402 aa5.93□□□□□ -1.46
RNU6-409P-201ENST00000384114 GALR2O43603 387 aaPredicted RBP5.92□□□□□ -1.46
RNU6-409P-201ENST00000384114 PELP1Q8IZL8 1130 aaKnown RBP5.92□□□□□ -1.46
RNU6-409P-201ENST00000384114 MAMSTRQ6ZN01 415 aa5.9□□□□□ -1.46
RNU6-409P-201ENST00000384114 ZNF579Q8NAF0 562 aaKnown RBP5.89□□□□□ -1.47
RNU6-409P-201ENST00000384114 SLC4A1APQ9BWU0 796 aaKnown RBP5.87□□□□□ -1.47
RNU6-409P-201ENST00000384114 ATXN8OSP0DMR3 200 aa5.84□□□□□ -1.47
RNU6-409P-201ENST00000384114 METRNQ9UJH8 293 aa5.84□□□□□ -1.47
RNU6-409P-201ENST00000384114 SSUH2Q9Y2M2 353 aa5.84□□□□□ -1.47
RNU6-409P-201ENST00000384114 ZBTB22O15209 634 aa5.83□□□□□ -1.48
RNU6-409P-201ENST00000384114 FBLN2P98095 1184 aa5.83□□□□□ -1.48
RNU6-409P-201ENST00000384114 FARP1Q9Y4F1 1045 aaPredicted RBP5.83□□□□□ -1.48
RNU6-409P-201ENST00000384114 SCUBE2Q9NQ36 999 aa5.82□□□□□ -1.48
RNU6-409P-201ENST00000384114 MKRN4PQ13434 485 aaPredicted RBP5.81□□□□□ -1.48
RNU6-409P-201ENST00000384114 ZNF692Q9BU19 519 aaPredicted RBP5.8□□□□□ -1.48
RNU6-409P-201ENST00000384114 ZRANB1Q9UGI0 708 aa5.79□□□□□ -1.48
RNU6-409P-201ENST00000384114 PRR29P0C7W0 189 aa5.76□□□□□ -1.49
RNU6-409P-201ENST00000384114 C7P10643 843 aa5.76□□□□□ -1.49
RNU6-409P-201ENST00000384114 ST18O60284 1047 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms