RNA–Protein interactions for RNA: ENST00000383888.1

RNU6-338P-201, Transcript of RNA, U6 small nuclear 338, pseudogene, humanhuman

BASIC

Gene RNU6-338P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-338P-201ENST00000383888 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
RNU6-338P-201ENST00000383888 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
RNU6-338P-201ENST00000383888 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
RNU6-338P-201ENST00000383888 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
RNU6-338P-201ENST00000383888 FOXD1Q16676 465 aa14.94□□□□□ -0.02
RNU6-338P-201ENST00000383888 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
RNU6-338P-201ENST00000383888 MSH5O43196 834 aa14.14□□□□□ -0.15
RNU6-338P-201ENST00000383888 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
RNU6-338P-201ENST00000383888 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
RNU6-338P-201ENST00000383888 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
RNU6-338P-201ENST00000383888 ADRA2BP18089 450 aa13.7□□□□□ -0.22
RNU6-338P-201ENST00000383888 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
RNU6-338P-201ENST00000383888 DMRT2Q9Y5R5 561 aa12.66□□□□□ -0.38
RNU6-338P-201ENST00000383888 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
RNU6-338P-201ENST00000383888 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
RNU6-338P-201ENST00000383888 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
RNU6-338P-201ENST00000383888 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
RNU6-338P-201ENST00000383888 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
RNU6-338P-201ENST00000383888 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
RNU6-338P-201ENST00000383888 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
RNU6-338P-201ENST00000383888 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
RNU6-338P-201ENST00000383888 C1QBPQ07021 282 aaKnown RBP11.86□□□□□ -0.51
RNU6-338P-201ENST00000383888 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
RNU6-338P-201ENST00000383888 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.54
RNU6-338P-201ENST00000383888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.56
RNU6-338P-201ENST00000383888 NPM3O75607 178 aaKnown RBP11.41□□□□□ -0.58
RNU6-338P-201ENST00000383888 U3KPZ7 1027 aaPredicted RBP11.22□□□□□ -0.61
RNU6-338P-201ENST00000383888 CAPN15O75808 1086 aa11.17□□□□□ -0.62
RNU6-338P-201ENST00000383888 DSG3P32926 999 aa11.15□□□□□ -0.62
RNU6-338P-201ENST00000383888 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
RNU6-338P-201ENST00000383888 POTEHQ6S545 545 aa11.09□□□□□ -0.63
RNU6-338P-201ENST00000383888 APLP2Q06481 763 aa10.99□□□□□ -0.65
RNU6-338P-201ENST00000383888 SLC4A2P04920 1241 aa10.95□□□□□ -0.66
RNU6-338P-201ENST00000383888 KCNA4P22459 653 aa10.95□□□□□ -0.66
RNU6-338P-201ENST00000383888 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
RNU6-338P-201ENST00000383888 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
RNU6-338P-201ENST00000383888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
RNU6-338P-201ENST00000383888 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
RNU6-338P-201ENST00000383888 ABCB7O75027 752 aa10.85□□□□□ -0.67
RNU6-338P-201ENST00000383888 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
RNU6-338P-201ENST00000383888 RBM42Q9BTD8 480 aaKnown RBP10.7□□□□□ -0.7
RNU6-338P-201ENST00000383888 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
RNU6-338P-201ENST00000383888 POLA2Q14181 598 aa10.58□□□□□ -0.72
RNU6-338P-201ENST00000383888 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
RNU6-338P-201ENST00000383888 ZBTB12Q9Y330 459 aaPredicted RBP10.39□□□□□ -0.75
RNU6-338P-201ENST00000383888 AKT1S1Q96B36 256 aa10.38□□□□□ -0.75
RNU6-338P-201ENST00000383888 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
RNU6-338P-201ENST00000383888 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
RNU6-338P-201ENST00000383888 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
RNU6-338P-201ENST00000383888 REM2Q8IYK8 340 aaPredicted RBP10.27□□□□□ -0.77
RNU6-338P-201ENST00000383888 SP7Q8TDD2 431 aaPredicted RBP10.27□□□□□ -0.77
RNU6-338P-201ENST00000383888 OSCARQ8IYS5 282 aa10.21□□□□□ -0.77
RNU6-338P-201ENST00000383888 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
RNU6-338P-201ENST00000383888 HAX1O00165 279 aa10.13□□□□□ -0.79
RNU6-338P-201ENST00000383888 PITPNM1O00562 1244 aa10.13□□□□□ -0.79
RNU6-338P-201ENST00000383888 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNU6-338P-201ENST00000383888 ATXN8OSP0DMR3 200 aa10.08□□□□□ -0.8
RNU6-338P-201ENST00000383888 ZBTB22O15209 634 aa10.03□□□□□ -0.8
RNU6-338P-201ENST00000383888 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.81
RNU6-338P-201ENST00000383888 SPDYE6P0CI01 402 aa10.02□□□□□ -0.81
RNU6-338P-201ENST00000383888 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
RNU6-338P-201ENST00000383888 FBLN2P98095 1184 aa10.01□□□□□ -0.81
RNU6-338P-201ENST00000383888 EVX2Q03828 476 aa9.92□□□□□ -0.82
RNU6-338P-201ENST00000383888 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
RNU6-338P-201ENST00000383888 PRKAR2AP13861 404 aaKnown RBP9.89□□□□□ -0.83
RNU6-338P-201ENST00000383888 CLEC11AQ9Y240 323 aa9.89□□□□□ -0.83
RNU6-338P-201ENST00000383888 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
RNU6-338P-201ENST00000383888 SSUH2Q9Y2M2 353 aa9.83□□□□□ -0.84
RNU6-338P-201ENST00000383888 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
RNU6-338P-201ENST00000383888 C19orf67A6NJJ6 358 aa9.8□□□□□ -0.84
RNU6-338P-201ENST00000383888 GABBR2O75899 941 aa9.72□□□□□ -0.85
RNU6-338P-201ENST00000383888 PRR29P0C7W0 189 aa9.71□□□□□ -0.86
RNU6-338P-201ENST00000383888 CHADLQ6NUI6 762 aa9.69□□□□□ -0.86
RNU6-338P-201ENST00000383888 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
RNU6-338P-201ENST00000383888 LHX8Q68G74 356 aa9.64□□□□□ -0.87
RNU6-338P-201ENST00000383888 CLCN6P51797 869 aa9.57□□□□□ -0.88
RNU6-338P-201ENST00000383888 CD44P16070 742 aaKnown RBP9.56□□□□□ -0.88
RNU6-338P-201ENST00000383888 FARP1Q9Y4F1 1045 aaPredicted RBP9.56□□□□□ -0.88
RNU6-338P-201ENST00000383888 POTEIP0CG38 1075 aa9.48□□□□□ -0.89
RNU6-338P-201ENST00000383888 DCBLD2Q96PD2 775 aa9.45□□□□□ -0.9
RNU6-338P-201ENST00000383888 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
RNU6-338P-201ENST00000383888 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
RNU6-338P-201ENST00000383888 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
RNU6-338P-201ENST00000383888 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
RNU6-338P-201ENST00000383888 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
RNU6-338P-201ENST00000383888 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
RNU6-338P-201ENST00000383888 SPDYE4A6NLX3 237 aa9.28□□□□□ -0.92
RNU6-338P-201ENST00000383888 GALR2O43603 387 aaPredicted RBP9.28□□□□□ -0.92
RNU6-338P-201ENST00000383888 NPM1P06748 294 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU6-338P-201ENST00000383888 PLSCR2Q9NRY7 297 aa9.23□□□□□ -0.93
RNU6-338P-201ENST00000383888 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
RNU6-338P-201ENST00000383888 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
RNU6-338P-201ENST00000383888 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
RNU6-338P-201ENST00000383888 POTEB2H3BUK9 544 aa9.16□□□□□ -0.94
RNU6-338P-201ENST00000383888 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
RNU6-338P-201ENST00000383888 ASTLQ6HA08 431 aaPredicted RBP9.1□□□□□ -0.95
RNU6-338P-201ENST00000383888 C7P10643 843 aa9.09□□□□□ -0.95
RNU6-338P-201ENST00000383888 EHMT2Q96KQ7 1210 aa9.09□□□□□ -0.95
RNU6-338P-201ENST00000383888 POTEMA6NI47 508 aa9.08□□□□□ -0.96
RNU6-338P-201ENST00000383888 SLC39A7Q92504 469 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms