RNA–Protein interactions for RNA: ENST00000382254.5

CDH12-201, Transcript of cadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH12, Length 4,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-201ENST00000382254 NISCHQ9Y2I1 1504 aa13.19□□□□□ -0.3
CDH12-201ENST00000382254 SUPT5HO00267 1087 aaKnown RBP12.43□□□□□ -0.42
CDH12-201ENST00000382254 DCAF8L2P0C7V8 631 aa12.43□□□□□ -0.42
CDH12-201ENST00000382254 SHROOM4Q9ULL8 1493 aa12.32□□□□□ -0.44
CDH12-201ENST00000382254 PCGF6Q9BYE7 350 aa12□□□□□ -0.49
CDH12-201ENST00000382254 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
CDH12-201ENST00000382254 HRCP23327 699 aa11.73□□□□□ -0.53
CDH12-201ENST00000382254 FAM9AQ8IZU1 332 aaPredicted RBP11.65□□□□□ -0.54
CDH12-201ENST00000382254 PPARGC1BQ86YN6 1023 aaKnown RBP11.59□□□□□ -0.55
CDH12-201ENST00000382254 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
CDH12-201ENST00000382254 ZEB1P37275 1124 aaPredicted RBP11.54□□□□□ -0.56
CDH12-201ENST00000382254 CHIC1Q5VXU3 224 aa11.52□□□□□ -0.57
CDH12-201ENST00000382254 TTBK1Q5TCY1 1321 aaPredicted RBP11.5□□□□□ -0.57
CDH12-201ENST00000382254 LOC105371045A0A1W2PR82 267 aa11.46□□□□□ -0.58
CDH12-201ENST00000382254 TRIM26Q12899 539 aaPredicted RBP11.44□□□□□ -0.58
CDH12-201ENST00000382254 CENPBP07199 599 aaPredicted RBP11.44□□□□□ -0.58
CDH12-201ENST00000382254 TRIM41Q8WV44 630 aa11.43□□□□□ -0.58
CDH12-201ENST00000382254 CCER1Q8TC90 406 aaPredicted RBP11.42□□□□□ -0.58
CDH12-201ENST00000382254 YTHDC1Q96MU7 727 aaKnown RBP11.28□□□□□ -0.6
CDH12-201ENST00000382254 APLP2Q06481 763 aa11.26□□□□□ -0.61
CDH12-201ENST00000382254 MYT1Q01538 1121 aa11.22□□□□□ -0.61
CDH12-201ENST00000382254 RANGAP1P46060 587 aaPredicted RBP11.14□□□□□ -0.63
CDH12-201ENST00000382254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.12□□□□□ -0.63
CDH12-201ENST00000382254 UBTFP17480 764 aaKnown RBP11.12□□□□□ -0.63
CDH12-201ENST00000382254 MYO15BQ96JP2 1530 aa11.09□□□□□ -0.63
CDH12-201ENST00000382254 DIEXFQ68CQ4 756 aaKnown RBP11.06□□□□□ -0.64
CDH12-201ENST00000382254 ZCCHC6Q5VYS8 1495 aaKnown RBP11.05□□□□□ -0.64
CDH12-201ENST00000382254 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
CDH12-201ENST00000382254 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.65
CDH12-201ENST00000382254 ERICH6Q7L0X2 663 aa10.95□□□□□ -0.66
CDH12-201ENST00000382254 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
CDH12-201ENST00000382254 SCAF1Q9H7N4 1312 aaKnown RBP10.92□□□□□ -0.66
CDH12-201ENST00000382254 DCAF1Q9Y4B6 1507 aa10.91□□□□□ -0.66
CDH12-201ENST00000382254 NEFLP07196 543 aa10.91□□□□□ -0.66
CDH12-201ENST00000382254 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
CDH12-201ENST00000382254 ATP1B4Q9UN42 357 aaPredicted RBP10.83□□□□□ -0.68
CDH12-201ENST00000382254 ITGAEP38570 1179 aa10.81□□□□□ -0.68
CDH12-201ENST00000382254 ZNF316A6NFI3 1004 aaPredicted RBP10.79□□□□□ -0.68
CDH12-201ENST00000382254 ABCC9O60706 1549 aa10.76□□□□□ -0.69
CDH12-201ENST00000382254 CCDC180Q9P1Z9 1646 aa10.75□□□□□ -0.69
CDH12-201ENST00000382254 BCANQ96GW7 911 aa10.71□□□□□ -0.69
CDH12-201ENST00000382254 SCRIBQ14160 1630 aa10.7□□□□□ -0.7
CDH12-201ENST00000382254 RSF1Q96T23 1441 aaPredicted RBP10.64□□□□□ -0.71
CDH12-201ENST00000382254 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDH12-201ENST00000382254 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
CDH12-201ENST00000382254 MIER1Q8N108 512 aa10.58□□□□□ -0.72
CDH12-201ENST00000382254 CNGB1Q14028 1251 aaPredicted RBP10.55□□□□□ -0.72
CDH12-201ENST00000382254 POLR3GLQ9BT43 218 aa10.51□□□□□ -0.73
CDH12-201ENST00000382254 FAM50AQ14320 339 aaKnown RBP10.5□□□□□ -0.73
CDH12-201ENST00000382254 FKBP8Q14318 412 aa10.47□□□□□ -0.73
CDH12-201ENST00000382254 ANP32CO43423 234 aa10.46□□□□□ -0.73
CDH12-201ENST00000382254 CECR2Q9BXF3 1484 aa10.45□□□□□ -0.74
CDH12-201ENST00000382254 RB1CC1Q8TDY2 1594 aa10.45□□□□□ -0.74
CDH12-201ENST00000382254 CLSPNQ9HAW4 1339 aa10.44□□□□□ -0.74
CDH12-201ENST00000382254 CDK11AQ9UQ88 783 aaPredicted RBP10.43□□□□□ -0.74
CDH12-201ENST00000382254 RTL5Q5HYW3 569 aaPredicted RBP10.42□□□□□ -0.74
CDH12-201ENST00000382254 DDX10Q13206 875 aaKnown RBP10.4□□□□□ -0.75
CDH12-201ENST00000382254 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
CDH12-201ENST00000382254 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
CDH12-201ENST00000382254 TRIM52Q96A61 297 aa10.36□□□□□ -0.75
CDH12-201ENST00000382254 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
CDH12-201ENST00000382254 ANP32EQ9BTT0 268 aa10.31□□□□□ -0.76
CDH12-201ENST00000382254 SOGA1O94964 1423 aa10.31□□□□□ -0.76
CDH12-201ENST00000382254 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
CDH12-201ENST00000382254 HNRNPUQ00839 825 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDH12-201ENST00000382254 SUPT16HQ9Y5B9 1047 aaKnown RBP10.29□□□□□ -0.76
CDH12-201ENST00000382254 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
CDH12-201ENST00000382254 HIRIP3Q9BW71 556 aaPredicted RBP10.29□□□□□ -0.76
CDH12-201ENST00000382254 CLIP1P30622 1438 aa10.29□□□□□ -0.76
CDH12-201ENST00000382254 TNIKQ9UKE5 1360 aa10.28□□□□□ -0.76
CDH12-201ENST00000382254 IRX6P78412 446 aaPredicted RBP10.26□□□□□ -0.77
CDH12-201ENST00000382254 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
CDH12-201ENST00000382254 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
CDH12-201ENST00000382254 GOLGA3Q08378 1498 aa10.24□□□□□ -0.77
CDH12-201ENST00000382254 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
CDH12-201ENST00000382254 WRNQ14191 1432 aaPredicted RBP eCLIP10.22□□□□□ -0.77
CDH12-201ENST00000382254 NACADO15069 1562 aa10.22□□□□□ -0.77
CDH12-201ENST00000382254 WIZO95785 1651 aa10.22□□□□□ -0.77
CDH12-201ENST00000382254 ANP32AP39687 249 aaKnown RBP10.21□□□□□ -0.78
CDH12-201ENST00000382254 TONSLQ96HA7 1378 aa10.21□□□□□ -0.78
CDH12-201ENST00000382254 EEA1Q15075 1411 aa10.21□□□□□ -0.78
CDH12-201ENST00000382254 FAM9BQ8IZU0 186 aa10.2□□□□□ -0.78
CDH12-201ENST00000382254 NBR1Q14596 966 aa10.2□□□□□ -0.78
CDH12-201ENST00000382254 NPM2Q86SE8 214 aaKnown RBP10.2□□□□□ -0.78
CDH12-201ENST00000382254 BAZ1AQ9NRL2 1556 aaPredicted RBP10.19□□□□□ -0.78
CDH12-201ENST00000382254 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
CDH12-201ENST00000382254 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
CDH12-201ENST00000382254 RUSC2Q8N2Y8 1516 aa10.14□□□□□ -0.79
CDH12-201ENST00000382254 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
CDH12-201ENST00000382254 ARID3CA6NKF2 412 aa10.13□□□□□ -0.79
CDH12-201ENST00000382254 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
CDH12-201ENST00000382254 CCDC136Q96JN2 1154 aa10.11□□□□□ -0.79
CDH12-201ENST00000382254 SIN3AQ96ST3 1273 aa10.11□□□□□ -0.79
CDH12-201ENST00000382254 MRS2Q9HD23 443 aa10.11□□□□□ -0.79
CDH12-201ENST00000382254 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
CDH12-201ENST00000382254 KANK4Q5T7N3 995 aaPredicted RBP10.1□□□□□ -0.79
CDH12-201ENST00000382254 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
CDH12-201ENST00000382254 SALL2Q9Y467 1007 aaPredicted RBP10.08□□□□□ -0.8
CDH12-201ENST00000382254 CHIC2Q9UKJ5 165 aa10.07□□□□□ -0.8
CDH12-201ENST00000382254 EIF5BO60841 1220 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms