RNA–Protein interactions for RNA: ENST00000382043.8

NIN-204, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 4,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-204ENST00000382043 NISCHQ9Y2I1 1504 aa12.92□□□□□ -0.34
NIN-204ENST00000382043 DCAF8L2P0C7V8 631 aa12.8□□□□□ -0.36
NIN-204ENST00000382043 SHROOM4Q9ULL8 1493 aa12.09□□□□□ -0.47
NIN-204ENST00000382043 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
NIN-204ENST00000382043 EHMT2Q96KQ7 1210 aa11.58□□□□□ -0.56
NIN-204ENST00000382043 FAM9AQ8IZU1 332 aaPredicted RBP11.34□□□□□ -0.59
NIN-204ENST00000382043 ABCC9O60706 1549 aa11.18□□□□□ -0.62
NIN-204ENST00000382043 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
NIN-204ENST00000382043 TTBK1Q5TCY1 1321 aaPredicted RBP11.1□□□□□ -0.63
NIN-204ENST00000382043 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
NIN-204ENST00000382043 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
NIN-204ENST00000382043 APLP2Q06481 763 aa10.98□□□□□ -0.65
NIN-204ENST00000382043 PCGF6Q9BYE7 350 aa10.95□□□□□ -0.66
NIN-204ENST00000382043 UBTFP17480 764 aaKnown RBP10.92□□□□□ -0.66
NIN-204ENST00000382043 CHIC1Q5VXU3 224 aa10.86□□□□□ -0.67
NIN-204ENST00000382043 ATP1B4Q9UN42 357 aaPredicted RBP10.86□□□□□ -0.67
NIN-204ENST00000382043 PPARGC1BQ86YN6 1023 aaKnown RBP10.85□□□□□ -0.67
NIN-204ENST00000382043 LOC105371045A0A1W2PR82 267 aa10.85□□□□□ -0.67
NIN-204ENST00000382043 ZCCHC6Q5VYS8 1495 aaKnown RBP10.7□□□□□ -0.7
NIN-204ENST00000382043 SCRIBQ14160 1630 aa10.63□□□□□ -0.71
NIN-204ENST00000382043 CCER1Q8TC90 406 aaPredicted RBP10.63□□□□□ -0.71
NIN-204ENST00000382043 CCDC180Q9P1Z9 1646 aa10.6□□□□□ -0.71
NIN-204ENST00000382043 ITGAEP38570 1179 aa10.54□□□□□ -0.72
NIN-204ENST00000382043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
NIN-204ENST00000382043 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
NIN-204ENST00000382043 TRIM26Q12899 539 aaPredicted RBP10.5□□□□□ -0.73
NIN-204ENST00000382043 ZEB1P37275 1124 aaPredicted RBP10.4□□□□□ -0.74
NIN-204ENST00000382043 FBLN2P98095 1184 aa10.4□□□□□ -0.74
NIN-204ENST00000382043 RB1CC1Q8TDY2 1594 aa10.35□□□□□ -0.75
NIN-204ENST00000382043 CSRNP3Q8WYN3 585 aa10.35□□□□□ -0.75
NIN-204ENST00000382043 P3H3Q8IVL6 736 aa10.34□□□□□ -0.75
NIN-204ENST00000382043 MYT1LQ9UL68 1186 aa10.34□□□□□ -0.75
NIN-204ENST00000382043 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
NIN-204ENST00000382043 ARID3CA6NKF2 412 aa10.3□□□□□ -0.76
NIN-204ENST00000382043 NACADO15069 1562 aa10.29□□□□□ -0.76
NIN-204ENST00000382043 HRCP23327 699 aa10.29□□□□□ -0.76
NIN-204ENST00000382043 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
NIN-204ENST00000382043 CECR2Q9BXF3 1484 aa10.26□□□□□ -0.77
NIN-204ENST00000382043 YTHDC1Q96MU7 727 aaKnown RBP10.25□□□□□ -0.77
NIN-204ENST00000382043 POLR3GLQ9BT43 218 aa10.18□□□□□ -0.78
NIN-204ENST00000382043 CNGB1Q14028 1251 aaPredicted RBP10.18□□□□□ -0.78
NIN-204ENST00000382043 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
NIN-204ENST00000382043 CENPBP07199 599 aaPredicted RBP10.14□□□□□ -0.79
NIN-204ENST00000382043 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
NIN-204ENST00000382043 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
NIN-204ENST00000382043 BAZ1BQ9UIG0 1483 aaKnown RBP10.12□□□□□ -0.79
NIN-204ENST00000382043 MYO15BQ96JP2 1530 aa10.11□□□□□ -0.79
NIN-204ENST00000382043 MROH2BQ7Z745 1585 aa10.08□□□□□ -0.8
NIN-204ENST00000382043 PELP1Q8IZL8 1130 aaKnown RBP10.07□□□□□ -0.8
NIN-204ENST00000382043 ZNF777Q9ULD5 760 aaPredicted RBP10.07□□□□□ -0.8
NIN-204ENST00000382043 BAZ1AQ9NRL2 1556 aaPredicted RBP10.07□□□□□ -0.8
NIN-204ENST00000382043 WRNQ14191 1432 aaPredicted RBP eCLIP10.04□□□□□ -0.8
NIN-204ENST00000382043 ZNF326Q5BKZ1 582 aaKnown RBP10.02□□□□□ -0.81
NIN-204ENST00000382043 CHMP7Q8WUX9 453 aaPredicted RBP10.02□□□□□ -0.81
NIN-204ENST00000382043 DIEXFQ68CQ4 756 aaKnown RBP9.99□□□□□ -0.81
NIN-204ENST00000382043 CDK11AQ9UQ88 783 aaPredicted RBP9.96□□□□□ -0.81
NIN-204ENST00000382043 CHIC2Q9UKJ5 165 aa9.96□□□□□ -0.82
NIN-204ENST00000382043 CLIP1P30622 1438 aa9.96□□□□□ -0.82
NIN-204ENST00000382043 CCDC88BA6NC98 1476 aa9.95□□□□□ -0.82
NIN-204ENST00000382043 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
NIN-204ENST00000382043 SOGA1O94964 1423 aa9.94□□□□□ -0.82
NIN-204ENST00000382043 NEFLP07196 543 aa9.92□□□□□ -0.82
NIN-204ENST00000382043 WIZO95785 1651 aa9.91□□□□□ -0.82
NIN-204ENST00000382043 CEP162Q5TB80 1403 aa9.91□□□□□ -0.82
NIN-204ENST00000382043 ABCC8Q09428 1581 aa9.9□□□□□ -0.82
NIN-204ENST00000382043 KIF27Q86VH2 1401 aa9.9□□□□□ -0.82
NIN-204ENST00000382043 ERCC6Q03468 1493 aa9.88□□□□□ -0.83
NIN-204ENST00000382043 MTUS2Q5JR59 1369 aa9.88□□□□□ -0.83
NIN-204ENST00000382043 GOLGA3Q08378 1498 aa9.87□□□□□ -0.83
NIN-204ENST00000382043 EEA1Q15075 1411 aa9.87□□□□□ -0.83
NIN-204ENST00000382043 NPM1P06748 294 aaKnown RBP eCLIP9.87□□□□□ -0.83
NIN-204ENST00000382043 KCNH8Q96L42 1107 aa9.86□□□□□ -0.83
NIN-204ENST00000382043 CUX2O14529 1486 aa9.84□□□□□ -0.83
NIN-204ENST00000382043 ZNF316A6NFI3 1004 aaPredicted RBP9.83□□□□□ -0.84
NIN-204ENST00000382043 ATAD2BQ9ULI0 1458 aa9.83□□□□□ -0.84
NIN-204ENST00000382043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.83□□□□□ -0.842e-6■■■□□ 16.6
NIN-204ENST00000382043 TNIKQ9UKE5 1360 aa9.83□□□□□ -0.84
NIN-204ENST00000382043 TDRD9Q8NDG6 1382 aaKnown RBP9.82□□□□□ -0.84
NIN-204ENST00000382043 SMARCA2P51531 1590 aa9.82□□□□□ -0.84
NIN-204ENST00000382043 PLPPR3Q6T4P5 718 aa9.82□□□□□ -0.84
NIN-204ENST00000382043 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
NIN-204ENST00000382043 CEP164Q9UPV0 1460 aa9.81□□□□□ -0.84
NIN-204ENST00000382043 CARMIL1Q5VZK9 1371 aa9.81□□□□□ -0.84
NIN-204ENST00000382043 TSPY4P0CV99 314 aa9.79□□□□□ -0.84
NIN-204ENST00000382043 TSPY10P0CW01 314 aa9.79□□□□□ -0.84
NIN-204ENST00000382043 CHGAP10645 457 aaKnown RBP9.79□□□□□ -0.84
NIN-204ENST00000382043 CADPSQ9ULU8 1353 aa9.78□□□□□ -0.84
NIN-204ENST00000382043 PLEKHD1A6NEE1 506 aa9.77□□□□□ -0.84
NIN-204ENST00000382043 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.84
NIN-204ENST00000382043 BCANQ96GW7 911 aa9.77□□□□□ -0.85
NIN-204ENST00000382043 SMARCA4P51532 1647 aa9.76□□□□□ -0.85
NIN-204ENST00000382043 HIRIP3Q9BW71 556 aaPredicted RBP9.76□□□□□ -0.85
NIN-204ENST00000382043 ANP32CO43423 234 aa9.75□□□□□ -0.85
NIN-204ENST00000382043 TONSLQ96HA7 1378 aa9.75□□□□□ -0.85
NIN-204ENST00000382043 SENP3Q9H4L4 574 aaPredicted RBP9.74□□□□□ -0.85
NIN-204ENST00000382043 PDS5BQ9NTI5 1447 aa9.74□□□□□ -0.85
NIN-204ENST00000382043 KDM2AQ9Y2K7 1162 aa9.73□□□□□ -0.85
NIN-204ENST00000382043 CFDP1Q9UEE9 299 aaPredicted RBP9.72□□□□□ -0.85
NIN-204ENST00000382043 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.85
NIN-204ENST00000382043 ESF1Q9H501 851 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms