RNA–Protein interactions for RNA: ENST00000381759.8

KDM4B-202, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 3,058 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-202ENST00000381759 NISCHQ9Y2I1 1504 aa40.15■■■■■ 4.02
KDM4B-202ENST00000381759 CCDC180Q9P1Z9 1646 aa34.46■■■■□ 3.11
KDM4B-202ENST00000381759 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
KDM4B-202ENST00000381759 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
KDM4B-202ENST00000381759 DCAF8L2P0C7V8 631 aa33.62■■■□□ 2.97
KDM4B-202ENST00000381759 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
KDM4B-202ENST00000381759 SUPT5HO00267 1087 aaKnown RBP32.73■■■□□ 2.83
KDM4B-202ENST00000381759 ABCC9O60706 1549 aa32.66■■■□□ 2.82
KDM4B-202ENST00000381759 MYO15BQ96JP2 1530 aa32.25■■■□□ 2.75
KDM4B-202ENST00000381759 SCRIBQ14160 1630 aa32.21■■■□□ 2.75
KDM4B-202ENST00000381759 NACADO15069 1562 aa32.07■■■□□ 2.72
KDM4B-202ENST00000381759 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
KDM4B-202ENST00000381759 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
KDM4B-202ENST00000381759 CHIC1Q5VXU3 224 aa31.4■■■□□ 2.62
KDM4B-202ENST00000381759 CECR2Q9BXF3 1484 aa31.39■■■□□ 2.61
KDM4B-202ENST00000381759 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
KDM4B-202ENST00000381759 MROH2BQ7Z745 1585 aa31.18■■■□□ 2.58
KDM4B-202ENST00000381759 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
KDM4B-202ENST00000381759 WIZO95785 1651 aa30.96■■■□□ 2.55
KDM4B-202ENST00000381759 BAZ1AQ9NRL2 1556 aaPredicted RBP30.89■■■□□ 2.54
KDM4B-202ENST00000381759 BICRAQ9NZM4 1560 aa30.87■■■□□ 2.53
KDM4B-202ENST00000381759 SMARCA4P51532 1647 aa30.72■■■□□ 2.51
KDM4B-202ENST00000381759 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
KDM4B-202ENST00000381759 LOC105371045A0A1W2PR82 267 aa30.47■■■□□ 2.47
KDM4B-202ENST00000381759 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
KDM4B-202ENST00000381759 CCDC88BA6NC98 1476 aa30.34■■■□□ 2.45
KDM4B-202ENST00000381759 FAM9AQ8IZU1 332 aaPredicted RBP30.28■■■□□ 2.44
KDM4B-202ENST00000381759 SMARCA2P51531 1590 aa30.27■■■□□ 2.44
KDM4B-202ENST00000381759 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
KDM4B-202ENST00000381759 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
KDM4B-202ENST00000381759 EIF4G1Q04637 1599 aaKnown RBP30.14■■■□□ 2.42
KDM4B-202ENST00000381759 EHMT2Q96KQ7 1210 aa30.06■■■□□ 2.4
KDM4B-202ENST00000381759 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
KDM4B-202ENST00000381759 ABCC8Q09428 1581 aa30■■■□□ 2.39
KDM4B-202ENST00000381759 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
KDM4B-202ENST00000381759 PCGF6Q9BYE7 350 aa29.65■■■□□ 2.34
KDM4B-202ENST00000381759 WRNQ14191 1432 aaPredicted RBP eCLIP29.61■■■□□ 2.334e-6■■■■■ 51
KDM4B-202ENST00000381759 HMGXB3Q12766 1538 aa29.6■■■□□ 2.33
KDM4B-202ENST00000381759 SOGA1O94964 1423 aa29.59■■■□□ 2.33
KDM4B-202ENST00000381759 RUSC2Q8N2Y8 1516 aa29.48■■■□□ 2.31
KDM4B-202ENST00000381759 SYNJ1O43426 1573 aa29.46■■■□□ 2.31
KDM4B-202ENST00000381759 CSRNP3Q8WYN3 585 aa29.38■■■□□ 2.29
KDM4B-202ENST00000381759 CC2D2AQ9P2K1 1620 aa29.37■■■□□ 2.29
KDM4B-202ENST00000381759 EEA1Q15075 1411 aa29.26■■■□□ 2.28
KDM4B-202ENST00000381759 TRIM26Q12899 539 aaPredicted RBP29.24■■■□□ 2.27
KDM4B-202ENST00000381759 CFTRP13569 1480 aa29.24■■■□□ 2.27
KDM4B-202ENST00000381759 UBTFP17480 764 aaKnown RBP29.22■■■□□ 2.27
KDM4B-202ENST00000381759 PPARGC1BQ86YN6 1023 aaKnown RBP29.17■■■□□ 2.26
KDM4B-202ENST00000381759 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
KDM4B-202ENST00000381759 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
KDM4B-202ENST00000381759 CUX1P39880 1505 aa29.07■■■□□ 2.24
KDM4B-202ENST00000381759 TNIKQ9UKE5 1360 aa29.07■■■□□ 2.24
KDM4B-202ENST00000381759 CEP162Q5TB80 1403 aa29.06■■■□□ 2.24
KDM4B-202ENST00000381759 HRCP23327 699 aa29.05■■■□□ 2.24
KDM4B-202ENST00000381759 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
KDM4B-202ENST00000381759 GOLGA3Q08378 1498 aa29.04■■■□□ 2.24
KDM4B-202ENST00000381759 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
KDM4B-202ENST00000381759 DNAJC5BQ9UF47 199 aa28.93■■■□□ 2.22
KDM4B-202ENST00000381759 RAPGEF2Q9Y4G8 1499 aa28.9■■■□□ 2.22
KDM4B-202ENST00000381759 PRDM2Q13029 1718 aa28.88■■■□□ 2.21
KDM4B-202ENST00000381759 KIF21BO75037 1637 aa28.88■■■□□ 2.21
KDM4B-202ENST00000381759 RANGAP1P46060 587 aaPredicted RBP28.88■■■□□ 2.21
KDM4B-202ENST00000381759 TTBK1Q5TCY1 1321 aaPredicted RBP28.87■■■□□ 2.21
KDM4B-202ENST00000381759 NESP48681 1621 aa28.86■■■□□ 2.21
KDM4B-202ENST00000381759 FANCD2Q9BXW9 1451 aa28.8■■■□□ 2.2
KDM4B-202ENST00000381759 KIF27Q86VH2 1401 aa28.77■■■□□ 2.2
KDM4B-202ENST00000381759 CLIP1P30622 1438 aa28.71■■■□□ 2.19
KDM4B-202ENST00000381759 FGD5Q6ZNL6 1462 aa28.69■■■□□ 2.18
KDM4B-202ENST00000381759 PRXQ9BXM0 1461 aa28.68■■■□□ 2.18
KDM4B-202ENST00000381759 CUX2O14529 1486 aa28.67■■■□□ 2.18
KDM4B-202ENST00000381759 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
KDM4B-202ENST00000381759 IGF1RP08069 1367 aa28.54■■■□□ 2.16
KDM4B-202ENST00000381759 LAMC3Q9Y6N6 1575 aa28.53■■■□□ 2.16
KDM4B-202ENST00000381759 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
KDM4B-202ENST00000381759 RAD54L2Q9Y4B4 1467 aa28.52■■■□□ 2.16
KDM4B-202ENST00000381759 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
KDM4B-202ENST00000381759 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
KDM4B-202ENST00000381759 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
KDM4B-202ENST00000381759 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
KDM4B-202ENST00000381759 URB2Q14146 1524 aaKnown RBP28.42■■■□□ 2.14
KDM4B-202ENST00000381759 CARMIL1Q5VZK9 1371 aa28.41■■■□□ 2.14
KDM4B-202ENST00000381759 APLP2Q06481 763 aa28.37■■■□□ 2.13
KDM4B-202ENST00000381759 ABCA10Q8WWZ4 1543 aa28.32■■■□□ 2.12
KDM4B-202ENST00000381759 ARAP1Q96P48 1450 aa28.31■■■□□ 2.12
KDM4B-202ENST00000381759 KIF21AQ7Z4S6 1674 aa28.3■■■□□ 2.12
KDM4B-202ENST00000381759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.29■■■□□ 2.12
KDM4B-202ENST00000381759 TDRD9Q8NDG6 1382 aaKnown RBP28.25■■■□□ 2.11
KDM4B-202ENST00000381759 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
KDM4B-202ENST00000381759 ZEB1P37275 1124 aaPredicted RBP28.2■■■□□ 2.11
KDM4B-202ENST00000381759 CCER1Q8TC90 406 aaPredicted RBP28.15■■■□□ 2.1
KDM4B-202ENST00000381759 P3H3Q8IVL6 736 aa28.12■■■□□ 2.09
KDM4B-202ENST00000381759 KANK4Q5T7N3 995 aaPredicted RBP28.12■■■□□ 2.09
KDM4B-202ENST00000381759 HNRNPUL2Q1KMD3 747 aaKnown RBP28.1■■■□□ 2.09
KDM4B-202ENST00000381759 WDR97A6NE52 1622 aa28.08■■■□□ 2.09
KDM4B-202ENST00000381759 GAPVD1Q14C86 1478 aa28.07■■■□□ 2.08
KDM4B-202ENST00000381759 MRC2Q9UBG0 1479 aa28■■■□□ 2.07
KDM4B-202ENST00000381759 CUL7Q14999 1698 aa28■■■□□ 2.07
KDM4B-202ENST00000381759 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
KDM4B-202ENST00000381759 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
KDM4B-202ENST00000381759 AQRO60306 1485 aaKnown RBP eCLIP27.93■■■□□ 2.062e-7■■■■□ 20.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms