RNA–Protein interactions for RNA: ENST00000380887.6

ESRRB-201, Transcript of estrogen related receptor beta, humanhuman

TSL 5 BASIC

Gene ESRRB, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRB-201ENST00000380887 NISCHQ9Y2I1 1504 aa28.17■■■□□ 2.1
ESRRB-201ENST00000380887 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
ESRRB-201ENST00000380887 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
ESRRB-201ENST00000380887 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
ESRRB-201ENST00000380887 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
ESRRB-201ENST00000380887 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
ESRRB-201ENST00000380887 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
ESRRB-201ENST00000380887 ABCC9O60706 1549 aa22.94■■□□□ 1.26
ESRRB-201ENST00000380887 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
ESRRB-201ENST00000380887 NACADO15069 1562 aa22.65■■□□□ 1.22
ESRRB-201ENST00000380887 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
ESRRB-201ENST00000380887 SCRIBQ14160 1630 aa22.52■■□□□ 1.2
ESRRB-201ENST00000380887 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.18
ESRRB-201ENST00000380887 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
ESRRB-201ENST00000380887 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
ESRRB-201ENST00000380887 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
ESRRB-201ENST00000380887 HRCP23327 699 aa21.91■■□□□ 1.1
ESRRB-201ENST00000380887 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
ESRRB-201ENST00000380887 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
ESRRB-201ENST00000380887 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
ESRRB-201ENST00000380887 PCGF6Q9BYE7 350 aa21.74■■□□□ 1.07
ESRRB-201ENST00000380887 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
ESRRB-201ENST00000380887 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
ESRRB-201ENST00000380887 WIZO95785 1651 aa21.65■■□□□ 1.06
ESRRB-201ENST00000380887 SMARCA4P51532 1647 aa21.58■■□□□ 1.05
ESRRB-201ENST00000380887 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
ESRRB-201ENST00000380887 TRIM26Q12899 539 aaPredicted RBP21.49■■□□□ 1.03
ESRRB-201ENST00000380887 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
ESRRB-201ENST00000380887 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
ESRRB-201ENST00000380887 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
ESRRB-201ENST00000380887 PPARGC1BQ86YN6 1023 aaKnown RBP21.23■□□□□ 0.99
ESRRB-201ENST00000380887 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
ESRRB-201ENST00000380887 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.99
ESRRB-201ENST00000380887 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
ESRRB-201ENST00000380887 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
ESRRB-201ENST00000380887 ZEB1P37275 1124 aaPredicted RBP21.13■□□□□ 0.97
ESRRB-201ENST00000380887 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
ESRRB-201ENST00000380887 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
ESRRB-201ENST00000380887 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
ESRRB-201ENST00000380887 HMGXB3Q12766 1538 aa20.89■□□□□ 0.94
ESRRB-201ENST00000380887 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
ESRRB-201ENST00000380887 EEA1Q15075 1411 aa20.88■□□□□ 0.93
ESRRB-201ENST00000380887 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
ESRRB-201ENST00000380887 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
ESRRB-201ENST00000380887 SOGA1O94964 1423 aa20.74■□□□□ 0.91
ESRRB-201ENST00000380887 CC2D2AQ9P2K1 1620 aa20.74■□□□□ 0.91
ESRRB-201ENST00000380887 CEP162Q5TB80 1403 aa20.73■□□□□ 0.91
ESRRB-201ENST00000380887 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
ESRRB-201ENST00000380887 GOLGA3Q08378 1498 aa20.64■□□□□ 0.89
ESRRB-201ENST00000380887 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
ESRRB-201ENST00000380887 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
ESRRB-201ENST00000380887 KIF21BO75037 1637 aa20.58■□□□□ 0.88
ESRRB-201ENST00000380887 CFTRP13569 1480 aa20.57■□□□□ 0.88
ESRRB-201ENST00000380887 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
ESRRB-201ENST00000380887 UBTFP17480 764 aaKnown RBP20.49■□□□□ 0.87
ESRRB-201ENST00000380887 CCER1Q8TC90 406 aaPredicted RBP20.48■□□□□ 0.87
ESRRB-201ENST00000380887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.46■□□□□ 0.87
ESRRB-201ENST00000380887 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
ESRRB-201ENST00000380887 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
ESRRB-201ENST00000380887 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
ESRRB-201ENST00000380887 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.86
ESRRB-201ENST00000380887 CUX1P39880 1505 aa20.37■□□□□ 0.85
ESRRB-201ENST00000380887 CLIP1P30622 1438 aa20.34■□□□□ 0.85
ESRRB-201ENST00000380887 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
ESRRB-201ENST00000380887 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
ESRRB-201ENST00000380887 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
ESRRB-201ENST00000380887 NESP48681 1621 aa20.26■□□□□ 0.83
ESRRB-201ENST00000380887 TTBK1Q5TCY1 1321 aaPredicted RBP20.26■□□□□ 0.83
ESRRB-201ENST00000380887 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
ESRRB-201ENST00000380887 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
ESRRB-201ENST00000380887 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
ESRRB-201ENST00000380887 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
ESRRB-201ENST00000380887 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
ESRRB-201ENST00000380887 APLP2Q06481 763 aa20.1■□□□□ 0.81
ESRRB-201ENST00000380887 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
ESRRB-201ENST00000380887 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
ESRRB-201ENST00000380887 KIF27Q86VH2 1401 aa20.07■□□□□ 0.8
ESRRB-201ENST00000380887 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
ESRRB-201ENST00000380887 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
ESRRB-201ENST00000380887 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
ESRRB-201ENST00000380887 ZNF316A6NFI3 1004 aaPredicted RBP20.02■□□□□ 0.79
ESRRB-201ENST00000380887 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
ESRRB-201ENST00000380887 CUX2O14529 1486 aa20■□□□□ 0.79
ESRRB-201ENST00000380887 ACIN1Q9UKV3 1341 aaKnown RBP19.99■□□□□ 0.79
ESRRB-201ENST00000380887 HNRNPUL2Q1KMD3 747 aaKnown RBP19.99■□□□□ 0.79
ESRRB-201ENST00000380887 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
ESRRB-201ENST00000380887 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
ESRRB-201ENST00000380887 IGF1RP08069 1367 aa19.95■□□□□ 0.78
ESRRB-201ENST00000380887 KIF21AQ7Z4S6 1674 aa19.95■□□□□ 0.78
ESRRB-201ENST00000380887 RAD54L2Q9Y4B4 1467 aa19.94■□□□□ 0.78
ESRRB-201ENST00000380887 CENPBP07199 599 aaPredicted RBP19.92■□□□□ 0.78
ESRRB-201ENST00000380887 PELP1Q8IZL8 1130 aaKnown RBP19.92■□□□□ 0.78
ESRRB-201ENST00000380887 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
ESRRB-201ENST00000380887 ABCA10Q8WWZ4 1543 aa19.89■□□□□ 0.77
ESRRB-201ENST00000380887 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
ESRRB-201ENST00000380887 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
ESRRB-201ENST00000380887 RRBP1Q9P2E9 1410 aaKnown RBP19.87■□□□□ 0.77
ESRRB-201ENST00000380887 ARHGAP35Q9NRY4 1499 aa19.86■□□□□ 0.77
ESRRB-201ENST00000380887 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
ESRRB-201ENST00000380887 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms