RNA–Protein interactions for RNA: ENST00000380158.8

RAP1GDS1-203, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

TSL 1 (best) BASIC

Gene RAP1GDS1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-203ENST00000380158 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
RAP1GDS1-203ENST00000380158 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
RAP1GDS1-203ENST00000380158 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
RAP1GDS1-203ENST00000380158 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
RAP1GDS1-203ENST00000380158 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
RAP1GDS1-203ENST00000380158 DCAF8L2P0C7V8 631 aa28.51■■■□□ 2.15
RAP1GDS1-203ENST00000380158 MYO15BQ96JP2 1530 aa28.35■■■□□ 2.13
RAP1GDS1-203ENST00000380158 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
RAP1GDS1-203ENST00000380158 NACADO15069 1562 aa27.9■■■□□ 2.06
RAP1GDS1-203ENST00000380158 ABCC9O60706 1549 aa27.77■■■□□ 2.04
RAP1GDS1-203ENST00000380158 SCRIBQ14160 1630 aa27.72■■■□□ 2.03
RAP1GDS1-203ENST00000380158 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
RAP1GDS1-203ENST00000380158 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
RAP1GDS1-203ENST00000380158 RSF1Q96T23 1441 aaPredicted RBP27.36■■□□□ 1.97
RAP1GDS1-203ENST00000380158 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
RAP1GDS1-203ENST00000380158 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
RAP1GDS1-203ENST00000380158 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
RAP1GDS1-203ENST00000380158 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.89
RAP1GDS1-203ENST00000380158 WIZO95785 1651 aa26.76■■□□□ 1.87
RAP1GDS1-203ENST00000380158 SMARCA4P51532 1647 aa26.67■■□□□ 1.86
RAP1GDS1-203ENST00000380158 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
RAP1GDS1-203ENST00000380158 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
RAP1GDS1-203ENST00000380158 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
RAP1GDS1-203ENST00000380158 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
RAP1GDS1-203ENST00000380158 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
RAP1GDS1-203ENST00000380158 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
RAP1GDS1-203ENST00000380158 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
RAP1GDS1-203ENST00000380158 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
RAP1GDS1-203ENST00000380158 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
RAP1GDS1-203ENST00000380158 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
RAP1GDS1-203ENST00000380158 BAZ1BQ9UIG0 1483 aaKnown RBP25.96■■□□□ 1.75
RAP1GDS1-203ENST00000380158 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.74
RAP1GDS1-203ENST00000380158 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
RAP1GDS1-203ENST00000380158 PCGF6Q9BYE7 350 aa25.91■■□□□ 1.74
RAP1GDS1-203ENST00000380158 EEA1Q15075 1411 aa25.82■■□□□ 1.72
RAP1GDS1-203ENST00000380158 HRCP23327 699 aa25.81■■□□□ 1.72
RAP1GDS1-203ENST00000380158 TRIM26Q12899 539 aaPredicted RBP25.81■■□□□ 1.72
RAP1GDS1-203ENST00000380158 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
RAP1GDS1-203ENST00000380158 NCAPD3P42695 1498 aa25.76■■□□□ 1.71
RAP1GDS1-203ENST00000380158 WRNQ14191 1432 aaPredicted RBP eCLIP25.74■■□□□ 1.71
RAP1GDS1-203ENST00000380158 SOGA1O94964 1423 aa25.61■■□□□ 1.69
RAP1GDS1-203ENST00000380158 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
RAP1GDS1-203ENST00000380158 CSRNP3Q8WYN3 585 aa25.54■■□□□ 1.68
RAP1GDS1-203ENST00000380158 TNIKQ9UKE5 1360 aa25.51■■□□□ 1.67
RAP1GDS1-203ENST00000380158 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
RAP1GDS1-203ENST00000380158 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
RAP1GDS1-203ENST00000380158 GOLGA3Q08378 1498 aa25.44■■□□□ 1.66
RAP1GDS1-203ENST00000380158 TOP2BQ02880 1626 aa25.44■■□□□ 1.66
RAP1GDS1-203ENST00000380158 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.66
RAP1GDS1-203ENST00000380158 CEP162Q5TB80 1403 aa25.39■■□□□ 1.65
RAP1GDS1-203ENST00000380158 KIF21BO75037 1637 aa25.38■■□□□ 1.65
RAP1GDS1-203ENST00000380158 CFTRP13569 1480 aa25.38■■□□□ 1.65
RAP1GDS1-203ENST00000380158 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
RAP1GDS1-203ENST00000380158 UBTFP17480 764 aaKnown RBP25.24■■□□□ 1.63
RAP1GDS1-203ENST00000380158 ZEB1P37275 1124 aaPredicted RBP25.21■■□□□ 1.63
RAP1GDS1-203ENST00000380158 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
RAP1GDS1-203ENST00000380158 CUX1P39880 1505 aa25.17■■□□□ 1.62
RAP1GDS1-203ENST00000380158 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
RAP1GDS1-203ENST00000380158 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
RAP1GDS1-203ENST00000380158 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
RAP1GDS1-203ENST00000380158 RAPGEF2Q9Y4G8 1499 aa25.07■■□□□ 1.6
RAP1GDS1-203ENST00000380158 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
RAP1GDS1-203ENST00000380158 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
RAP1GDS1-203ENST00000380158 CLIP1P30622 1438 aa25.04■■□□□ 1.6
RAP1GDS1-203ENST00000380158 PPARGC1BQ86YN6 1023 aaKnown RBP24.98■■□□□ 1.59
RAP1GDS1-203ENST00000380158 VPS8Q8N3P4 1428 aa24.95■■□□□ 1.58
RAP1GDS1-203ENST00000380158 FANCD2Q9BXW9 1451 aa24.84■■□□□ 1.57
RAP1GDS1-203ENST00000380158 FGD5Q6ZNL6 1462 aa24.79■■□□□ 1.56
RAP1GDS1-203ENST00000380158 CUX2O14529 1486 aa24.77■■□□□ 1.56
RAP1GDS1-203ENST00000380158 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
RAP1GDS1-203ENST00000380158 LAMC3Q9Y6N6 1575 aa24.75■■□□□ 1.55
RAP1GDS1-203ENST00000380158 IGF1RP08069 1367 aa24.73■■□□□ 1.55
RAP1GDS1-203ENST00000380158 APLP2Q06481 763 aa24.71■■□□□ 1.55
RAP1GDS1-203ENST00000380158 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
RAP1GDS1-203ENST00000380158 TOPBP1Q92547 1522 aa24.64■■□□□ 1.54
RAP1GDS1-203ENST00000380158 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
RAP1GDS1-203ENST00000380158 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
RAP1GDS1-203ENST00000380158 CCER1Q8TC90 406 aaPredicted RBP24.62■■□□□ 1.53
RAP1GDS1-203ENST00000380158 TTBK1Q5TCY1 1321 aaPredicted RBP24.61■■□□□ 1.53
RAP1GDS1-203ENST00000380158 NESP48681 1621 aa24.6■■□□□ 1.53
RAP1GDS1-203ENST00000380158 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
RAP1GDS1-203ENST00000380158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.58■■□□□ 1.53
RAP1GDS1-203ENST00000380158 ARHGAP35Q9NRY4 1499 aa24.56■■□□□ 1.52
RAP1GDS1-203ENST00000380158 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
RAP1GDS1-203ENST00000380158 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
RAP1GDS1-203ENST00000380158 CUL7Q14999 1698 aa24.48■■□□□ 1.51
RAP1GDS1-203ENST00000380158 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
RAP1GDS1-203ENST00000380158 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
RAP1GDS1-203ENST00000380158 MAP3K1Q13233 1512 aa24.44■■□□□ 1.5
RAP1GDS1-203ENST00000380158 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
RAP1GDS1-203ENST00000380158 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
RAP1GDS1-203ENST00000380158 ABCA5Q8WWZ7 1642 aa24.34■■□□□ 1.49
RAP1GDS1-203ENST00000380158 RRBP1Q9P2E9 1410 aaKnown RBP24.34■■□□□ 1.49
RAP1GDS1-203ENST00000380158 EFCAB5A4FU69 1503 aa24.34■■□□□ 1.49
RAP1GDS1-203ENST00000380158 KANK4Q5T7N3 995 aaPredicted RBP24.31■■□□□ 1.48
RAP1GDS1-203ENST00000380158 HNRNPUL2Q1KMD3 747 aaKnown RBP24.29■■□□□ 1.48
RAP1GDS1-203ENST00000380158 KIF21AQ7Z4S6 1674 aa24.28■■□□□ 1.48
RAP1GDS1-203ENST00000380158 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
RAP1GDS1-203ENST00000380158 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
RAP1GDS1-203ENST00000380158 CTTNBP2Q8WZ74 1663 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms