RNA–Protein interactions for RNA: ENST00000379834.6

RIOK1-202, Transcript of RIO kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIOK1, Length 2,810 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK1-202ENST00000379834 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.49
RIOK1-202ENST00000379834 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
RIOK1-202ENST00000379834 ZCCHC6Q5VYS8 1495 aaKnown RBP25.81■■□□□ 1.72
RIOK1-202ENST00000379834 SHROOM4Q9ULL8 1493 aa25.79■■□□□ 1.72
RIOK1-202ENST00000379834 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
RIOK1-202ENST00000379834 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
RIOK1-202ENST00000379834 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
RIOK1-202ENST00000379834 ABCC9O60706 1549 aa24.78■■□□□ 1.56
RIOK1-202ENST00000379834 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.52
RIOK1-202ENST00000379834 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
RIOK1-202ENST00000379834 NACADO15069 1562 aa24.41■■□□□ 1.5
RIOK1-202ENST00000379834 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
RIOK1-202ENST00000379834 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
RIOK1-202ENST00000379834 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
RIOK1-202ENST00000379834 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
RIOK1-202ENST00000379834 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
RIOK1-202ENST00000379834 UNC13AQ9UPW8 1703 aa23.75■■□□□ 1.39
RIOK1-202ENST00000379834 WIZO95785 1651 aa23.65■■□□□ 1.38
RIOK1-202ENST00000379834 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
RIOK1-202ENST00000379834 HRCP23327 699 aa23.6■■□□□ 1.37
RIOK1-202ENST00000379834 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
RIOK1-202ENST00000379834 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
RIOK1-202ENST00000379834 PPARGC1BQ86YN6 1023 aaKnown RBP23.47■■□□□ 1.35
RIOK1-202ENST00000379834 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
RIOK1-202ENST00000379834 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
RIOK1-202ENST00000379834 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
RIOK1-202ENST00000379834 TOP2AP11388 1531 aaKnown RBP23.27■■□□□ 1.32
RIOK1-202ENST00000379834 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
RIOK1-202ENST00000379834 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
RIOK1-202ENST00000379834 PELP1Q8IZL8 1130 aaKnown RBP23.14■■□□□ 1.29
RIOK1-202ENST00000379834 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
RIOK1-202ENST00000379834 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
RIOK1-202ENST00000379834 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
RIOK1-202ENST00000379834 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
RIOK1-202ENST00000379834 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
RIOK1-202ENST00000379834 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
RIOK1-202ENST00000379834 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
RIOK1-202ENST00000379834 BAZ1BQ9UIG0 1483 aaKnown RBP22.87■■□□□ 1.25
RIOK1-202ENST00000379834 SCAF1Q9H7N4 1312 aaKnown RBP22.77■■□□□ 1.24
RIOK1-202ENST00000379834 SOGA1O94964 1423 aa22.64■■□□□ 1.21
RIOK1-202ENST00000379834 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
RIOK1-202ENST00000379834 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
RIOK1-202ENST00000379834 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
RIOK1-202ENST00000379834 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
RIOK1-202ENST00000379834 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
RIOK1-202ENST00000379834 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
RIOK1-202ENST00000379834 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
RIOK1-202ENST00000379834 EEA1Q15075 1411 aa22.41■■□□□ 1.18
RIOK1-202ENST00000379834 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
RIOK1-202ENST00000379834 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
RIOK1-202ENST00000379834 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
RIOK1-202ENST00000379834 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
RIOK1-202ENST00000379834 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
RIOK1-202ENST00000379834 CFTRP13569 1480 aa22.27■■□□□ 1.16
RIOK1-202ENST00000379834 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
RIOK1-202ENST00000379834 MYT1Q01538 1121 aa22.23■■□□□ 1.15
RIOK1-202ENST00000379834 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
RIOK1-202ENST00000379834 CUX1P39880 1505 aa22.19■■□□□ 1.14
RIOK1-202ENST00000379834 CEP164Q9UPV0 1460 aa22.18■■□□□ 1.14
RIOK1-202ENST00000379834 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.13
RIOK1-202ENST00000379834 KIF21BO75037 1637 aa22.14■■□□□ 1.13
RIOK1-202ENST00000379834 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
RIOK1-202ENST00000379834 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
RIOK1-202ENST00000379834 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
RIOK1-202ENST00000379834 RANGAP1P46060 587 aaPredicted RBP22.06■■□□□ 1.12
RIOK1-202ENST00000379834 CLIP1P30622 1438 aa21.99■■□□□ 1.11
RIOK1-202ENST00000379834 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
RIOK1-202ENST00000379834 KIF27Q86VH2 1401 aa21.96■■□□□ 1.11
RIOK1-202ENST00000379834 NESP48681 1621 aa21.93■■□□□ 1.1
RIOK1-202ENST00000379834 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
RIOK1-202ENST00000379834 FANCD2Q9BXW9 1451 aa21.92■■□□□ 1.1
RIOK1-202ENST00000379834 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
RIOK1-202ENST00000379834 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
RIOK1-202ENST00000379834 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
RIOK1-202ENST00000379834 GTF3C3Q9Y5Q9 886 aa21.88■■□□□ 1.09
RIOK1-202ENST00000379834 CUX2O14529 1486 aa21.87■■□□□ 1.09
RIOK1-202ENST00000379834 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
RIOK1-202ENST00000379834 VPS8Q8N3P4 1428 aa21.81■■□□□ 1.08
RIOK1-202ENST00000379834 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
RIOK1-202ENST00000379834 IGF1RP08069 1367 aa21.77■■□□□ 1.08
RIOK1-202ENST00000379834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
RIOK1-202ENST00000379834 RAD54L2Q9Y4B4 1467 aa21.73■■□□□ 1.07
RIOK1-202ENST00000379834 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
RIOK1-202ENST00000379834 TOPBP1Q92547 1522 aa21.72■■□□□ 1.07
RIOK1-202ENST00000379834 APLP2Q06481 763 aa21.72■■□□□ 1.07
RIOK1-202ENST00000379834 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
RIOK1-202ENST00000379834 ARAP1Q96P48 1450 aa21.69■■□□□ 1.06
RIOK1-202ENST00000379834 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
RIOK1-202ENST00000379834 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
RIOK1-202ENST00000379834 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
RIOK1-202ENST00000379834 URB2Q14146 1524 aaKnown RBP21.63■■□□□ 1.05
RIOK1-202ENST00000379834 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
RIOK1-202ENST00000379834 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
RIOK1-202ENST00000379834 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
RIOK1-202ENST00000379834 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
RIOK1-202ENST00000379834 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
RIOK1-202ENST00000379834 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
RIOK1-202ENST00000379834 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
RIOK1-202ENST00000379834 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
RIOK1-202ENST00000379834 WDR97A6NE52 1622 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms