RNA–Protein interactions for RNA: ENST00000379073.9

PMFBP1-203, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 3,671 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-203ENST00000379073 NISCHQ9Y2I1 1504 aa15.08■□□□□ 0
PMFBP1-203ENST00000379073 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
PMFBP1-203ENST00000379073 CCDC180Q9P1Z9 1646 aa12.9□□□□□ -0.34
PMFBP1-203ENST00000379073 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
PMFBP1-203ENST00000379073 ABCC9O60706 1549 aa12.82□□□□□ -0.36
PMFBP1-203ENST00000379073 ZCCHC6Q5VYS8 1495 aaKnown RBP12.58□□□□□ -0.4
PMFBP1-203ENST00000379073 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
PMFBP1-203ENST00000379073 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
PMFBP1-203ENST00000379073 SCRIBQ14160 1630 aa12.27□□□□□ -0.45
PMFBP1-203ENST00000379073 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.45
PMFBP1-203ENST00000379073 NACADO15069 1562 aa12.18□□□□□ -0.46
PMFBP1-203ENST00000379073 RB1CC1Q8TDY2 1594 aa12.17□□□□□ -0.46
PMFBP1-203ENST00000379073 MYO15BQ96JP2 1530 aa12.03□□□□□ -0.48
PMFBP1-203ENST00000379073 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
PMFBP1-203ENST00000379073 RSF1Q96T23 1441 aaPredicted RBP11.79□□□□□ -0.52
PMFBP1-203ENST00000379073 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
PMFBP1-203ENST00000379073 UNC13AQ9UPW8 1703 aa11.73□□□□□ -0.53
PMFBP1-203ENST00000379073 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.54
PMFBP1-203ENST00000379073 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
PMFBP1-203ENST00000379073 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
PMFBP1-203ENST00000379073 CHIC1Q5VXU3 224 aa11.62□□□□□ -0.55
PMFBP1-203ENST00000379073 WIZO95785 1651 aa11.61□□□□□ -0.55
PMFBP1-203ENST00000379073 FAM9AQ8IZU1 332 aaPredicted RBP11.61□□□□□ -0.55
PMFBP1-203ENST00000379073 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
PMFBP1-203ENST00000379073 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
PMFBP1-203ENST00000379073 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
PMFBP1-203ENST00000379073 ATAD2BQ9ULI0 1458 aa11.48□□□□□ -0.57
PMFBP1-203ENST00000379073 EIF4G1Q04637 1599 aaKnown RBP11.47□□□□□ -0.57
PMFBP1-203ENST00000379073 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
PMFBP1-203ENST00000379073 AEBP2Q6ZN18 517 aaPredicted RBP11.42□□□□□ -0.58
PMFBP1-203ENST00000379073 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
PMFBP1-203ENST00000379073 DNAJC5BQ9UF47 199 aa11.4□□□□□ -0.58
PMFBP1-203ENST00000379073 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.59
PMFBP1-203ENST00000379073 LOC105371045A0A1W2PR82 267 aa11.38□□□□□ -0.59
PMFBP1-203ENST00000379073 CC2D2AQ9P2K1 1620 aa11.35□□□□□ -0.59
PMFBP1-203ENST00000379073 NCAPD3P42695 1498 aa11.31□□□□□ -0.6
PMFBP1-203ENST00000379073 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
PMFBP1-203ENST00000379073 ABCC8Q09428 1581 aa11.25□□□□□ -0.61
PMFBP1-203ENST00000379073 PEG3Q9GZU2 1588 aa11.22□□□□□ -0.61
PMFBP1-203ENST00000379073 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
PMFBP1-203ENST00000379073 HMGXB3Q12766 1538 aa11.18□□□□□ -0.62
PMFBP1-203ENST00000379073 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
PMFBP1-203ENST00000379073 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
PMFBP1-203ENST00000379073 NESP48681 1621 aa11.16□□□□□ -0.62
PMFBP1-203ENST00000379073 TTBK1Q5TCY1 1321 aaPredicted RBP11.1□□□□□ -0.63
PMFBP1-203ENST00000379073 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
PMFBP1-203ENST00000379073 SOGA1O94964 1423 aa11.09□□□□□ -0.63
PMFBP1-203ENST00000379073 CFTRP13569 1480 aa11.07□□□□□ -0.64
PMFBP1-203ENST00000379073 PPARGC1BQ86YN6 1023 aaKnown RBP11.07□□□□□ -0.64
PMFBP1-203ENST00000379073 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
PMFBP1-203ENST00000379073 ERCC6Q03468 1493 aa11.04□□□□□ -0.64
PMFBP1-203ENST00000379073 RUSC2Q8N2Y8 1516 aa11.03□□□□□ -0.64
PMFBP1-203ENST00000379073 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
PMFBP1-203ENST00000379073 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
PMFBP1-203ENST00000379073 CEP164Q9UPV0 1460 aa10.98□□□□□ -0.65
PMFBP1-203ENST00000379073 FBLN2P98095 1184 aa10.98□□□□□ -0.65
PMFBP1-203ENST00000379073 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
PMFBP1-203ENST00000379073 ATP1B4Q9UN42 357 aaPredicted RBP10.96□□□□□ -0.66
PMFBP1-203ENST00000379073 CUX2O14529 1486 aa10.95□□□□□ -0.66
PMFBP1-203ENST00000379073 TDRD9Q8NDG6 1382 aaKnown RBP10.94□□□□□ -0.66
PMFBP1-203ENST00000379073 CUX1P39880 1505 aa10.94□□□□□ -0.66
PMFBP1-203ENST00000379073 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
PMFBP1-203ENST00000379073 FGD5Q6ZNL6 1462 aa10.92□□□□□ -0.66
PMFBP1-203ENST00000379073 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
PMFBP1-203ENST00000379073 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
PMFBP1-203ENST00000379073 LAMC3Q9Y6N6 1575 aa10.89□□□□□ -0.67
PMFBP1-203ENST00000379073 APLP2Q06481 763 aa10.89□□□□□ -0.67
PMFBP1-203ENST00000379073 TOPBP1Q92547 1522 aa10.87□□□□□ -0.67
PMFBP1-203ENST00000379073 EEA1Q15075 1411 aa10.86□□□□□ -0.67
PMFBP1-203ENST00000379073 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
PMFBP1-203ENST00000379073 HRCP23327 699 aa10.86□□□□□ -0.67
PMFBP1-203ENST00000379073 URB2Q14146 1524 aaKnown RBP10.84□□□□□ -0.67
PMFBP1-203ENST00000379073 POLA1P09884 1462 aaPredicted RBP10.83□□□□□ -0.68
PMFBP1-203ENST00000379073 CARMIL1Q5VZK9 1371 aa10.83□□□□□ -0.68
PMFBP1-203ENST00000379073 GOLGA3Q08378 1498 aa10.82□□□□□ -0.68
PMFBP1-203ENST00000379073 RAPGEF2Q9Y4G8 1499 aa10.81□□□□□ -0.68
PMFBP1-203ENST00000379073 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.683e-8■■■■■ 38.2
PMFBP1-203ENST00000379073 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
PMFBP1-203ENST00000379073 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
PMFBP1-203ENST00000379073 IGF1RP08069 1367 aa10.8□□□□□ -0.68
PMFBP1-203ENST00000379073 KIF21AQ7Z4S6 1674 aa10.8□□□□□ -0.68
PMFBP1-203ENST00000379073 DNMBPQ6XZF7 1577 aa10.79□□□□□ -0.68
PMFBP1-203ENST00000379073 CEP162Q5TB80 1403 aa10.79□□□□□ -0.68
PMFBP1-203ENST00000379073 ARID3CA6NKF2 412 aa10.78□□□□□ -0.68
PMFBP1-203ENST00000379073 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.69
PMFBP1-203ENST00000379073 CLIP1P30622 1438 aa10.76□□□□□ -0.69
PMFBP1-203ENST00000379073 BIVM-ERCC5R4GMW8 1640 aa10.76□□□□□ -0.69
PMFBP1-203ENST00000379073 GAPVD1Q14C86 1478 aa10.74□□□□□ -0.69
PMFBP1-203ENST00000379073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.73□□□□□ -0.69
PMFBP1-203ENST00000379073 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
PMFBP1-203ENST00000379073 ZNF608Q9ULD9 1512 aaPredicted RBP10.71□□□□□ -0.69
PMFBP1-203ENST00000379073 PRDM2Q13029 1718 aa10.71□□□□□ -0.7
PMFBP1-203ENST00000379073 ABCA10Q8WWZ4 1543 aa10.69□□□□□ -0.7
PMFBP1-203ENST00000379073 TRIM26Q12899 539 aaPredicted RBP10.68□□□□□ -0.7
PMFBP1-203ENST00000379073 PRXQ9BXM0 1461 aa10.66□□□□□ -0.7
PMFBP1-203ENST00000379073 IFT140Q96RY7 1462 aa10.66□□□□□ -0.7
PMFBP1-203ENST00000379073 ITGAEP38570 1179 aa10.65□□□□□ -0.7
PMFBP1-203ENST00000379073 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
PMFBP1-203ENST00000379073 KIF21BO75037 1637 aa10.61□□□□□ -0.71
PMFBP1-203ENST00000379073 SNAPC4Q5SXM2 1469 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms