RNA–Protein interactions for RNA: ENST00000378302.6

RCBTB1-202, Transcript of RCC1 and BTB domain containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCBTB1, Length 4,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1-202ENST00000378302 NISCHQ9Y2I1 1504 aa17.04■□□□□ 0.32
RCBTB1-202ENST00000378302 HRCP23327 699 aa16.3■□□□□ 0.2
RCBTB1-202ENST00000378302 PCGF6Q9BYE7 350 aa16.19■□□□□ 0.18
RCBTB1-202ENST00000378302 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
RCBTB1-202ENST00000378302 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
RCBTB1-202ENST00000378302 PELP1Q8IZL8 1130 aaKnown RBP16.07■□□□□ 0.16
RCBTB1-202ENST00000378302 SHROOM4Q9ULL8 1493 aa16.04■□□□□ 0.16
RCBTB1-202ENST00000378302 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
RCBTB1-202ENST00000378302 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
RCBTB1-202ENST00000378302 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
RCBTB1-202ENST00000378302 MYT1Q01538 1121 aa15.5■□□□□ 0.07
RCBTB1-202ENST00000378302 MYO15BQ96JP2 1530 aa15.46■□□□□ 0.07
RCBTB1-202ENST00000378302 LOC105371045A0A1W2PR82 267 aa15.42■□□□□ 0.06
RCBTB1-202ENST00000378302 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
RCBTB1-202ENST00000378302 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
RCBTB1-202ENST00000378302 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
RCBTB1-202ENST00000378302 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
RCBTB1-202ENST00000378302 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
RCBTB1-202ENST00000378302 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
RCBTB1-202ENST00000378302 NEUROD1Q13562 356 aa15.15■□□□□ 0.02
RCBTB1-202ENST00000378302 DCAF1Q9Y4B6 1507 aa15.09■□□□□ 0.01
RCBTB1-202ENST00000378302 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
RCBTB1-202ENST00000378302 YTHDC1Q96MU7 727 aaKnown RBP15.05■□□□□ 0
RCBTB1-202ENST00000378302 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
RCBTB1-202ENST00000378302 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
RCBTB1-202ENST00000378302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
RCBTB1-202ENST00000378302 TTBK1Q5TCY1 1321 aaPredicted RBP14.89□□□□□ -0.03
RCBTB1-202ENST00000378302 CCDC180Q9P1Z9 1646 aa14.87□□□□□ -0.03
RCBTB1-202ENST00000378302 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
RCBTB1-202ENST00000378302 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
RCBTB1-202ENST00000378302 ZNF316A6NFI3 1004 aaPredicted RBP14.5□□□□□ -0.09
RCBTB1-202ENST00000378302 MIER1Q8N108 512 aa14.47□□□□□ -0.09
RCBTB1-202ENST00000378302 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
RCBTB1-202ENST00000378302 ANP32EQ9BTT0 268 aa14.42□□□□□ -0.1
RCBTB1-202ENST00000378302 BCANQ96GW7 911 aa14.37□□□□□ -0.11
RCBTB1-202ENST00000378302 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
RCBTB1-202ENST00000378302 HNRNPUL2Q1KMD3 747 aaKnown RBP14.3□□□□□ -0.12
RCBTB1-202ENST00000378302 SUPT16HQ9Y5B9 1047 aaKnown RBP14.28□□□□□ -0.12
RCBTB1-202ENST00000378302 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
RCBTB1-202ENST00000378302 ERICH6Q7L0X2 663 aa14.23□□□□□ -0.13
RCBTB1-202ENST00000378302 UBTFP17480 764 aaKnown RBP14.14□□□□□ -0.15
RCBTB1-202ENST00000378302 NEFLP07196 543 aa14.12□□□□□ -0.15
RCBTB1-202ENST00000378302 RANGAP1P46060 587 aaPredicted RBP14.09□□□□□ -0.15
RCBTB1-202ENST00000378302 FKBP8Q14318 412 aa14.08□□□□□ -0.15
RCBTB1-202ENST00000378302 CLSPNQ9HAW4 1339 aa14.07□□□□□ -0.16
RCBTB1-202ENST00000378302 APLP2Q06481 763 aa14.05□□□□□ -0.16
RCBTB1-202ENST00000378302 ITGAEP38570 1179 aa14.03□□□□□ -0.16
RCBTB1-202ENST00000378302 PRKCSHP14314 528 aaPredicted RBP14.02□□□□□ -0.17
RCBTB1-202ENST00000378302 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.17
RCBTB1-202ENST00000378302 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
RCBTB1-202ENST00000378302 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
RCBTB1-202ENST00000378302 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
RCBTB1-202ENST00000378302 CEP162Q5TB80 1403 aa13.86□□□□□ -0.19
RCBTB1-202ENST00000378302 ABCC9O60706 1549 aa13.85□□□□□ -0.19
RCBTB1-202ENST00000378302 TRIM52Q96A61 297 aa13.85□□□□□ -0.19
RCBTB1-202ENST00000378302 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
RCBTB1-202ENST00000378302 CDK11AQ9UQ88 783 aaPredicted RBP13.8□□□□□ -0.2
RCBTB1-202ENST00000378302 IRX6P78412 446 aaPredicted RBP13.79□□□□□ -0.2
RCBTB1-202ENST00000378302 NBR1Q14596 966 aa13.79□□□□□ -0.2
RCBTB1-202ENST00000378302 DDX10Q13206 875 aaKnown RBP13.77□□□□□ -0.21
RCBTB1-202ENST00000378302 DEKP35659 375 aaKnown RBP13.76□□□□□ -0.21
RCBTB1-202ENST00000378302 MSH5O43196 834 aa13.72□□□□□ -0.21
RCBTB1-202ENST00000378302 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.22
RCBTB1-202ENST00000378302 SCRIBQ14160 1630 aa13.69□□□□□ -0.22
RCBTB1-202ENST00000378302 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
RCBTB1-202ENST00000378302 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
RCBTB1-202ENST00000378302 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
RCBTB1-202ENST00000378302 RTL5Q5HYW3 569 aaPredicted RBP13.67□□□□□ -0.22
RCBTB1-202ENST00000378302 CCDC136Q96JN2 1154 aa13.66□□□□□ -0.22
RCBTB1-202ENST00000378302 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
RCBTB1-202ENST00000378302 ANP32CO43423 234 aa13.64□□□□□ -0.23
RCBTB1-202ENST00000378302 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
RCBTB1-202ENST00000378302 SOGA1O94964 1423 aa13.61□□□□□ -0.23
RCBTB1-202ENST00000378302 HNRNPUQ00839 825 aaKnown RBP eCLIP13.58□□□□□ -0.24
RCBTB1-202ENST00000378302 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
RCBTB1-202ENST00000378302 CCDC88BA6NC98 1476 aa13.56□□□□□ -0.24
RCBTB1-202ENST00000378302 SALL2Q9Y467 1007 aaPredicted RBP13.55□□□□□ -0.24
RCBTB1-202ENST00000378302 EIF5BO60841 1220 aaKnown RBP13.54□□□□□ -0.24
RCBTB1-202ENST00000378302 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
RCBTB1-202ENST00000378302 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
RCBTB1-202ENST00000378302 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.24
RCBTB1-202ENST00000378302 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
RCBTB1-202ENST00000378302 CLIP1P30622 1438 aa13.51□□□□□ -0.25
RCBTB1-202ENST00000378302 NOP58Q9Y2X3 529 aaKnown RBP13.5□□□□□ -0.25
RCBTB1-202ENST00000378302 CNGB1Q14028 1251 aaPredicted RBP13.48□□□□□ -0.25
RCBTB1-202ENST00000378302 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
RCBTB1-202ENST00000378302 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
RCBTB1-202ENST00000378302 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.25
RCBTB1-202ENST00000378302 ANP32AP39687 249 aaKnown RBP13.46□□□□□ -0.26
RCBTB1-202ENST00000378302 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
RCBTB1-202ENST00000378302 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
RCBTB1-202ENST00000378302 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
RCBTB1-202ENST00000378302 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
RCBTB1-202ENST00000378302 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
RCBTB1-202ENST00000378302 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
RCBTB1-202ENST00000378302 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
RCBTB1-202ENST00000378302 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
RCBTB1-202ENST00000378302 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
RCBTB1-202ENST00000378302 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
RCBTB1-202ENST00000378302 FAM9BQ8IZU0 186 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms