RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 NISCHQ9Y2I1 1504 aa38.67■■■■□ 3.78
NKX2-2-201ENST00000377142 CCDC180Q9P1Z9 1646 aa33.57■■■□□ 2.96
NKX2-2-201ENST00000377142 ZCCHC6Q5VYS8 1495 aaKnown RBP32.6■■■□□ 2.81
NKX2-2-201ENST00000377142 DCAF1Q9Y4B6 1507 aa31.99■■■□□ 2.71
NKX2-2-201ENST00000377142 SHROOM4Q9ULL8 1493 aa31.83■■■□□ 2.69
NKX2-2-201ENST00000377142 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
NKX2-2-201ENST00000377142 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
NKX2-2-201ENST00000377142 ABCC9O60706 1549 aa31.26■■■□□ 2.59
NKX2-2-201ENST00000377142 NACADO15069 1562 aa31.12■■■□□ 2.57
NKX2-2-201ENST00000377142 SCRIBQ14160 1630 aa30.91■■■□□ 2.54
NKX2-2-201ENST00000377142 SUPT5HO00267 1087 aaKnown RBP30.83■■■□□ 2.53
NKX2-2-201ENST00000377142 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
NKX2-2-201ENST00000377142 UNC13AQ9UPW8 1703 aa30.2■■■□□ 2.42
NKX2-2-201ENST00000377142 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
NKX2-2-201ENST00000377142 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
NKX2-2-201ENST00000377142 MROH2BQ7Z745 1585 aa29.89■■■□□ 2.38
NKX2-2-201ENST00000377142 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
NKX2-2-201ENST00000377142 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
NKX2-2-201ENST00000377142 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
NKX2-2-201ENST00000377142 WIZO95785 1651 aa29.7■■■□□ 2.34
NKX2-2-201ENST00000377142 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
NKX2-2-201ENST00000377142 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
NKX2-2-201ENST00000377142 TOP2AP11388 1531 aaKnown RBP29.41■■■□□ 2.3
NKX2-2-201ENST00000377142 PEG3Q9GZU2 1588 aa29.28■■■□□ 2.28
NKX2-2-201ENST00000377142 SMARCA2P51531 1590 aa29.14■■■□□ 2.26
NKX2-2-201ENST00000377142 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
NKX2-2-201ENST00000377142 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
NKX2-2-201ENST00000377142 ATAD2BQ9ULI0 1458 aa29.02■■■□□ 2.24
NKX2-2-201ENST00000377142 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
NKX2-2-201ENST00000377142 BAZ1BQ9UIG0 1483 aaKnown RBP28.9■■■□□ 2.22
NKX2-2-201ENST00000377142 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
NKX2-2-201ENST00000377142 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
NKX2-2-201ENST00000377142 ABCC8Q09428 1581 aa28.64■■■□□ 2.17
NKX2-2-201ENST00000377142 LOC105371045A0A1W2PR82 267 aa28.6■■■□□ 2.17
NKX2-2-201ENST00000377142 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
NKX2-2-201ENST00000377142 WRNQ14191 1432 aaPredicted RBP eCLIP28.39■■■□□ 2.13
NKX2-2-201ENST00000377142 CC2D2AQ9P2K1 1620 aa28.33■■■□□ 2.13
NKX2-2-201ENST00000377142 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
NKX2-2-201ENST00000377142 EEA1Q15075 1411 aa28.24■■■□□ 2.11
NKX2-2-201ENST00000377142 CFTRP13569 1480 aa28.19■■■□□ 2.1
NKX2-2-201ENST00000377142 PRDM2Q13029 1718 aa28.18■■■□□ 2.1
NKX2-2-201ENST00000377142 SOGA1O94964 1423 aa28.15■■■□□ 2.1
NKX2-2-201ENST00000377142 TOP2BQ02880 1626 aa28.14■■■□□ 2.09
NKX2-2-201ENST00000377142 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
NKX2-2-201ENST00000377142 RUSC2Q8N2Y8 1516 aa28.02■■■□□ 2.08
NKX2-2-201ENST00000377142 EHMT2Q96KQ7 1210 aa28■■■□□ 2.07
NKX2-2-201ENST00000377142 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
NKX2-2-201ENST00000377142 CADPSQ9ULU8 1353 aa27.97■■■□□ 2.07
NKX2-2-201ENST00000377142 CUX1P39880 1505 aa27.93■■■□□ 2.06
NKX2-2-201ENST00000377142 KIF21BO75037 1637 aa27.88■■■□□ 2.05
NKX2-2-201ENST00000377142 GOLGA3Q08378 1498 aa27.87■■■□□ 2.05
NKX2-2-201ENST00000377142 TNIKQ9UKE5 1360 aa27.84■■■□□ 2.05
NKX2-2-201ENST00000377142 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.05
NKX2-2-201ENST00000377142 PCGF6Q9BYE7 350 aa27.8■■■□□ 2.04
NKX2-2-201ENST00000377142 CEP162Q5TB80 1403 aa27.74■■■□□ 2.03
NKX2-2-201ENST00000377142 TRIM26Q12899 539 aaPredicted RBP27.71■■■□□ 2.03
NKX2-2-201ENST00000377142 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
NKX2-2-201ENST00000377142 LAMC3Q9Y6N6 1575 aa27.68■■■□□ 2.02
NKX2-2-201ENST00000377142 UBTFP17480 764 aaKnown RBP27.66■■■□□ 2.02
NKX2-2-201ENST00000377142 KIF27Q86VH2 1401 aa27.63■■■□□ 2.01
NKX2-2-201ENST00000377142 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
NKX2-2-201ENST00000377142 NESP48681 1621 aa27.59■■■□□ 2.01
NKX2-2-201ENST00000377142 RAPGEF2Q9Y4G8 1499 aa27.58■■■□□ 2.01
NKX2-2-201ENST00000377142 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
NKX2-2-201ENST00000377142 PRXQ9BXM0 1461 aa27.56■■■□□ 2
NKX2-2-201ENST00000377142 FGD5Q6ZNL6 1462 aa27.55■■■□□ 2
NKX2-2-201ENST00000377142 TOPBP1Q92547 1522 aa27.45■■□□□ 1.99
NKX2-2-201ENST00000377142 CUX2O14529 1486 aa27.45■■□□□ 1.98
NKX2-2-201ENST00000377142 CLIP1P30622 1438 aa27.42■■□□□ 1.98
NKX2-2-201ENST00000377142 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
NKX2-2-201ENST00000377142 HRCP23327 699 aa27.4■■□□□ 1.98
NKX2-2-201ENST00000377142 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
NKX2-2-201ENST00000377142 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
NKX2-2-201ENST00000377142 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
NKX2-2-201ENST00000377142 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.96
NKX2-2-201ENST00000377142 URB2Q14146 1524 aaKnown RBP27.32■■□□□ 1.96
NKX2-2-201ENST00000377142 IGF1RP08069 1367 aa27.29■■□□□ 1.96
NKX2-2-201ENST00000377142 VPS8Q8N3P4 1428 aa27.26■■□□□ 1.95
NKX2-2-201ENST00000377142 WDR97A6NE52 1622 aa27.25■■□□□ 1.95
NKX2-2-201ENST00000377142 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
NKX2-2-201ENST00000377142 PPARGC1BQ86YN6 1023 aaKnown RBP27.23■■□□□ 1.95
NKX2-2-201ENST00000377142 CARMIL1Q5VZK9 1371 aa27.18■■□□□ 1.94
NKX2-2-201ENST00000377142 CUL7Q14999 1698 aa27.15■■□□□ 1.94
NKX2-2-201ENST00000377142 ARAP1Q96P48 1450 aa27.1■■□□□ 1.93
NKX2-2-201ENST00000377142 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
NKX2-2-201ENST00000377142 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
NKX2-2-201ENST00000377142 RANGAP1P46060 587 aaPredicted RBP27.05■■□□□ 1.92
NKX2-2-201ENST00000377142 TARBP1Q13395 1621 aaKnown RBP27.02■■□□□ 1.92
NKX2-2-201ENST00000377142 ARHGAP35Q9NRY4 1499 aa27.01■■□□□ 1.91
NKX2-2-201ENST00000377142 GAPVD1Q14C86 1478 aa26.97■■□□□ 1.91
NKX2-2-201ENST00000377142 APLP2Q06481 763 aa26.96■■□□□ 1.91
NKX2-2-201ENST00000377142 TTBK1Q5TCY1 1321 aaPredicted RBP26.94■■□□□ 1.9
NKX2-2-201ENST00000377142 CTTNBP2Q8WZ74 1663 aa26.93■■□□□ 1.9
NKX2-2-201ENST00000377142 TDRD9Q8NDG6 1382 aaKnown RBP26.92■■□□□ 1.9
NKX2-2-201ENST00000377142 WDR62O43379 1518 aa26.91■■□□□ 1.9
NKX2-2-201ENST00000377142 PBRM1Q86U86 1689 aa26.86■■□□□ 1.89
NKX2-2-201ENST00000377142 ZEB1P37275 1124 aaPredicted RBP26.86■■□□□ 1.89
NKX2-2-201ENST00000377142 EFCAB5A4FU69 1503 aa26.82■■□□□ 1.88
NKX2-2-201ENST00000377142 IFT140Q96RY7 1462 aa26.79■■□□□ 1.88
NKX2-2-201ENST00000377142 ERCC6Q03468 1493 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms