RNA–Protein interactions for RNA: ENST00000376362.1

GKAP1-201, Transcript of G kinase anchoring protein 1, humanhuman

TSL 1 (best)

Gene GKAP1, Length 1,237 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKAP1-201ENST00000376362 AEBP2Q6ZN18 517 aaPredicted RBP26.74■■□□□ 1.87
GKAP1-201ENST00000376362 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
GKAP1-201ENST00000376362 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
GKAP1-201ENST00000376362 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
GKAP1-201ENST00000376362 FOXD1Q16676 465 aa21.48■■□□□ 1.03
GKAP1-201ENST00000376362 POTEDQ86YR6 584 aa20.94■□□□□ 0.94
GKAP1-201ENST00000376362 MSH5O43196 834 aa20.41■□□□□ 0.86
GKAP1-201ENST00000376362 PIAS4Q8N2W9 510 aaPredicted RBP20■□□□□ 0.79
GKAP1-201ENST00000376362 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
GKAP1-201ENST00000376362 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
GKAP1-201ENST00000376362 ADRA2BP18089 450 aa19.53■□□□□ 0.72
GKAP1-201ENST00000376362 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
GKAP1-201ENST00000376362 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
GKAP1-201ENST00000376362 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
GKAP1-201ENST00000376362 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
GKAP1-201ENST00000376362 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
GKAP1-201ENST00000376362 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
GKAP1-201ENST00000376362 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
GKAP1-201ENST00000376362 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
GKAP1-201ENST00000376362 C1QBPQ07021 282 aaKnown RBP17.05■□□□□ 0.32
GKAP1-201ENST00000376362 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
GKAP1-201ENST00000376362 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
GKAP1-201ENST00000376362 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
GKAP1-201ENST00000376362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
GKAP1-201ENST00000376362 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
GKAP1-201ENST00000376362 POTEHQ6S545 545 aa16.32■□□□□ 0.2
GKAP1-201ENST00000376362 CAPN15O75808 1086 aa16.06■□□□□ 0.16
GKAP1-201ENST00000376362 NPM3O75607 178 aaKnown RBP16■□□□□ 0.15
GKAP1-201ENST00000376362 DSG3P32926 999 aa15.99■□□□□ 0.15
GKAP1-201ENST00000376362 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
GKAP1-201ENST00000376362 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
GKAP1-201ENST00000376362 KCNA4P22459 653 aa15.79■□□□□ 0.12
GKAP1-201ENST00000376362 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
GKAP1-201ENST00000376362 APLP2Q06481 763 aa15.61■□□□□ 0.09
GKAP1-201ENST00000376362 ABCB7O75027 752 aa15.59■□□□□ 0.09
GKAP1-201ENST00000376362 ZNF219Q9P2Y4 722 aaPredicted RBP15.55■□□□□ 0.08
GKAP1-201ENST00000376362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
GKAP1-201ENST00000376362 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
GKAP1-201ENST00000376362 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
GKAP1-201ENST00000376362 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
GKAP1-201ENST00000376362 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
GKAP1-201ENST00000376362 CHRDL2Q6WN34 429 aa15.24■□□□□ 0.03
GKAP1-201ENST00000376362 POLA2Q14181 598 aa15.03■□□□□ -0
GKAP1-201ENST00000376362 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
GKAP1-201ENST00000376362 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
GKAP1-201ENST00000376362 MYCNP04198 464 aaPredicted RBP14.86□□□□□ -0.03
GKAP1-201ENST00000376362 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
GKAP1-201ENST00000376362 HAX1O00165 279 aa14.72□□□□□ -0.05
GKAP1-201ENST00000376362 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
GKAP1-201ENST00000376362 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
GKAP1-201ENST00000376362 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
GKAP1-201ENST00000376362 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
GKAP1-201ENST00000376362 ZBTB22O15209 634 aa14.59□□□□□ -0.07
GKAP1-201ENST00000376362 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
GKAP1-201ENST00000376362 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
GKAP1-201ENST00000376362 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
GKAP1-201ENST00000376362 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
GKAP1-201ENST00000376362 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
GKAP1-201ENST00000376362 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
GKAP1-201ENST00000376362 EVX2Q03828 476 aa14.34□□□□□ -0.11
GKAP1-201ENST00000376362 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
GKAP1-201ENST00000376362 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
GKAP1-201ENST00000376362 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
GKAP1-201ENST00000376362 SPDYE2Q495Y8 402 aa14.17□□□□□ -0.14
GKAP1-201ENST00000376362 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
GKAP1-201ENST00000376362 FBLN2P98095 1184 aa14.12□□□□□ -0.15
GKAP1-201ENST00000376362 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
GKAP1-201ENST00000376362 ATXN8OSP0DMR3 200 aa14.09□□□□□ -0.15
GKAP1-201ENST00000376362 LHX8Q68G74 356 aa14.08□□□□□ -0.16
GKAP1-201ENST00000376362 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
GKAP1-201ENST00000376362 GABBR2O75899 941 aa14.05□□□□□ -0.16
GKAP1-201ENST00000376362 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
GKAP1-201ENST00000376362 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
GKAP1-201ENST00000376362 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
GKAP1-201ENST00000376362 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
GKAP1-201ENST00000376362 PLSCR2Q9NRY7 297 aa13.8□□□□□ -0.2
GKAP1-201ENST00000376362 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
GKAP1-201ENST00000376362 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
GKAP1-201ENST00000376362 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
GKAP1-201ENST00000376362 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
GKAP1-201ENST00000376362 CLCN6P51797 869 aa13.64□□□□□ -0.23
GKAP1-201ENST00000376362 DCBLD2Q96PD2 775 aa13.64□□□□□ -0.23
GKAP1-201ENST00000376362 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
GKAP1-201ENST00000376362 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
GKAP1-201ENST00000376362 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
GKAP1-201ENST00000376362 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
GKAP1-201ENST00000376362 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
GKAP1-201ENST00000376362 POTEMA6NI47 508 aa13.3□□□□□ -0.28
GKAP1-201ENST00000376362 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
GKAP1-201ENST00000376362 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
GKAP1-201ENST00000376362 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
GKAP1-201ENST00000376362 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
GKAP1-201ENST00000376362 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
GKAP1-201ENST00000376362 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
GKAP1-201ENST00000376362 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
GKAP1-201ENST00000376362 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
GKAP1-201ENST00000376362 FKBP8Q14318 412 aa13.07□□□□□ -0.32
GKAP1-201ENST00000376362 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
GKAP1-201ENST00000376362 METRNQ9UJH8 293 aa13.05□□□□□ -0.32
GKAP1-201ENST00000376362 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms