RNA–Protein interactions for RNA: ENST00000375734.6

RND3-202, Transcript of Rho family GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RND3, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-202ENST00000375734 NISCHQ9Y2I1 1504 aa16.64■□□□□ 0.25
RND3-202ENST00000375734 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.04
RND3-202ENST00000375734 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
RND3-202ENST00000375734 ABCC9O60706 1549 aa14.27□□□□□ -0.12
RND3-202ENST00000375734 CCDC180Q9P1Z9 1646 aa14.11□□□□□ -0.15
RND3-202ENST00000375734 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
RND3-202ENST00000375734 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.19
RND3-202ENST00000375734 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
RND3-202ENST00000375734 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
RND3-202ENST00000375734 DCAF1Q9Y4B6 1507 aa13.34□□□□□ -0.27
RND3-202ENST00000375734 NACADO15069 1562 aa13.33□□□□□ -0.27
RND3-202ENST00000375734 RB1CC1Q8TDY2 1594 aa13.33□□□□□ -0.27
RND3-202ENST00000375734 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
RND3-202ENST00000375734 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
RND3-202ENST00000375734 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
RND3-202ENST00000375734 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
RND3-202ENST00000375734 RSF1Q96T23 1441 aaPredicted RBP13.06□□□□□ -0.32
RND3-202ENST00000375734 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
RND3-202ENST00000375734 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
RND3-202ENST00000375734 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
RND3-202ENST00000375734 WIZO95785 1651 aa12.93□□□□□ -0.34
RND3-202ENST00000375734 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
RND3-202ENST00000375734 CHIC1Q5VXU3 224 aa12.85□□□□□ -0.35
RND3-202ENST00000375734 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.36
RND3-202ENST00000375734 SMARCA4P51532 1647 aa12.76□□□□□ -0.37
RND3-202ENST00000375734 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
RND3-202ENST00000375734 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
RND3-202ENST00000375734 EIF4G1Q04637 1599 aaKnown RBP12.7□□□□□ -0.38
RND3-202ENST00000375734 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
RND3-202ENST00000375734 CCDC88BA6NC98 1476 aa12.67□□□□□ -0.38
RND3-202ENST00000375734 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
RND3-202ENST00000375734 RANGAP1P46060 587 aaPredicted RBP12.6□□□□□ -0.39
RND3-202ENST00000375734 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
RND3-202ENST00000375734 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
RND3-202ENST00000375734 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
RND3-202ENST00000375734 SMARCA2P51531 1590 aa12.51□□□□□ -0.41
RND3-202ENST00000375734 NESP48681 1621 aa12.49□□□□□ -0.41
RND3-202ENST00000375734 TTBK1Q5TCY1 1321 aaPredicted RBP12.44□□□□□ -0.42
RND3-202ENST00000375734 NCAPD3P42695 1498 aa12.44□□□□□ -0.42
RND3-202ENST00000375734 PPARGC1BQ86YN6 1023 aaKnown RBP12.44□□□□□ -0.42
RND3-202ENST00000375734 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
RND3-202ENST00000375734 SOGA1O94964 1423 aa12.35□□□□□ -0.43
RND3-202ENST00000375734 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
RND3-202ENST00000375734 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
RND3-202ENST00000375734 WRNQ14191 1432 aaPredicted RBP eCLIP12.31□□□□□ -0.44
RND3-202ENST00000375734 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
RND3-202ENST00000375734 HMGXB3Q12766 1538 aa12.27□□□□□ -0.45
RND3-202ENST00000375734 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
RND3-202ENST00000375734 CFTRP13569 1480 aa12.21□□□□□ -0.45
RND3-202ENST00000375734 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.46
RND3-202ENST00000375734 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
RND3-202ENST00000375734 RAD54L2Q9Y4B4 1467 aa12.18□□□□□ -0.46
RND3-202ENST00000375734 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
RND3-202ENST00000375734 FBLN2P98095 1184 aa12.16□□□□□ -0.46
RND3-202ENST00000375734 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
RND3-202ENST00000375734 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
RND3-202ENST00000375734 CUX1P39880 1505 aa12.14□□□□□ -0.47
RND3-202ENST00000375734 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
RND3-202ENST00000375734 CUX2O14529 1486 aa12.08□□□□□ -0.48
RND3-202ENST00000375734 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
RND3-202ENST00000375734 ARID3CA6NKF2 412 aa12.07□□□□□ -0.48
RND3-202ENST00000375734 FGD5Q6ZNL6 1462 aa12.07□□□□□ -0.48
RND3-202ENST00000375734 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
RND3-202ENST00000375734 PDS5BQ9NTI5 1447 aa12.06□□□□□ -0.48
RND3-202ENST00000375734 URB2Q14146 1524 aaKnown RBP12.05□□□□□ -0.48
RND3-202ENST00000375734 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.48
RND3-202ENST00000375734 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
RND3-202ENST00000375734 KIF21AQ7Z4S6 1674 aa12.01□□□□□ -0.49
RND3-202ENST00000375734 TOPBP1Q92547 1522 aa12□□□□□ -0.49
RND3-202ENST00000375734 POLA1P09884 1462 aaPredicted RBP11.99□□□□□ -0.49
RND3-202ENST00000375734 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
RND3-202ENST00000375734 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.49
RND3-202ENST00000375734 KIF27Q86VH2 1401 aa11.95□□□□□ -0.5
RND3-202ENST00000375734 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
RND3-202ENST00000375734 IGF1RP08069 1367 aa11.94□□□□□ -0.5
RND3-202ENST00000375734 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
RND3-202ENST00000375734 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
RND3-202ENST00000375734 MRC2Q9UBG0 1479 aa11.88□□□□□ -0.51
RND3-202ENST00000375734 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
RND3-202ENST00000375734 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
RND3-202ENST00000375734 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
RND3-202ENST00000375734 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
RND3-202ENST00000375734 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
RND3-202ENST00000375734 ITGAEP38570 1179 aa11.82□□□□□ -0.52
RND3-202ENST00000375734 CLIP1P30622 1438 aa11.81□□□□□ -0.52
RND3-202ENST00000375734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
RND3-202ENST00000375734 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
RND3-202ENST00000375734 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
RND3-202ENST00000375734 APLP2Q06481 763 aa11.78□□□□□ -0.52
RND3-202ENST00000375734 EEA1Q15075 1411 aa11.77□□□□□ -0.53
RND3-202ENST00000375734 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
RND3-202ENST00000375734 PRXQ9BXM0 1461 aa11.76□□□□□ -0.53
RND3-202ENST00000375734 ABCA10Q8WWZ4 1543 aa11.75□□□□□ -0.53
RND3-202ENST00000375734 FHOD3Q2V2M9 1422 aa11.75□□□□□ -0.53
RND3-202ENST00000375734 SNAPC4Q5SXM2 1469 aa11.74□□□□□ -0.53
RND3-202ENST00000375734 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
RND3-202ENST00000375734 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
RND3-202ENST00000375734 WDR62O43379 1518 aa11.69□□□□□ -0.54
RND3-202ENST00000375734 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
RND3-202ENST00000375734 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms