RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 FTSJ3Q8IY81 847 aaKnown RBP10.84□□□□□ -0.67
HSPG2-203ENST00000374695 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
HSPG2-203ENST00000374695 MSNP26038 577 aaKnown RBP10.83□□□□□ -0.67
HSPG2-203ENST00000374695 PTMSP20962 102 aa10.83□□□□□ -0.68
HSPG2-203ENST00000374695 CSRNP3Q8WYN3 585 aa10.83□□□□□ -0.68
HSPG2-203ENST00000374695 CDCA8Q53HL2 280 aa10.83□□□□□ -0.68
HSPG2-203ENST00000374695 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
HSPG2-203ENST00000374695 SCRIBQ14160 1630 aa10.81□□□□□ -0.68
HSPG2-203ENST00000374695 MS4A1P11836 297 aa10.81□□□□□ -0.68
HSPG2-203ENST00000374695 SALL2Q9Y467 1007 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-203ENST00000374695 USP35Q9P2H5 1018 aa10.81□□□□□ -0.68
HSPG2-203ENST00000374695 CFAP53Q96M91 514 aa10.81□□□□□ -0.68
HSPG2-203ENST00000374695 NOP58Q9Y2X3 529 aaKnown RBP10.8□□□□□ -0.68
HSPG2-203ENST00000374695 KIAA2012Q0VF49 1180 aa10.78□□□□□ -0.68
HSPG2-203ENST00000374695 KAT6BQ8WYB5 2073 aa10.78□□□□□ -0.68
HSPG2-203ENST00000374695 HSP90AB1P08238 724 aaKnown RBP10.78□□□□□ -0.68
HSPG2-203ENST00000374695 EIF4G2P78344 907 aaKnown RBP eCLIP10.78□□□□□ -0.682e-6■■■■□ 24.8
HSPG2-203ENST00000374695 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.68
HSPG2-203ENST00000374695 HSCBQ8IWL3 235 aa10.76□□□□□ -0.69
HSPG2-203ENST00000374695 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
HSPG2-203ENST00000374695 GOLGA6L4A6NEF3 574 aa10.75□□□□□ -0.69
HSPG2-203ENST00000374695 MCCP23508 829 aa10.75□□□□□ -0.69
HSPG2-203ENST00000374695 FGD1P98174 961 aa10.75□□□□□ -0.69
HSPG2-203ENST00000374695 NPM1P06748 294 aaKnown RBP eCLIP10.74□□□□□ -0.69
HSPG2-203ENST00000374695 TSPY4P0CV99 314 aa10.74□□□□□ -0.69
HSPG2-203ENST00000374695 TSPY10P0CW01 314 aa10.74□□□□□ -0.69
HSPG2-203ENST00000374695 RSF1Q96T23 1441 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-203ENST00000374695 MTUS2Q5JR59 1369 aa10.74□□□□□ -0.69
HSPG2-203ENST00000374695 PNNQ9H307 717 aaKnown RBP10.73□□□□□ -0.69
HSPG2-203ENST00000374695 ABCC9O60706 1549 aa10.72□□□□□ -0.69
HSPG2-203ENST00000374695 NOC3LQ8WTT2 800 aaKnown RBP10.72□□□□□ -0.69
HSPG2-203ENST00000374695 ARID3CA6NKF2 412 aa10.72□□□□□ -0.69
HSPG2-203ENST00000374695 PPP4R2Q9NY27 417 aa10.71□□□□□ -0.69
HSPG2-203ENST00000374695 PLCB2Q00722 1185 aa10.71□□□□□ -0.7
HSPG2-203ENST00000374695 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
HSPG2-203ENST00000374695 DRC7Q8IY82 874 aa10.7□□□□□ -0.7
HSPG2-203ENST00000374695 IRX6P78412 446 aaPredicted RBP10.7□□□□□ -0.7
HSPG2-203ENST00000374695 GOLGA6L1Q8N7Z2 621 aa10.7□□□□□ -0.7
HSPG2-203ENST00000374695 TNNT3P45378 269 aaPredicted RBP10.69□□□□□ -0.7
HSPG2-203ENST00000374695 KCNJ4P48050 445 aa10.69□□□□□ -0.7
HSPG2-203ENST00000374695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.74e-7■■□□□ 12
HSPG2-203ENST00000374695 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
HSPG2-203ENST00000374695 A0A0G2JS52 829 aa10.69□□□□□ -0.7
HSPG2-203ENST00000374695 GBP4Q96PP9 640 aa10.68□□□□□ -0.7
HSPG2-203ENST00000374695 SYAP1Q96A49 352 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-203ENST00000374695 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
HSPG2-203ENST00000374695 EEA1Q15075 1411 aa10.67□□□□□ -0.7
HSPG2-203ENST00000374695 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
HSPG2-203ENST00000374695 MIER1Q8N108 512 aa10.67□□□□□ -0.7
HSPG2-203ENST00000374695 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
HSPG2-203ENST00000374695 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
HSPG2-203ENST00000374695 CCDC34Q96HJ3 373 aa10.66□□□□□ -0.7
HSPG2-203ENST00000374695 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-203ENST00000374695 HTATSF1O43719 755 aaKnown RBP10.66□□□□□ -0.7
HSPG2-203ENST00000374695 DEKP35659 375 aaKnown RBP10.66□□□□□ -0.7
HSPG2-203ENST00000374695 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
HSPG2-203ENST00000374695 PPP1R15AO75807 674 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-203ENST00000374695 TPM4P67936 248 aa10.65□□□□□ -0.7
HSPG2-203ENST00000374695 PABPN1Q86U42 306 aaKnown RBP eCLIP10.65□□□□□ -0.72e-6■■□□□ 13.6
HSPG2-203ENST00000374695 CLIP1P30622 1438 aa10.65□□□□□ -0.71
HSPG2-203ENST00000374695 HAP1P54257 671 aaPredicted RBP10.65□□□□□ -0.71
HSPG2-203ENST00000374695 SETQ01105 290 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-203ENST00000374695 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
HSPG2-203ENST00000374695 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
HSPG2-203ENST00000374695 GOLGA3Q08378 1498 aa10.63□□□□□ -0.71
HSPG2-203ENST00000374695 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
HSPG2-203ENST00000374695 GNL2Q13823 731 aaKnown RBP10.63□□□□□ -0.71
HSPG2-203ENST00000374695 CLSTN1O94985 981 aa10.61□□□□□ -0.71
HSPG2-203ENST00000374695 NPHP1O15259 732 aa10.61□□□□□ -0.71
HSPG2-203ENST00000374695 PHF14O94880 888 aa10.61□□□□□ -0.71
HSPG2-203ENST00000374695 NAP1L2Q9ULW6 460 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-203ENST00000374695 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
HSPG2-203ENST00000374695 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
HSPG2-203ENST00000374695 SUPT16HQ9Y5B9 1047 aaKnown RBP10.6□□□□□ -0.71
HSPG2-203ENST00000374695 KIAA1211Q6ZU35 1233 aa10.59□□□□□ -0.71
HSPG2-203ENST00000374695 RGS3P49796 1198 aa10.59□□□□□ -0.71
HSPG2-203ENST00000374695 MTERF4Q7Z6M4 381 aaKnown RBP10.58□□□□□ -0.72
HSPG2-203ENST00000374695 HSP90AA2PQ14568 343 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-203ENST00000374695 A0A0U1RQG5 324 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-203ENST00000374695 PLPPR3Q6T4P5 718 aa10.58□□□□□ -0.72
HSPG2-203ENST00000374695 CALRP27797 417 aaKnown RBP10.57□□□□□ -0.72
HSPG2-203ENST00000374695 ZBTB7CA1YPR0 619 aa10.56□□□□□ -0.72
HSPG2-203ENST00000374695 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
HSPG2-203ENST00000374695 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
HSPG2-203ENST00000374695 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-203ENST00000374695 FRAT1Q92837 279 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-203ENST00000374695 IPO8O15397 1037 aaKnown RBP10.53□□□□□ -0.72
HSPG2-203ENST00000374695 CHMP4AQ9BY43 222 aa10.53□□□□□ -0.72
HSPG2-203ENST00000374695 MAP7D2Q96T17 732 aa10.53□□□□□ -0.72
HSPG2-203ENST00000374695 CALD1Q05682 793 aaKnown RBP10.53□□□□□ -0.72
HSPG2-203ENST00000374695 RBM19Q9Y4C8 960 aaKnown RBP10.51□□□□□ -0.73
HSPG2-203ENST00000374695 CARD11Q9BXL7 1154 aa10.5□□□□□ -0.73
HSPG2-203ENST00000374695 GPS2Q13227 327 aa10.5□□□□□ -0.73
HSPG2-203ENST00000374695 GOLGA6L3A6NEY3 463 aa10.5□□□□□ -0.73
HSPG2-203ENST00000374695 KANK1Q14678 1352 aa10.5□□□□□ -0.73
HSPG2-203ENST00000374695 CEP164Q9UPV0 1460 aa10.5□□□□□ -0.73
HSPG2-203ENST00000374695 CEP162Q5TB80 1403 aa10.5□□□□□ -0.73
HSPG2-203ENST00000374695 TPM3P06753 285 aa10.5□□□□□ -0.73
HSPG2-203ENST00000374695 CCDC70Q6NSX1 233 aa10.49□□□□□ -0.73
HSPG2-203ENST00000374695 PRM3Q9NNZ6 103 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms