RNA–Protein interactions for RNA: ENST00000373809.2

CDK1-202, Transcript of cyclin dependent kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CDK1, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK1-202ENST00000373809 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
CDK1-202ENST00000373809 CHIC1Q5VXU3 224 aa25.87■■□□□ 1.73
CDK1-202ENST00000373809 SENP3Q9H4L4 574 aaPredicted RBP22.86■■□□□ 1.25
CDK1-202ENST00000373809 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
CDK1-202ENST00000373809 FOXD1Q16676 465 aa21.37■■□□□ 1.01
CDK1-202ENST00000373809 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
CDK1-202ENST00000373809 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
CDK1-202ENST00000373809 ADRA2BP18089 450 aa20.22■□□□□ 0.83
CDK1-202ENST00000373809 PIAS4Q8N2W9 510 aaPredicted RBP20■□□□□ 0.79
CDK1-202ENST00000373809 MSH5O43196 834 aa19.75■□□□□ 0.75
CDK1-202ENST00000373809 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
CDK1-202ENST00000373809 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
CDK1-202ENST00000373809 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
CDK1-202ENST00000373809 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
CDK1-202ENST00000373809 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
CDK1-202ENST00000373809 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
CDK1-202ENST00000373809 HOXD11P31277 338 aaPredicted RBP17.65■□□□□ 0.42
CDK1-202ENST00000373809 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.41
CDK1-202ENST00000373809 NCBP3Q53F19 620 aaKnown RBP17.58■□□□□ 0.4
CDK1-202ENST00000373809 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
CDK1-202ENST00000373809 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
CDK1-202ENST00000373809 KCNA4P22459 653 aa17.43■□□□□ 0.38
CDK1-202ENST00000373809 RNF39Q9H2S5 420 aa16.96■□□□□ 0.3
CDK1-202ENST00000373809 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
CDK1-202ENST00000373809 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
CDK1-202ENST00000373809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.282e-8■■■■□ 21.6
CDK1-202ENST00000373809 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
CDK1-202ENST00000373809 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
CDK1-202ENST00000373809 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
CDK1-202ENST00000373809 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
CDK1-202ENST00000373809 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
CDK1-202ENST00000373809 CAPN15O75808 1086 aa16.15■□□□□ 0.18
CDK1-202ENST00000373809 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
CDK1-202ENST00000373809 ZBTB22O15209 634 aa16.07■□□□□ 0.16
CDK1-202ENST00000373809 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
CDK1-202ENST00000373809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
CDK1-202ENST00000373809 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
CDK1-202ENST00000373809 DSG3P32926 999 aa16.01■□□□□ 0.15
CDK1-202ENST00000373809 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
CDK1-202ENST00000373809 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
CDK1-202ENST00000373809 APLP2Q06481 763 aa15.92■□□□□ 0.14
CDK1-202ENST00000373809 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
CDK1-202ENST00000373809 ABCB7O75027 752 aa15.86■□□□□ 0.13
CDK1-202ENST00000373809 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
CDK1-202ENST00000373809 POLA2Q14181 598 aa15.62■□□□□ 0.09
CDK1-202ENST00000373809 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
CDK1-202ENST00000373809 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
CDK1-202ENST00000373809 ATXN8OSP0DMR3 200 aa15.5■□□□□ 0.07
CDK1-202ENST00000373809 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
CDK1-202ENST00000373809 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
CDK1-202ENST00000373809 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
CDK1-202ENST00000373809 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
CDK1-202ENST00000373809 FBLN2P98095 1184 aa14.99□□□□□ -0.01
CDK1-202ENST00000373809 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
CDK1-202ENST00000373809 POTEHQ6S545 545 aa14.82□□□□□ -0.04
CDK1-202ENST00000373809 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
CDK1-202ENST00000373809 SPDYE2BA6NHP3 402 aa14.81□□□□□ -0.04
CDK1-202ENST00000373809 SPDYE6P0CI01 402 aa14.81□□□□□ -0.04
CDK1-202ENST00000373809 SPDYE2Q495Y8 402 aa14.81□□□□□ -0.04
CDK1-202ENST00000373809 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.04
CDK1-202ENST00000373809 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
CDK1-202ENST00000373809 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
CDK1-202ENST00000373809 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
CDK1-202ENST00000373809 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDK1-202ENST00000373809 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.08
CDK1-202ENST00000373809 CLEC11AQ9Y240 323 aa14.51□□□□□ -0.09
CDK1-202ENST00000373809 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
CDK1-202ENST00000373809 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
CDK1-202ENST00000373809 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
CDK1-202ENST00000373809 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
CDK1-202ENST00000373809 PRR29P0C7W0 189 aa14.27□□□□□ -0.12
CDK1-202ENST00000373809 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
CDK1-202ENST00000373809 HAX1O00165 279 aa14.15□□□□□ -0.14
CDK1-202ENST00000373809 PROM2Q8N271 834 aa14.14□□□□□ -0.15
CDK1-202ENST00000373809 EVX2Q03828 476 aa14.12□□□□□ -0.15
CDK1-202ENST00000373809 STAG3Q9UJ98 1225 aa14.09□□□□□ -0.15
CDK1-202ENST00000373809 FKBP8Q14318 412 aa14.07□□□□□ -0.16
CDK1-202ENST00000373809 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
CDK1-202ENST00000373809 SP7Q8TDD2 431 aaPredicted RBP14.02□□□□□ -0.16
CDK1-202ENST00000373809 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
CDK1-202ENST00000373809 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
CDK1-202ENST00000373809 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
CDK1-202ENST00000373809 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
CDK1-202ENST00000373809 MIER1Q8N108 512 aa13.74□□□□□ -0.21
CDK1-202ENST00000373809 GABBR2O75899 941 aa13.72□□□□□ -0.21
CDK1-202ENST00000373809 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
CDK1-202ENST00000373809 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDK1-202ENST00000373809 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
CDK1-202ENST00000373809 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
CDK1-202ENST00000373809 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
CDK1-202ENST00000373809 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
CDK1-202ENST00000373809 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
CDK1-202ENST00000373809 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
CDK1-202ENST00000373809 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
CDK1-202ENST00000373809 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
CDK1-202ENST00000373809 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
CDK1-202ENST00000373809 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
CDK1-202ENST00000373809 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
CDK1-202ENST00000373809 NUBP1P53384 320 aa13.47□□□□□ -0.25
CDK1-202ENST00000373809 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms