RNA–Protein interactions for RNA: ENST00000373647.8

RABGAP1-202, Transcript of RAB GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGAP1, Length 4,997 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-202ENST00000373647 NISCHQ9Y2I1 1504 aa23.22■■□□□ 1.31
RABGAP1-202ENST00000373647 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
RABGAP1-202ENST00000373647 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
RABGAP1-202ENST00000373647 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
RABGAP1-202ENST00000373647 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
RABGAP1-202ENST00000373647 NACADO15069 1562 aa18.86■□□□□ 0.61
RABGAP1-202ENST00000373647 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
RABGAP1-202ENST00000373647 ABCC9O60706 1549 aa18.73■□□□□ 0.59
RABGAP1-202ENST00000373647 RB1CC1Q8TDY2 1594 aa18.58■□□□□ 0.56
RABGAP1-202ENST00000373647 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
RABGAP1-202ENST00000373647 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
RABGAP1-202ENST00000373647 SHROOM4Q9ULL8 1493 aa18.19■□□□□ 0.5
RABGAP1-202ENST00000373647 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
RABGAP1-202ENST00000373647 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
RABGAP1-202ENST00000373647 PEG3Q9GZU2 1588 aa17.94■□□□□ 0.46
RABGAP1-202ENST00000373647 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
RABGAP1-202ENST00000373647 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
RABGAP1-202ENST00000373647 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
RABGAP1-202ENST00000373647 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
RABGAP1-202ENST00000373647 WIZO95785 1651 aa17.81■□□□□ 0.44
RABGAP1-202ENST00000373647 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
RABGAP1-202ENST00000373647 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
RABGAP1-202ENST00000373647 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
RABGAP1-202ENST00000373647 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
RABGAP1-202ENST00000373647 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
RABGAP1-202ENST00000373647 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
RABGAP1-202ENST00000373647 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
RABGAP1-202ENST00000373647 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
RABGAP1-202ENST00000373647 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
RABGAP1-202ENST00000373647 CC2D2AQ9P2K1 1620 aa17.29■□□□□ 0.36
RABGAP1-202ENST00000373647 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
RABGAP1-202ENST00000373647 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
RABGAP1-202ENST00000373647 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
RABGAP1-202ENST00000373647 CFTRP13569 1480 aa17■□□□□ 0.31
RABGAP1-202ENST00000373647 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
RABGAP1-202ENST00000373647 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
RABGAP1-202ENST00000373647 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
RABGAP1-202ENST00000373647 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
RABGAP1-202ENST00000373647 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
RABGAP1-202ENST00000373647 CUX1P39880 1505 aa16.76■□□□□ 0.27
RABGAP1-202ENST00000373647 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
RABGAP1-202ENST00000373647 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
RABGAP1-202ENST00000373647 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
RABGAP1-202ENST00000373647 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
RABGAP1-202ENST00000373647 NESP48681 1621 aa16.65■□□□□ 0.26
RABGAP1-202ENST00000373647 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
RABGAP1-202ENST00000373647 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
RABGAP1-202ENST00000373647 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
RABGAP1-202ENST00000373647 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
RABGAP1-202ENST00000373647 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
RABGAP1-202ENST00000373647 KIF21BO75037 1637 aa16.52■□□□□ 0.23
RABGAP1-202ENST00000373647 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
RABGAP1-202ENST00000373647 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.23
RABGAP1-202ENST00000373647 SOGA1O94964 1423 aa16.51■□□□□ 0.23
RABGAP1-202ENST00000373647 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
RABGAP1-202ENST00000373647 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
RABGAP1-202ENST00000373647 WDR62O43379 1518 aa16.45■□□□□ 0.22
RABGAP1-202ENST00000373647 EEA1Q15075 1411 aa16.45■□□□□ 0.22
RABGAP1-202ENST00000373647 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
RABGAP1-202ENST00000373647 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
RABGAP1-202ENST00000373647 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
RABGAP1-202ENST00000373647 PRXQ9BXM0 1461 aa16.4■□□□□ 0.22
RABGAP1-202ENST00000373647 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
RABGAP1-202ENST00000373647 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
RABGAP1-202ENST00000373647 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
RABGAP1-202ENST00000373647 CUX2O14529 1486 aa16.36■□□□□ 0.21
RABGAP1-202ENST00000373647 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
RABGAP1-202ENST00000373647 PBRM1Q86U86 1689 aa16.29■□□□□ 0.2
RABGAP1-202ENST00000373647 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.2
RABGAP1-202ENST00000373647 CUL7Q14999 1698 aa16.24■□□□□ 0.19
RABGAP1-202ENST00000373647 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
RABGAP1-202ENST00000373647 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
RABGAP1-202ENST00000373647 IGF1RP08069 1367 aa16.19■□□□□ 0.18
RABGAP1-202ENST00000373647 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
RABGAP1-202ENST00000373647 CTTNBP2Q8WZ74 1663 aa16.16■□□□□ 0.18
RABGAP1-202ENST00000373647 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
RABGAP1-202ENST00000373647 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
RABGAP1-202ENST00000373647 KIF27Q86VH2 1401 aa16.14■□□□□ 0.17
RABGAP1-202ENST00000373647 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
RABGAP1-202ENST00000373647 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
RABGAP1-202ENST00000373647 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
RABGAP1-202ENST00000373647 IFT140Q96RY7 1462 aa16.06■□□□□ 0.16
RABGAP1-202ENST00000373647 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
RABGAP1-202ENST00000373647 SAMD9Q5K651 1589 aa16.05■□□□□ 0.16
RABGAP1-202ENST00000373647 GAPVD1Q14C86 1478 aa16.01■□□□□ 0.15
RABGAP1-202ENST00000373647 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
RABGAP1-202ENST00000373647 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
RABGAP1-202ENST00000373647 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
RABGAP1-202ENST00000373647 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
RABGAP1-202ENST00000373647 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
RABGAP1-202ENST00000373647 CARMIL1Q5VZK9 1371 aa15.91■□□□□ 0.14
RABGAP1-202ENST00000373647 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.138e-7■■■■□ 23.2
RABGAP1-202ENST00000373647 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
RABGAP1-202ENST00000373647 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
RABGAP1-202ENST00000373647 MAGI1Q96QZ7 1491 aaPredicted RBP15.87■□□□□ 0.13
RABGAP1-202ENST00000373647 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
RABGAP1-202ENST00000373647 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
RABGAP1-202ENST00000373647 EFCAB5A4FU69 1503 aa15.85■□□□□ 0.13
RABGAP1-202ENST00000373647 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
RABGAP1-202ENST00000373647 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms