RNA–Protein interactions for RNA: ENST00000373585.7

DDX50-201, Transcript of DExD-box helicase 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX50, Length 2,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX50-201ENST00000373585 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
DDX50-201ENST00000373585 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.74
DDX50-201ENST00000373585 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
DDX50-201ENST00000373585 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
DDX50-201ENST00000373585 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
DDX50-201ENST00000373585 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
DDX50-201ENST00000373585 ABCC9O60706 1549 aa24.54■■□□□ 1.52
DDX50-201ENST00000373585 SUPT5HO00267 1087 aaKnown RBP24.42■■□□□ 1.5
DDX50-201ENST00000373585 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
DDX50-201ENST00000373585 SCRIBQ14160 1630 aa24.16■■□□□ 1.46
DDX50-201ENST00000373585 NACADO15069 1562 aa24.1■■□□□ 1.45
DDX50-201ENST00000373585 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
DDX50-201ENST00000373585 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
DDX50-201ENST00000373585 CECR2Q9BXF3 1484 aa23.54■■□□□ 1.36
DDX50-201ENST00000373585 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
DDX50-201ENST00000373585 UNC13AQ9UPW8 1703 aa23.42■■□□□ 1.34
DDX50-201ENST00000373585 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
DDX50-201ENST00000373585 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
DDX50-201ENST00000373585 WIZO95785 1651 aa23.21■■□□□ 1.31
DDX50-201ENST00000373585 BICRAQ9NZM4 1560 aa23.21■■□□□ 1.31
DDX50-201ENST00000373585 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
DDX50-201ENST00000373585 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
DDX50-201ENST00000373585 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
DDX50-201ENST00000373585 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
DDX50-201ENST00000373585 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
DDX50-201ENST00000373585 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
DDX50-201ENST00000373585 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
DDX50-201ENST00000373585 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
DDX50-201ENST00000373585 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
DDX50-201ENST00000373585 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
DDX50-201ENST00000373585 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
DDX50-201ENST00000373585 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
DDX50-201ENST00000373585 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
DDX50-201ENST00000373585 EHMT2Q96KQ7 1210 aa22.41■■□□□ 1.18
DDX50-201ENST00000373585 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
DDX50-201ENST00000373585 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
DDX50-201ENST00000373585 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
DDX50-201ENST00000373585 SOGA1O94964 1423 aa22.15■■□□□ 1.14
DDX50-201ENST00000373585 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
DDX50-201ENST00000373585 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
DDX50-201ENST00000373585 RUSC2Q8N2Y8 1516 aa22.06■■□□□ 1.12
DDX50-201ENST00000373585 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
DDX50-201ENST00000373585 CSRNP3Q8WYN3 585 aa21.96■■□□□ 1.11
DDX50-201ENST00000373585 CFTRP13569 1480 aa21.96■■□□□ 1.11
DDX50-201ENST00000373585 EEA1Q15075 1411 aa21.91■■□□□ 1.1
DDX50-201ENST00000373585 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
DDX50-201ENST00000373585 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
DDX50-201ENST00000373585 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
DDX50-201ENST00000373585 CUX1P39880 1505 aa21.81■■□□□ 1.08
DDX50-201ENST00000373585 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
DDX50-201ENST00000373585 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
DDX50-201ENST00000373585 TNIKQ9UKE5 1360 aa21.74■■□□□ 1.07
DDX50-201ENST00000373585 PPARGC1BQ86YN6 1023 aaKnown RBP21.74■■□□□ 1.07
DDX50-201ENST00000373585 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
DDX50-201ENST00000373585 GOLGA3Q08378 1498 aa21.73■■□□□ 1.07
DDX50-201ENST00000373585 CEP162Q5TB80 1403 aa21.73■■□□□ 1.07
DDX50-201ENST00000373585 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
DDX50-201ENST00000373585 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
DDX50-201ENST00000373585 NESP48681 1621 aa21.67■■□□□ 1.06
DDX50-201ENST00000373585 KIF21BO75037 1637 aa21.63■■□□□ 1.05
DDX50-201ENST00000373585 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
DDX50-201ENST00000373585 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
DDX50-201ENST00000373585 HRCP23327 699 aa21.58■■□□□ 1.05
DDX50-201ENST00000373585 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
DDX50-201ENST00000373585 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
DDX50-201ENST00000373585 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
DDX50-201ENST00000373585 TTBK1Q5TCY1 1321 aaPredicted RBP21.52■■□□□ 1.03
DDX50-201ENST00000373585 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
DDX50-201ENST00000373585 CUX2O14529 1486 aa21.49■■□□□ 1.03
DDX50-201ENST00000373585 CLIP1P30622 1438 aa21.47■■□□□ 1.03
DDX50-201ENST00000373585 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
DDX50-201ENST00000373585 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
DDX50-201ENST00000373585 TOPBP1Q92547 1522 aa21.41■■□□□ 1.02
DDX50-201ENST00000373585 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
DDX50-201ENST00000373585 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.02
DDX50-201ENST00000373585 IGF1RP08069 1367 aa21.38■■□□□ 1.01
DDX50-201ENST00000373585 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
DDX50-201ENST00000373585 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
DDX50-201ENST00000373585 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
DDX50-201ENST00000373585 VPS8Q8N3P4 1428 aa21.28■■□□□ 1
DDX50-201ENST00000373585 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
DDX50-201ENST00000373585 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
DDX50-201ENST00000373585 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
DDX50-201ENST00000373585 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
DDX50-201ENST00000373585 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
DDX50-201ENST00000373585 APLP2Q06481 763 aa21.17■□□□□ 0.98
DDX50-201ENST00000373585 ARHGAP35Q9NRY4 1499 aa21.13■□□□□ 0.97
DDX50-201ENST00000373585 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
DDX50-201ENST00000373585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
DDX50-201ENST00000373585 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
DDX50-201ENST00000373585 MRC2Q9UBG0 1479 aa21.05■□□□□ 0.96
DDX50-201ENST00000373585 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
DDX50-201ENST00000373585 P3H3Q8IVL6 736 aa21.02■□□□□ 0.96
DDX50-201ENST00000373585 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
DDX50-201ENST00000373585 TARBP1Q13395 1621 aaKnown RBP21.01■□□□□ 0.95
DDX50-201ENST00000373585 CUL7Q14999 1698 aa21.01■□□□□ 0.95
DDX50-201ENST00000373585 ZEB1P37275 1124 aaPredicted RBP20.98■□□□□ 0.95
DDX50-201ENST00000373585 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
DDX50-201ENST00000373585 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
DDX50-201ENST00000373585 HNRNPUL2Q1KMD3 747 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms