RNA–Protein interactions for RNA: ENST00000373257.7

LPIN3-201, Transcript of lipin 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LPIN3, Length 4,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN3-201ENST00000373257 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
LPIN3-201ENST00000373257 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
LPIN3-201ENST00000373257 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
LPIN3-201ENST00000373257 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
LPIN3-201ENST00000373257 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
LPIN3-201ENST00000373257 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
LPIN3-201ENST00000373257 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
LPIN3-201ENST00000373257 ABCC9O60706 1549 aa19.25■□□□□ 0.67
LPIN3-201ENST00000373257 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
LPIN3-201ENST00000373257 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
LPIN3-201ENST00000373257 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
LPIN3-201ENST00000373257 APLP2Q06481 763 aa19.04■□□□□ 0.64
LPIN3-201ENST00000373257 PABPN1Q86U42 306 aaKnown RBP eCLIP18.98■□□□□ 0.638e-8■■■■□ 21.3
LPIN3-201ENST00000373257 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
LPIN3-201ENST00000373257 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.62
LPIN3-201ENST00000373257 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.6
LPIN3-201ENST00000373257 PPARGC1BQ86YN6 1023 aaKnown RBP18.81■□□□□ 0.6
LPIN3-201ENST00000373257 ATP1B4Q9UN42 357 aaPredicted RBP18.76■□□□□ 0.59
LPIN3-201ENST00000373257 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.57
LPIN3-201ENST00000373257 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
LPIN3-201ENST00000373257 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
LPIN3-201ENST00000373257 CCDC180Q9P1Z9 1646 aa18.42■□□□□ 0.54
LPIN3-201ENST00000373257 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
LPIN3-201ENST00000373257 ITGAEP38570 1179 aa18.26■□□□□ 0.51
LPIN3-201ENST00000373257 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
LPIN3-201ENST00000373257 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
LPIN3-201ENST00000373257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
LPIN3-201ENST00000373257 HRCP23327 699 aa18.04■□□□□ 0.48
LPIN3-201ENST00000373257 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
LPIN3-201ENST00000373257 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
LPIN3-201ENST00000373257 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
LPIN3-201ENST00000373257 FBLN2P98095 1184 aa17.88■□□□□ 0.45
LPIN3-201ENST00000373257 YTHDC1Q96MU7 727 aaKnown RBP17.88■□□□□ 0.45
LPIN3-201ENST00000373257 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
LPIN3-201ENST00000373257 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
LPIN3-201ENST00000373257 NACADO15069 1562 aa17.82■□□□□ 0.44
LPIN3-201ENST00000373257 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
LPIN3-201ENST00000373257 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.43
LPIN3-201ENST00000373257 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
LPIN3-201ENST00000373257 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
LPIN3-201ENST00000373257 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
LPIN3-201ENST00000373257 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
LPIN3-201ENST00000373257 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
LPIN3-201ENST00000373257 POLR3GLQ9BT43 218 aa17.65■□□□□ 0.42
LPIN3-201ENST00000373257 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
LPIN3-201ENST00000373257 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
LPIN3-201ENST00000373257 TRIM52Q96A61 297 aa17.56■□□□□ 0.4
LPIN3-201ENST00000373257 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
LPIN3-201ENST00000373257 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
LPIN3-201ENST00000373257 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
LPIN3-201ENST00000373257 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
LPIN3-201ENST00000373257 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
LPIN3-201ENST00000373257 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
LPIN3-201ENST00000373257 ZNF326Q5BKZ1 582 aaKnown RBP17.35■□□□□ 0.37
LPIN3-201ENST00000373257 NEFLP07196 543 aa17.34■□□□□ 0.37
LPIN3-201ENST00000373257 CLIP1P30622 1438 aa17.3■□□□□ 0.36
LPIN3-201ENST00000373257 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
LPIN3-201ENST00000373257 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
LPIN3-201ENST00000373257 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
LPIN3-201ENST00000373257 SOGA1O94964 1423 aa17.24■□□□□ 0.35
LPIN3-201ENST00000373257 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
LPIN3-201ENST00000373257 CHIC2Q9UKJ5 165 aa17.22■□□□□ 0.35
LPIN3-201ENST00000373257 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
LPIN3-201ENST00000373257 WIZO95785 1651 aa17.21■□□□□ 0.35
LPIN3-201ENST00000373257 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
LPIN3-201ENST00000373257 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
LPIN3-201ENST00000373257 EEA1Q15075 1411 aa17.18■□□□□ 0.34
LPIN3-201ENST00000373257 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
LPIN3-201ENST00000373257 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
LPIN3-201ENST00000373257 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
LPIN3-201ENST00000373257 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
LPIN3-201ENST00000373257 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
LPIN3-201ENST00000373257 CUX2O14529 1486 aa17.03■□□□□ 0.32
LPIN3-201ENST00000373257 SMARCA2P51531 1590 aa17.02■□□□□ 0.32
LPIN3-201ENST00000373257 ERCC6Q03468 1493 aa17■□□□□ 0.31
LPIN3-201ENST00000373257 ATAD2BQ9ULI0 1458 aa17■□□□□ 0.31
LPIN3-201ENST00000373257 ERICH6Q7L0X2 663 aa17■□□□□ 0.31
LPIN3-201ENST00000373257 RRP7BPQ9NSQ0 103 aa17■□□□□ 0.31
LPIN3-201ENST00000373257 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
LPIN3-201ENST00000373257 ANP32CO43423 234 aa16.99■□□□□ 0.31
LPIN3-201ENST00000373257 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
LPIN3-201ENST00000373257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■□□□□ 11.1
LPIN3-201ENST00000373257 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
LPIN3-201ENST00000373257 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
LPIN3-201ENST00000373257 TONSLQ96HA7 1378 aa16.96■□□□□ 0.31
LPIN3-201ENST00000373257 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
LPIN3-201ENST00000373257 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
LPIN3-201ENST00000373257 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
LPIN3-201ENST00000373257 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
LPIN3-201ENST00000373257 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
LPIN3-201ENST00000373257 DDX10Q13206 875 aaKnown RBP16.9■□□□□ 0.3
LPIN3-201ENST00000373257 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
LPIN3-201ENST00000373257 GTF3C3Q9Y5Q9 886 aa16.89■□□□□ 0.29
LPIN3-201ENST00000373257 BCANQ96GW7 911 aa16.88■□□□□ 0.29
LPIN3-201ENST00000373257 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
LPIN3-201ENST00000373257 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
LPIN3-201ENST00000373257 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
LPIN3-201ENST00000373257 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
LPIN3-201ENST00000373257 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
LPIN3-201ENST00000373257 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms