RNA–Protein interactions for RNA: ENST00000372805.7

CAP1-206, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAP1, Length 2,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-206ENST00000372805 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
CAP1-206ENST00000372805 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
CAP1-206ENST00000372805 AEBP2Q6ZN18 517 aaPredicted RBP13.88□□□□□ -0.19
CAP1-206ENST00000372805 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
CAP1-206ENST00000372805 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
CAP1-206ENST00000372805 CCDC180Q9P1Z9 1646 aa13.51□□□□□ -0.25
CAP1-206ENST00000372805 ZCCHC6Q5VYS8 1495 aaKnown RBP13.51□□□□□ -0.25
CAP1-206ENST00000372805 ABCC9O60706 1549 aa13.34□□□□□ -0.27
CAP1-206ENST00000372805 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
CAP1-206ENST00000372805 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
CAP1-206ENST00000372805 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
CAP1-206ENST00000372805 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
CAP1-206ENST00000372805 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
CAP1-206ENST00000372805 LOC105371045A0A1W2PR82 267 aa12.93□□□□□ -0.34
CAP1-206ENST00000372805 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
CAP1-206ENST00000372805 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
CAP1-206ENST00000372805 FAM9AQ8IZU1 332 aaPredicted RBP12.75□□□□□ -0.37
CAP1-206ENST00000372805 HRCP23327 699 aa12.72□□□□□ -0.37
CAP1-206ENST00000372805 RSF1Q96T23 1441 aaPredicted RBP12.72□□□□□ -0.37
CAP1-206ENST00000372805 PPARGC1BQ86YN6 1023 aaKnown RBP12.7□□□□□ -0.38
CAP1-206ENST00000372805 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
CAP1-206ENST00000372805 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
CAP1-206ENST00000372805 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
CAP1-206ENST00000372805 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
CAP1-206ENST00000372805 WIZO95785 1651 aa12.53□□□□□ -0.4
CAP1-206ENST00000372805 NACADO15069 1562 aa12.51□□□□□ -0.41
CAP1-206ENST00000372805 TRIM26Q12899 539 aaPredicted RBP12.46□□□□□ -0.41
CAP1-206ENST00000372805 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
CAP1-206ENST00000372805 TTBK1Q5TCY1 1321 aaPredicted RBP12.36□□□□□ -0.43
CAP1-206ENST00000372805 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
CAP1-206ENST00000372805 UNC13AQ9UPW8 1703 aa12.32□□□□□ -0.44
CAP1-206ENST00000372805 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
CAP1-206ENST00000372805 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
CAP1-206ENST00000372805 SMARCA4P51532 1647 aa12.22□□□□□ -0.45
CAP1-206ENST00000372805 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.45
CAP1-206ENST00000372805 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
CAP1-206ENST00000372805 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
CAP1-206ENST00000372805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
CAP1-206ENST00000372805 SMARCA2P51531 1590 aa12.16□□□□□ -0.46
CAP1-206ENST00000372805 SOGA1O94964 1423 aa12.15□□□□□ -0.47
CAP1-206ENST00000372805 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
CAP1-206ENST00000372805 RUSC2Q8N2Y8 1516 aa12.12□□□□□ -0.47
CAP1-206ENST00000372805 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
CAP1-206ENST00000372805 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
CAP1-206ENST00000372805 ZEB1P37275 1124 aaPredicted RBP12.07□□□□□ -0.48
CAP1-206ENST00000372805 CCER1Q8TC90 406 aaPredicted RBP12.07□□□□□ -0.48
CAP1-206ENST00000372805 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
CAP1-206ENST00000372805 CEP162Q5TB80 1403 aa12.03□□□□□ -0.48
CAP1-206ENST00000372805 CSRNP3Q8WYN3 585 aa12.01□□□□□ -0.49
CAP1-206ENST00000372805 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.492e-8■■■□□ 16.7
CAP1-206ENST00000372805 SYNJ1O43426 1573 aa11.95□□□□□ -0.5
CAP1-206ENST00000372805 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
CAP1-206ENST00000372805 TNIKQ9UKE5 1360 aa11.91□□□□□ -0.5
CAP1-206ENST00000372805 ATAD2BQ9ULI0 1458 aa11.9□□□□□ -0.5
CAP1-206ENST00000372805 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.51
CAP1-206ENST00000372805 GOLGA3Q08378 1498 aa11.88□□□□□ -0.51
CAP1-206ENST00000372805 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
CAP1-206ENST00000372805 EEA1Q15075 1411 aa11.83□□□□□ -0.52
CAP1-206ENST00000372805 RAPGEF2Q9Y4G8 1499 aa11.82□□□□□ -0.52
CAP1-206ENST00000372805 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
CAP1-206ENST00000372805 CLIP1P30622 1438 aa11.8□□□□□ -0.52
CAP1-206ENST00000372805 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
CAP1-206ENST00000372805 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
CAP1-206ENST00000372805 CUX2O14529 1486 aa11.78□□□□□ -0.52
CAP1-206ENST00000372805 APLP2Q06481 763 aa11.78□□□□□ -0.52
CAP1-206ENST00000372805 KIF21BO75037 1637 aa11.74□□□□□ -0.53
CAP1-206ENST00000372805 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
CAP1-206ENST00000372805 NEUROD1Q13562 356 aa11.71□□□□□ -0.54
CAP1-206ENST00000372805 YTHDC1Q96MU7 727 aaKnown RBP11.71□□□□□ -0.54
CAP1-206ENST00000372805 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
CAP1-206ENST00000372805 VPS8Q8N3P4 1428 aa11.7□□□□□ -0.54
CAP1-206ENST00000372805 PHF23Q9BUL5 403 aaPredicted RBP11.67□□□□□ -0.54
CAP1-206ENST00000372805 ITGAEP38570 1179 aa11.67□□□□□ -0.54
CAP1-206ENST00000372805 CUX1P39880 1505 aa11.66□□□□□ -0.54
CAP1-206ENST00000372805 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
CAP1-206ENST00000372805 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
CAP1-206ENST00000372805 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
CAP1-206ENST00000372805 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
CAP1-206ENST00000372805 GTF3C3Q9Y5Q9 886 aa11.6□□□□□ -0.55
CAP1-206ENST00000372805 NCAPD3P42695 1498 aa11.59□□□□□ -0.55
CAP1-206ENST00000372805 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
CAP1-206ENST00000372805 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
CAP1-206ENST00000372805 P3H3Q8IVL6 736 aa11.58□□□□□ -0.56
CAP1-206ENST00000372805 ATP1B4Q9UN42 357 aaPredicted RBP11.58□□□□□ -0.56
CAP1-206ENST00000372805 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
CAP1-206ENST00000372805 MIER1Q8N108 512 aa11.57□□□□□ -0.56
CAP1-206ENST00000372805 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
CAP1-206ENST00000372805 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
CAP1-206ENST00000372805 CFTRP13569 1480 aa11.54□□□□□ -0.56
CAP1-206ENST00000372805 CENPBP07199 599 aaPredicted RBP11.54□□□□□ -0.56
CAP1-206ENST00000372805 ERICH3Q5RHP9 1530 aa11.52□□□□□ -0.56
CAP1-206ENST00000372805 ARHGAP35Q9NRY4 1499 aa11.49□□□□□ -0.57
CAP1-206ENST00000372805 FGD5Q6ZNL6 1462 aa11.47□□□□□ -0.57
CAP1-206ENST00000372805 DHX57Q6P158 1386 aaKnown RBP11.46□□□□□ -0.57
CAP1-206ENST00000372805 IGF1RP08069 1367 aa11.46□□□□□ -0.58
CAP1-206ENST00000372805 CADPSQ9ULU8 1353 aa11.45□□□□□ -0.58
CAP1-206ENST00000372805 PRDM2Q13029 1718 aa11.44□□□□□ -0.58
CAP1-206ENST00000372805 NESP48681 1621 aa11.44□□□□□ -0.58
CAP1-206ENST00000372805 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
CAP1-206ENST00000372805 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms