RNA–Protein interactions for RNA: ENST00000371655.3

RAB3B-201, Transcript of RAB3B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3B, Length 12,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3B-201ENST00000371655 NISCHQ9Y2I1 1504 aa11.82□□□□□ -0.52
RAB3B-201ENST00000371655 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
RAB3B-201ENST00000371655 SUPT5HO00267 1087 aaKnown RBP10.65□□□□□ -0.7
RAB3B-201ENST00000371655 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
RAB3B-201ENST00000371655 APLP2Q06481 763 aa10.04□□□□□ -0.8
RAB3B-201ENST00000371655 TRIM41Q8WV44 630 aa10.02□□□□□ -0.8
RAB3B-201ENST00000371655 FAM9AQ8IZU1 332 aaPredicted RBP9.94□□□□□ -0.82
RAB3B-201ENST00000371655 CCDC180Q9P1Z9 1646 aa9.91□□□□□ -0.82
RAB3B-201ENST00000371655 EHMT2Q96KQ7 1210 aa9.89□□□□□ -0.83
RAB3B-201ENST00000371655 ABCC9O60706 1549 aa9.87□□□□□ -0.83
RAB3B-201ENST00000371655 ZCCHC6Q5VYS8 1495 aaKnown RBP9.86□□□□□ -0.83
RAB3B-201ENST00000371655 ZEB1P37275 1124 aaPredicted RBP9.82□□□□□ -0.84
RAB3B-201ENST00000371655 CHIC1Q5VXU3 224 aa9.81□□□□□ -0.84
RAB3B-201ENST00000371655 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
RAB3B-201ENST00000371655 PCGF6Q9BYE7 350 aa9.78□□□□□ -0.84
RAB3B-201ENST00000371655 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
RAB3B-201ENST00000371655 TRIM26Q12899 539 aaPredicted RBP9.62□□□□□ -0.87
RAB3B-201ENST00000371655 PELP1Q8IZL8 1130 aaKnown RBP9.61□□□□□ -0.87
RAB3B-201ENST00000371655 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
RAB3B-201ENST00000371655 RANGAP1P46060 587 aaPredicted RBP9.61□□□□□ -0.87
RAB3B-201ENST00000371655 TTBK1Q5TCY1 1321 aaPredicted RBP9.58□□□□□ -0.88
RAB3B-201ENST00000371655 CCER1Q8TC90 406 aaPredicted RBP9.58□□□□□ -0.88
RAB3B-201ENST00000371655 SCRIBQ14160 1630 aa9.56□□□□□ -0.88
RAB3B-201ENST00000371655 NACADO15069 1562 aa9.54□□□□□ -0.88
RAB3B-201ENST00000371655 ATP1B4Q9UN42 357 aaPredicted RBP9.53□□□□□ -0.88
RAB3B-201ENST00000371655 RB1CC1Q8TDY2 1594 aa9.53□□□□□ -0.88
RAB3B-201ENST00000371655 LOC105371045A0A1W2PR82 267 aa9.51□□□□□ -0.89
RAB3B-201ENST00000371655 CENPBP07199 599 aaPredicted RBP9.47□□□□□ -0.89
RAB3B-201ENST00000371655 HRCP23327 699 aa9.45□□□□□ -0.9
RAB3B-201ENST00000371655 CSRNP3Q8WYN3 585 aa9.43□□□□□ -0.9
RAB3B-201ENST00000371655 MYO15BQ96JP2 1530 aa9.42□□□□□ -0.9
RAB3B-201ENST00000371655 RSF1Q96T23 1441 aaPredicted RBP9.38□□□□□ -0.91
RAB3B-201ENST00000371655 PPARGC1BQ86YN6 1023 aaKnown RBP9.35□□□□□ -0.91
RAB3B-201ENST00000371655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.34□□□□□ -0.91
RAB3B-201ENST00000371655 HNRNPUL2Q1KMD3 747 aaKnown RBP9.34□□□□□ -0.91
RAB3B-201ENST00000371655 EEA1Q15075 1411 aa9.32□□□□□ -0.92
RAB3B-201ENST00000371655 BAZ1AQ9NRL2 1556 aaPredicted RBP9.3□□□□□ -0.92
RAB3B-201ENST00000371655 ITGAEP38570 1179 aa9.27□□□□□ -0.93
RAB3B-201ENST00000371655 BAZ1BQ9UIG0 1483 aaKnown RBP9.22□□□□□ -0.93
RAB3B-201ENST00000371655 NEFLP07196 543 aa9.21□□□□□ -0.93
RAB3B-201ENST00000371655 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
RAB3B-201ENST00000371655 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
RAB3B-201ENST00000371655 FAM50AQ14320 339 aaKnown RBP9.17□□□□□ -0.94
RAB3B-201ENST00000371655 MYT1LQ9UL68 1186 aa9.15□□□□□ -0.94
RAB3B-201ENST00000371655 CECR2Q9BXF3 1484 aa9.14□□□□□ -0.95
RAB3B-201ENST00000371655 GOLGA3Q08378 1498 aa9.13□□□□□ -0.95
RAB3B-201ENST00000371655 CLIP1P30622 1438 aa9.11□□□□□ -0.95
RAB3B-201ENST00000371655 KIF27Q86VH2 1401 aa9.11□□□□□ -0.95
RAB3B-201ENST00000371655 TNIKQ9UKE5 1360 aa9.1□□□□□ -0.95
RAB3B-201ENST00000371655 FBLN2P98095 1184 aa9.1□□□□□ -0.95
RAB3B-201ENST00000371655 SMARCA2P51531 1590 aa9.09□□□□□ -0.95
RAB3B-201ENST00000371655 CEP164Q9UPV0 1460 aa9.09□□□□□ -0.96
RAB3B-201ENST00000371655 YTHDC1Q96MU7 727 aaKnown RBP9.08□□□□□ -0.96
RAB3B-201ENST00000371655 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
RAB3B-201ENST00000371655 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
RAB3B-201ENST00000371655 DIEXFQ68CQ4 756 aaKnown RBP9.06□□□□□ -0.96
RAB3B-201ENST00000371655 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
RAB3B-201ENST00000371655 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
RAB3B-201ENST00000371655 CEP162Q5TB80 1403 aa9.04□□□□□ -0.96
RAB3B-201ENST00000371655 ZNF316A6NFI3 1004 aaPredicted RBP9.03□□□□□ -0.96
RAB3B-201ENST00000371655 TOP2AP11388 1531 aaKnown RBP9.03□□□□□ -0.96
RAB3B-201ENST00000371655 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
RAB3B-201ENST00000371655 NEUROD1Q13562 356 aa8.98□□□□□ -0.97
RAB3B-201ENST00000371655 POLR3GLQ9BT43 218 aa8.98□□□□□ -0.97
RAB3B-201ENST00000371655 ERICH6Q7L0X2 663 aa8.98□□□□□ -0.97
RAB3B-201ENST00000371655 CHMP7Q8WUX9 453 aaPredicted RBP8.98□□□□□ -0.97
RAB3B-201ENST00000371655 MTUS2Q5JR59 1369 aa8.97□□□□□ -0.97
RAB3B-201ENST00000371655 ANP32CO43423 234 aa8.96□□□□□ -0.98
RAB3B-201ENST00000371655 FHAD1B1AJZ9 1412 aa8.93□□□□□ -0.98
RAB3B-201ENST00000371655 ATAD2BQ9ULI0 1458 aa8.93□□□□□ -0.98
RAB3B-201ENST00000371655 PDS5BQ9NTI5 1447 aa8.93□□□□□ -0.98
RAB3B-201ENST00000371655 SMARCA4P51532 1647 aa8.93□□□□□ -0.98
RAB3B-201ENST00000371655 ZNF777Q9ULD5 760 aaPredicted RBP8.93□□□□□ -0.98
RAB3B-201ENST00000371655 TONSLQ96HA7 1378 aa8.92□□□□□ -0.98
RAB3B-201ENST00000371655 CARMIL1Q5VZK9 1371 aa8.91□□□□□ -0.98
RAB3B-201ENST00000371655 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
RAB3B-201ENST00000371655 ARID3CA6NKF2 412 aa8.91□□□□□ -0.98
RAB3B-201ENST00000371655 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.98
RAB3B-201ENST00000371655 CUX2O14529 1486 aa8.9□□□□□ -0.99
RAB3B-201ENST00000371655 TSPY4P0CV99 314 aa8.9□□□□□ -0.99
RAB3B-201ENST00000371655 TSPY10P0CW01 314 aa8.9□□□□□ -0.99
RAB3B-201ENST00000371655 SOGA1O94964 1423 aa8.88□□□□□ -0.99
RAB3B-201ENST00000371655 MYT1Q01538 1121 aa8.88□□□□□ -0.99
RAB3B-201ENST00000371655 CLSPNQ9HAW4 1339 aa8.88□□□□□ -0.99
RAB3B-201ENST00000371655 VPS8Q8N3P4 1428 aa8.87□□□□□ -0.99
RAB3B-201ENST00000371655 ZNF326Q5BKZ1 582 aaKnown RBP8.87□□□□□ -0.99
RAB3B-201ENST00000371655 PLEKHD1A6NEE1 506 aa8.86□□□□□ -0.99
RAB3B-201ENST00000371655 WIZO95785 1651 aa8.86□□□□□ -0.99
RAB3B-201ENST00000371655 ERCC6Q03468 1493 aa8.86□□□□□ -0.99
RAB3B-201ENST00000371655 NCAPD3P42695 1498 aa8.83□□□□□ -1
RAB3B-201ENST00000371655 ABCC8Q09428 1581 aa8.83□□□□□ -1
RAB3B-201ENST00000371655 SLC4A1APQ9BWU0 796 aaKnown RBP8.81□□□□□ -1
RAB3B-201ENST00000371655 FMN1Q68DA7 1419 aa8.8□□□□□ -1
RAB3B-201ENST00000371655 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
RAB3B-201ENST00000371655 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
RAB3B-201ENST00000371655 CCNB3Q8WWL7 1395 aa8.8□□□□□ -1
RAB3B-201ENST00000371655 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
RAB3B-201ENST00000371655 RAPGEF2Q9Y4G8 1499 aa8.78□□□□□ -1
RAB3B-201ENST00000371655 ESF1Q9H501 851 aaKnown RBP8.78□□□□□ -1
RAB3B-201ENST00000371655 CFDP1Q9UEE9 299 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms