RNA–Protein interactions for RNA: ENST00000370508.5

GOT1-201, Transcript of glutamic-oxaloacetic transaminase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GOT1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOT1-201ENST00000370508 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.49
GOT1-201ENST00000370508 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
GOT1-201ENST00000370508 ZCCHC6Q5VYS8 1495 aaKnown RBP20.54■□□□□ 0.88
GOT1-201ENST00000370508 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
GOT1-201ENST00000370508 DCAF8L2P0C7V8 631 aa20.1■□□□□ 0.81
GOT1-201ENST00000370508 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
GOT1-201ENST00000370508 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
GOT1-201ENST00000370508 ABCC9O60706 1549 aa19.74■□□□□ 0.75
GOT1-201ENST00000370508 NACADO15069 1562 aa19.73■□□□□ 0.75
GOT1-201ENST00000370508 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
GOT1-201ENST00000370508 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
GOT1-201ENST00000370508 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
GOT1-201ENST00000370508 RSF1Q96T23 1441 aaPredicted RBP18.99■□□□□ 0.63
GOT1-201ENST00000370508 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
GOT1-201ENST00000370508 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
GOT1-201ENST00000370508 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
GOT1-201ENST00000370508 MROH2BQ7Z745 1585 aa18.78■□□□□ 0.6
GOT1-201ENST00000370508 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
GOT1-201ENST00000370508 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
GOT1-201ENST00000370508 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
GOT1-201ENST00000370508 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
GOT1-201ENST00000370508 WIZO95785 1651 aa18.63■□□□□ 0.57
GOT1-201ENST00000370508 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
GOT1-201ENST00000370508 PEG3Q9GZU2 1588 aa18.49■□□□□ 0.55
GOT1-201ENST00000370508 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
GOT1-201ENST00000370508 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
GOT1-201ENST00000370508 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
GOT1-201ENST00000370508 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
GOT1-201ENST00000370508 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
GOT1-201ENST00000370508 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
GOT1-201ENST00000370508 HMGXB3Q12766 1538 aa18.19■□□□□ 0.5
GOT1-201ENST00000370508 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
GOT1-201ENST00000370508 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
GOT1-201ENST00000370508 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
GOT1-201ENST00000370508 EEA1Q15075 1411 aa17.93■□□□□ 0.46
GOT1-201ENST00000370508 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
GOT1-201ENST00000370508 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
GOT1-201ENST00000370508 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
GOT1-201ENST00000370508 CFTRP13569 1480 aa17.82■□□□□ 0.44
GOT1-201ENST00000370508 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
GOT1-201ENST00000370508 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
GOT1-201ENST00000370508 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
GOT1-201ENST00000370508 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
GOT1-201ENST00000370508 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
GOT1-201ENST00000370508 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
GOT1-201ENST00000370508 SOGA1O94964 1423 aa17.68■□□□□ 0.42
GOT1-201ENST00000370508 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
GOT1-201ENST00000370508 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
GOT1-201ENST00000370508 TNIKQ9UKE5 1360 aa17.58■□□□□ 0.41
GOT1-201ENST00000370508 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
GOT1-201ENST00000370508 KIF21BO75037 1637 aa17.57■□□□□ 0.4
GOT1-201ENST00000370508 CUX1P39880 1505 aa17.56■□□□□ 0.4
GOT1-201ENST00000370508 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
GOT1-201ENST00000370508 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
GOT1-201ENST00000370508 RUSC2Q8N2Y8 1516 aa17.53■□□□□ 0.4
GOT1-201ENST00000370508 KIF27Q86VH2 1401 aa17.52■□□□□ 0.4
GOT1-201ENST00000370508 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
GOT1-201ENST00000370508 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
GOT1-201ENST00000370508 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
GOT1-201ENST00000370508 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
GOT1-201ENST00000370508 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
GOT1-201ENST00000370508 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
GOT1-201ENST00000370508 HRCP23327 699 aa17.42■□□□□ 0.38
GOT1-201ENST00000370508 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
GOT1-201ENST00000370508 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
GOT1-201ENST00000370508 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
GOT1-201ENST00000370508 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
GOT1-201ENST00000370508 NESP48681 1621 aa17.35■□□□□ 0.37
GOT1-201ENST00000370508 CUX2O14529 1486 aa17.34■□□□□ 0.37
GOT1-201ENST00000370508 TOPBP1Q92547 1522 aa17.33■□□□□ 0.36
GOT1-201ENST00000370508 CLIP1P30622 1438 aa17.32■□□□□ 0.36
GOT1-201ENST00000370508 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.35
GOT1-201ENST00000370508 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
GOT1-201ENST00000370508 IGF1RP08069 1367 aa17.23■□□□□ 0.35
GOT1-201ENST00000370508 APLP2Q06481 763 aa17.21■□□□□ 0.35
GOT1-201ENST00000370508 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.35
GOT1-201ENST00000370508 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.34
GOT1-201ENST00000370508 CARMIL1Q5VZK9 1371 aa17.2■□□□□ 0.34
GOT1-201ENST00000370508 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
GOT1-201ENST00000370508 CUL7Q14999 1698 aa17.17■□□□□ 0.34
GOT1-201ENST00000370508 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
GOT1-201ENST00000370508 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
GOT1-201ENST00000370508 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
GOT1-201ENST00000370508 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
GOT1-201ENST00000370508 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.33
GOT1-201ENST00000370508 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
GOT1-201ENST00000370508 RANGAP1P46060 587 aaPredicted RBP17.06■□□□□ 0.32
GOT1-201ENST00000370508 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
GOT1-201ENST00000370508 PPARGC1BQ86YN6 1023 aaKnown RBP17.04■□□□□ 0.32
GOT1-201ENST00000370508 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
GOT1-201ENST00000370508 WDR62O43379 1518 aa17.02■□□□□ 0.31
GOT1-201ENST00000370508 ARAP1Q96P48 1450 aa17.02■□□□□ 0.31
GOT1-201ENST00000370508 TARBP1Q13395 1621 aaKnown RBP17.01■□□□□ 0.31
GOT1-201ENST00000370508 IFT140Q96RY7 1462 aa17■□□□□ 0.31
GOT1-201ENST00000370508 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
GOT1-201ENST00000370508 ARHGAP35Q9NRY4 1499 aa16.99■□□□□ 0.31
GOT1-201ENST00000370508 FHAD1B1AJZ9 1412 aa16.98■□□□□ 0.31
GOT1-201ENST00000370508 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
GOT1-201ENST00000370508 CTTNBP2Q8WZ74 1663 aa16.96■□□□□ 0.3
GOT1-201ENST00000370508 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms