RNA–Protein interactions for RNA: ENST00000369849.8

INA-201, Transcript of internexin neuronal intermediate filament protein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene INA, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INA-201ENST00000369849 NISCHQ9Y2I1 1504 aa32.59■■■□□ 2.81
INA-201ENST00000369849 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
INA-201ENST00000369849 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
INA-201ENST00000369849 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
INA-201ENST00000369849 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
INA-201ENST00000369849 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
INA-201ENST00000369849 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
INA-201ENST00000369849 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
INA-201ENST00000369849 PCGF6Q9BYE7 350 aa27.2■■□□□ 1.95
INA-201ENST00000369849 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
INA-201ENST00000369849 EHMT2Q96KQ7 1210 aa26.97■■□□□ 1.91
INA-201ENST00000369849 PPARGC1BQ86YN6 1023 aaKnown RBP26.85■■□□□ 1.89
INA-201ENST00000369849 HRCP23327 699 aa26.8■■□□□ 1.88
INA-201ENST00000369849 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
INA-201ENST00000369849 ABCC9O60706 1549 aa26.44■■□□□ 1.82
INA-201ENST00000369849 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
INA-201ENST00000369849 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
INA-201ENST00000369849 DCAF1Q9Y4B6 1507 aa26.21■■□□□ 1.79
INA-201ENST00000369849 TRIM26Q12899 539 aaPredicted RBP26.12■■□□□ 1.77
INA-201ENST00000369849 RSF1Q96T23 1441 aaPredicted RBP26.09■■□□□ 1.77
INA-201ENST00000369849 TTBK1Q5TCY1 1321 aaPredicted RBP26.03■■□□□ 1.76
INA-201ENST00000369849 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
INA-201ENST00000369849 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
INA-201ENST00000369849 NACADO15069 1562 aa25.62■■□□□ 1.69
INA-201ENST00000369849 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
INA-201ENST00000369849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.57■■□□□ 1.68
INA-201ENST00000369849 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
INA-201ENST00000369849 WIZO95785 1651 aa25.44■■□□□ 1.66
INA-201ENST00000369849 CCER1Q8TC90 406 aaPredicted RBP25.41■■□□□ 1.66
INA-201ENST00000369849 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.65
INA-201ENST00000369849 RANGAP1P46060 587 aaPredicted RBP25.37■■□□□ 1.65
INA-201ENST00000369849 UBTFP17480 764 aaKnown RBP25.3■■□□□ 1.64
INA-201ENST00000369849 ABCC8Q09428 1581 aa25.18■■□□□ 1.62
INA-201ENST00000369849 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
INA-201ENST00000369849 SOGA1O94964 1423 aa25.05■■□□□ 1.6
INA-201ENST00000369849 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
INA-201ENST00000369849 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
INA-201ENST00000369849 HNRNPUL2Q1KMD3 747 aaKnown RBP24.97■■□□□ 1.59
INA-201ENST00000369849 RUSC2Q8N2Y8 1516 aa24.95■■□□□ 1.59
INA-201ENST00000369849 CSRNP3Q8WYN3 585 aa24.95■■□□□ 1.58
INA-201ENST00000369849 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
INA-201ENST00000369849 CEP162Q5TB80 1403 aa24.86■■□□□ 1.57
INA-201ENST00000369849 DIEXFQ68CQ4 756 aaKnown RBP24.83■■□□□ 1.57
INA-201ENST00000369849 YTHDC1Q96MU7 727 aaKnown RBP24.81■■□□□ 1.56
INA-201ENST00000369849 BICRAQ9NZM4 1560 aa24.78■■□□□ 1.56
INA-201ENST00000369849 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
INA-201ENST00000369849 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
INA-201ENST00000369849 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
INA-201ENST00000369849 SMARCA2P51531 1590 aa24.7■■□□□ 1.54
INA-201ENST00000369849 APLP2Q06481 763 aa24.65■■□□□ 1.54
INA-201ENST00000369849 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
INA-201ENST00000369849 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
INA-201ENST00000369849 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
INA-201ENST00000369849 ACIN1Q9UKV3 1341 aaKnown RBP24.58■■□□□ 1.52
INA-201ENST00000369849 GTF3C3Q9Y5Q9 886 aa24.57■■□□□ 1.52
INA-201ENST00000369849 ITGAEP38570 1179 aa24.46■■□□□ 1.51
INA-201ENST00000369849 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
INA-201ENST00000369849 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
INA-201ENST00000369849 CENPBP07199 599 aaPredicted RBP24.43■■□□□ 1.5
INA-201ENST00000369849 CLIP1P30622 1438 aa24.41■■□□□ 1.5
INA-201ENST00000369849 MIER1Q8N108 512 aa24.35■■□□□ 1.49
INA-201ENST00000369849 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
INA-201ENST00000369849 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
INA-201ENST00000369849 EEA1Q15075 1411 aa24.31■■□□□ 1.48
INA-201ENST00000369849 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
INA-201ENST00000369849 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
INA-201ENST00000369849 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
INA-201ENST00000369849 ATP1B4Q9UN42 357 aaPredicted RBP24.23■■□□□ 1.47
INA-201ENST00000369849 KANK4Q5T7N3 995 aaPredicted RBP24.22■■□□□ 1.47
INA-201ENST00000369849 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
INA-201ENST00000369849 P3H3Q8IVL6 736 aa24.11■■□□□ 1.45
INA-201ENST00000369849 PELP1Q8IZL8 1130 aaKnown RBP24.07■■□□□ 1.44
INA-201ENST00000369849 PEG3Q9GZU2 1588 aa24.05■■□□□ 1.44
INA-201ENST00000369849 KIF21BO75037 1637 aa23.96■■□□□ 1.43
INA-201ENST00000369849 FAM50AQ14320 339 aaKnown RBP23.89■■□□□ 1.42
INA-201ENST00000369849 HIRIP3Q9BW71 556 aaPredicted RBP23.84■■□□□ 1.41
INA-201ENST00000369849 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
INA-201ENST00000369849 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
INA-201ENST00000369849 NCAPD3P42695 1498 aa23.78■■□□□ 1.4
INA-201ENST00000369849 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
INA-201ENST00000369849 KCNH8Q96L42 1107 aa23.75■■□□□ 1.39
INA-201ENST00000369849 TOP2BQ02880 1626 aa23.74■■□□□ 1.39
INA-201ENST00000369849 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
INA-201ENST00000369849 CUX1P39880 1505 aa23.74■■□□□ 1.39
INA-201ENST00000369849 PRXQ9BXM0 1461 aa23.7■■□□□ 1.38
INA-201ENST00000369849 CUX2O14529 1486 aa23.69■■□□□ 1.38
INA-201ENST00000369849 CCNB3Q8WWL7 1395 aa23.66■■□□□ 1.38
INA-201ENST00000369849 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
INA-201ENST00000369849 BCANQ96GW7 911 aa23.63■■□□□ 1.37
INA-201ENST00000369849 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
INA-201ENST00000369849 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
INA-201ENST00000369849 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
INA-201ENST00000369849 ARHGAP35Q9NRY4 1499 aa23.59■■□□□ 1.37
INA-201ENST00000369849 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
INA-201ENST00000369849 IGF1RP08069 1367 aa23.57■■□□□ 1.36
INA-201ENST00000369849 RAB3GAP2Q9H2M9 1393 aa23.57■■□□□ 1.36
INA-201ENST00000369849 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
INA-201ENST00000369849 CFTRP13569 1480 aa23.48■■□□□ 1.35
INA-201ENST00000369849 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
INA-201ENST00000369849 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms