RNA–Protein interactions for RNA: ENST00000368621.5

SLC39A1-203, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,398 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-203ENST00000368621 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
SLC39A1-203ENST00000368621 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
SLC39A1-203ENST00000368621 ZCCHC6Q5VYS8 1495 aaKnown RBP29.82■■■□□ 2.36
SLC39A1-203ENST00000368621 DCAF1Q9Y4B6 1507 aa29.29■■■□□ 2.28
SLC39A1-203ENST00000368621 SHROOM4Q9ULL8 1493 aa29.2■■■□□ 2.27
SLC39A1-203ENST00000368621 DCAF8L2P0C7V8 631 aa29.19■■■□□ 2.26
SLC39A1-203ENST00000368621 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
SLC39A1-203ENST00000368621 ABCC9O60706 1549 aa28.64■■■□□ 2.18
SLC39A1-203ENST00000368621 NACADO15069 1562 aa28.5■■■□□ 2.15
SLC39A1-203ENST00000368621 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
SLC39A1-203ENST00000368621 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
SLC39A1-203ENST00000368621 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
SLC39A1-203ENST00000368621 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
SLC39A1-203ENST00000368621 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
SLC39A1-203ENST00000368621 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
SLC39A1-203ENST00000368621 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
SLC39A1-203ENST00000368621 BAZ1AQ9NRL2 1556 aaPredicted RBP27.34■■□□□ 1.97
SLC39A1-203ENST00000368621 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
SLC39A1-203ENST00000368621 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
SLC39A1-203ENST00000368621 WIZO95785 1651 aa27.16■■□□□ 1.94
SLC39A1-203ENST00000368621 SMARCA4P51532 1647 aa27.13■■□□□ 1.93
SLC39A1-203ENST00000368621 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
SLC39A1-203ENST00000368621 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
SLC39A1-203ENST00000368621 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
SLC39A1-203ENST00000368621 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
SLC39A1-203ENST00000368621 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
SLC39A1-203ENST00000368621 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.85
SLC39A1-203ENST00000368621 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
SLC39A1-203ENST00000368621 EIF4G1Q04637 1599 aaKnown RBP26.57■■□□□ 1.84
SLC39A1-203ENST00000368621 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
SLC39A1-203ENST00000368621 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
SLC39A1-203ENST00000368621 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
SLC39A1-203ENST00000368621 LOC105371045A0A1W2PR82 267 aa26.28■■□□□ 1.8
SLC39A1-203ENST00000368621 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
SLC39A1-203ENST00000368621 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.77
SLC39A1-203ENST00000368621 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
SLC39A1-203ENST00000368621 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
SLC39A1-203ENST00000368621 EEA1Q15075 1411 aa25.91■■□□□ 1.74
SLC39A1-203ENST00000368621 SYNJ1O43426 1573 aa25.86■■□□□ 1.73
SLC39A1-203ENST00000368621 CFTRP13569 1480 aa25.82■■□□□ 1.72
SLC39A1-203ENST00000368621 SOGA1O94964 1423 aa25.81■■□□□ 1.72
SLC39A1-203ENST00000368621 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
SLC39A1-203ENST00000368621 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
SLC39A1-203ENST00000368621 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
SLC39A1-203ENST00000368621 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
SLC39A1-203ENST00000368621 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
SLC39A1-203ENST00000368621 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
SLC39A1-203ENST00000368621 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
SLC39A1-203ENST00000368621 PCGF6Q9BYE7 350 aa25.58■■□□□ 1.69
SLC39A1-203ENST00000368621 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
SLC39A1-203ENST00000368621 CUX1P39880 1505 aa25.55■■□□□ 1.68
SLC39A1-203ENST00000368621 TNIKQ9UKE5 1360 aa25.55■■□□□ 1.68
SLC39A1-203ENST00000368621 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
SLC39A1-203ENST00000368621 KIF21BO75037 1637 aa25.51■■□□□ 1.67
SLC39A1-203ENST00000368621 TRIM26Q12899 539 aaPredicted RBP25.5■■□□□ 1.67
SLC39A1-203ENST00000368621 UBTFP17480 764 aaKnown RBP25.46■■□□□ 1.67
SLC39A1-203ENST00000368621 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
SLC39A1-203ENST00000368621 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
SLC39A1-203ENST00000368621 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
SLC39A1-203ENST00000368621 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
SLC39A1-203ENST00000368621 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
SLC39A1-203ENST00000368621 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
SLC39A1-203ENST00000368621 NESP48681 1621 aa25.25■■□□□ 1.63
SLC39A1-203ENST00000368621 PRXQ9BXM0 1461 aa25.24■■□□□ 1.63
SLC39A1-203ENST00000368621 FGD5Q6ZNL6 1462 aa25.23■■□□□ 1.63
SLC39A1-203ENST00000368621 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
SLC39A1-203ENST00000368621 HRCP23327 699 aa25.18■■□□□ 1.62
SLC39A1-203ENST00000368621 CUX2O14529 1486 aa25.17■■□□□ 1.62
SLC39A1-203ENST00000368621 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
SLC39A1-203ENST00000368621 CLIP1P30622 1438 aa25.16■■□□□ 1.62
SLC39A1-203ENST00000368621 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
SLC39A1-203ENST00000368621 DNAJC5BQ9UF47 199 aa25.06■■□□□ 1.6
SLC39A1-203ENST00000368621 POLA1P09884 1462 aaPredicted RBP25.04■■□□□ 1.6
SLC39A1-203ENST00000368621 IGF1RP08069 1367 aa25.04■■□□□ 1.6
SLC39A1-203ENST00000368621 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
SLC39A1-203ENST00000368621 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
SLC39A1-203ENST00000368621 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
SLC39A1-203ENST00000368621 VPS8Q8N3P4 1428 aa25■■□□□ 1.59
SLC39A1-203ENST00000368621 KIF21AQ7Z4S6 1674 aa24.96■■□□□ 1.59
SLC39A1-203ENST00000368621 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
SLC39A1-203ENST00000368621 CARMIL1Q5VZK9 1371 aa24.95■■□□□ 1.58
SLC39A1-203ENST00000368621 RANGAP1P46060 587 aaPredicted RBP24.89■■□□□ 1.57
SLC39A1-203ENST00000368621 WDR97A6NE52 1622 aa24.87■■□□□ 1.57
SLC39A1-203ENST00000368621 APLP2Q06481 763 aa24.86■■□□□ 1.57
SLC39A1-203ENST00000368621 CUL7Q14999 1698 aa24.84■■□□□ 1.57
SLC39A1-203ENST00000368621 ARAP1Q96P48 1450 aa24.81■■□□□ 1.56
SLC39A1-203ENST00000368621 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
SLC39A1-203ENST00000368621 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
SLC39A1-203ENST00000368621 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
SLC39A1-203ENST00000368621 ZEB1P37275 1124 aaPredicted RBP24.76■■□□□ 1.55
SLC39A1-203ENST00000368621 ARHGAP35Q9NRY4 1499 aa24.74■■□□□ 1.55
SLC39A1-203ENST00000368621 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
SLC39A1-203ENST00000368621 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
SLC39A1-203ENST00000368621 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.54
SLC39A1-203ENST00000368621 WDR62O43379 1518 aa24.62■■□□□ 1.53
SLC39A1-203ENST00000368621 CTTNBP2Q8WZ74 1663 aa24.61■■□□□ 1.53
SLC39A1-203ENST00000368621 EFCAB5A4FU69 1503 aa24.57■■□□□ 1.52
SLC39A1-203ENST00000368621 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
SLC39A1-203ENST00000368621 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
SLC39A1-203ENST00000368621 FHAD1B1AJZ9 1412 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms