RNA–Protein interactions for RNA: ENST00000368571.2

KNDC1-202, Transcript of kinase non-catalytic C-lobe domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene KNDC1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNDC1-202ENST00000368571 NISCHQ9Y2I1 1504 aa23.5■■□□□ 1.35
KNDC1-202ENST00000368571 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
KNDC1-202ENST00000368571 SHROOM4Q9ULL8 1493 aa21.65■■□□□ 1.06
KNDC1-202ENST00000368571 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
KNDC1-202ENST00000368571 HRCP23327 699 aa21.25■□□□□ 0.99
KNDC1-202ENST00000368571 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.98
KNDC1-202ENST00000368571 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
KNDC1-202ENST00000368571 PPARGC1BQ86YN6 1023 aaKnown RBP20.93■□□□□ 0.94
KNDC1-202ENST00000368571 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
KNDC1-202ENST00000368571 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
KNDC1-202ENST00000368571 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
KNDC1-202ENST00000368571 MYT1Q01538 1121 aa20.42■□□□□ 0.86
KNDC1-202ENST00000368571 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
KNDC1-202ENST00000368571 ZEB1P37275 1124 aaPredicted RBP20.41■□□□□ 0.86
KNDC1-202ENST00000368571 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
KNDC1-202ENST00000368571 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
KNDC1-202ENST00000368571 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
KNDC1-202ENST00000368571 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
KNDC1-202ENST00000368571 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
KNDC1-202ENST00000368571 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
KNDC1-202ENST00000368571 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
KNDC1-202ENST00000368571 TTBK1Q5TCY1 1321 aaPredicted RBP19.85■□□□□ 0.77
KNDC1-202ENST00000368571 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
KNDC1-202ENST00000368571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
KNDC1-202ENST00000368571 GTF3C3Q9Y5Q9 886 aa19.72■□□□□ 0.75
KNDC1-202ENST00000368571 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
KNDC1-202ENST00000368571 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
KNDC1-202ENST00000368571 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
KNDC1-202ENST00000368571 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
KNDC1-202ENST00000368571 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
KNDC1-202ENST00000368571 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
KNDC1-202ENST00000368571 ZNF316A6NFI3 1004 aaPredicted RBP19.23■□□□□ 0.67
KNDC1-202ENST00000368571 APLP2Q06481 763 aa19.23■□□□□ 0.67
KNDC1-202ENST00000368571 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
KNDC1-202ENST00000368571 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
KNDC1-202ENST00000368571 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
KNDC1-202ENST00000368571 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
KNDC1-202ENST00000368571 MIER1Q8N108 512 aa19■□□□□ 0.63
KNDC1-202ENST00000368571 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
KNDC1-202ENST00000368571 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.59
KNDC1-202ENST00000368571 NEFLP07196 543 aa18.76■□□□□ 0.59
KNDC1-202ENST00000368571 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
KNDC1-202ENST00000368571 BCANQ96GW7 911 aa18.75■□□□□ 0.59
KNDC1-202ENST00000368571 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
KNDC1-202ENST00000368571 ABCC9O60706 1549 aa18.7■□□□□ 0.58
KNDC1-202ENST00000368571 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
KNDC1-202ENST00000368571 ITGAEP38570 1179 aa18.67■□□□□ 0.58
KNDC1-202ENST00000368571 CEP162Q5TB80 1403 aa18.66■□□□□ 0.58
KNDC1-202ENST00000368571 CLSPNQ9HAW4 1339 aa18.62■□□□□ 0.57
KNDC1-202ENST00000368571 SUPT16HQ9Y5B9 1047 aaKnown RBP18.58■□□□□ 0.57
KNDC1-202ENST00000368571 ANP32EQ9BTT0 268 aa18.55■□□□□ 0.56
KNDC1-202ENST00000368571 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
KNDC1-202ENST00000368571 TNIKQ9UKE5 1360 aa18.51■□□□□ 0.55
KNDC1-202ENST00000368571 FKBP8Q14318 412 aa18.5■□□□□ 0.55
KNDC1-202ENST00000368571 SOGA1O94964 1423 aa18.41■□□□□ 0.54
KNDC1-202ENST00000368571 TSHZ2Q9NRE2 1034 aa18.41■□□□□ 0.54
KNDC1-202ENST00000368571 ATP1B4Q9UN42 357 aaPredicted RBP18.4■□□□□ 0.54
KNDC1-202ENST00000368571 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
KNDC1-202ENST00000368571 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
KNDC1-202ENST00000368571 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
KNDC1-202ENST00000368571 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
KNDC1-202ENST00000368571 CLIP1P30622 1438 aa18.34■□□□□ 0.53
KNDC1-202ENST00000368571 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
KNDC1-202ENST00000368571 EEA1Q15075 1411 aa18.3■□□□□ 0.52
KNDC1-202ENST00000368571 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
KNDC1-202ENST00000368571 TRIM52Q96A61 297 aa18.28■□□□□ 0.52
KNDC1-202ENST00000368571 ANP32CO43423 234 aa18.27■□□□□ 0.52
KNDC1-202ENST00000368571 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
KNDC1-202ENST00000368571 WIZO95785 1651 aa18.22■□□□□ 0.51
KNDC1-202ENST00000368571 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
KNDC1-202ENST00000368571 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
KNDC1-202ENST00000368571 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
KNDC1-202ENST00000368571 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
KNDC1-202ENST00000368571 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
KNDC1-202ENST00000368571 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
KNDC1-202ENST00000368571 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
KNDC1-202ENST00000368571 CNGB1Q14028 1251 aaPredicted RBP18.09■□□□□ 0.49
KNDC1-202ENST00000368571 VPS8Q8N3P4 1428 aa18.09■□□□□ 0.49
KNDC1-202ENST00000368571 IRX6P78412 446 aaPredicted RBP18.08■□□□□ 0.48
KNDC1-202ENST00000368571 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
KNDC1-202ENST00000368571 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
KNDC1-202ENST00000368571 DHX57Q6P158 1386 aaKnown RBP18.05■□□□□ 0.48
KNDC1-202ENST00000368571 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
KNDC1-202ENST00000368571 NACADO15069 1562 aa18■□□□□ 0.47
KNDC1-202ENST00000368571 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
KNDC1-202ENST00000368571 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
KNDC1-202ENST00000368571 ANO8Q9HCE9 1232 aaPredicted RBP17.92■□□□□ 0.46
KNDC1-202ENST00000368571 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
KNDC1-202ENST00000368571 CCNB3Q8WWL7 1395 aa17.89■□□□□ 0.45
KNDC1-202ENST00000368571 NBR1Q14596 966 aa17.89■□□□□ 0.45
KNDC1-202ENST00000368571 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
KNDC1-202ENST00000368571 POLR3GLQ9BT43 218 aa17.88■□□□□ 0.45
KNDC1-202ENST00000368571 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
KNDC1-202ENST00000368571 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
KNDC1-202ENST00000368571 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
KNDC1-202ENST00000368571 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
KNDC1-202ENST00000368571 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
KNDC1-202ENST00000368571 FAM9BQ8IZU0 186 aa17.83■□□□□ 0.44
KNDC1-202ENST00000368571 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
KNDC1-202ENST00000368571 ANP32AP39687 249 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms