RNA–Protein interactions for RNA: ENST00000368347.8

RUSC1-202, Transcript of RUN and SH3 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUSC1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUSC1-202ENST00000368347 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
RUSC1-202ENST00000368347 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
RUSC1-202ENST00000368347 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
RUSC1-202ENST00000368347 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.01
RUSC1-202ENST00000368347 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
RUSC1-202ENST00000368347 ABCC9O60706 1549 aa27.45■■□□□ 1.98
RUSC1-202ENST00000368347 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
RUSC1-202ENST00000368347 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
RUSC1-202ENST00000368347 SCRIBQ14160 1630 aa26.6■■□□□ 1.85
RUSC1-202ENST00000368347 NACADO15069 1562 aa26.48■■□□□ 1.83
RUSC1-202ENST00000368347 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.82
RUSC1-202ENST00000368347 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
RUSC1-202ENST00000368347 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
RUSC1-202ENST00000368347 CECR2Q9BXF3 1484 aa25.91■■□□□ 1.74
RUSC1-202ENST00000368347 UNC13AQ9UPW8 1703 aa25.91■■□□□ 1.74
RUSC1-202ENST00000368347 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
RUSC1-202ENST00000368347 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.7
RUSC1-202ENST00000368347 MROH2BQ7Z745 1585 aa25.64■■□□□ 1.69
RUSC1-202ENST00000368347 WIZO95785 1651 aa25.43■■□□□ 1.66
RUSC1-202ENST00000368347 PELP1Q8IZL8 1130 aaKnown RBP25.37■■□□□ 1.65
RUSC1-202ENST00000368347 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
RUSC1-202ENST00000368347 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
RUSC1-202ENST00000368347 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
RUSC1-202ENST00000368347 MYT1Q01538 1121 aa25.25■■□□□ 1.63
RUSC1-202ENST00000368347 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
RUSC1-202ENST00000368347 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
RUSC1-202ENST00000368347 CCDC88BA6NC98 1476 aa24.9■■□□□ 1.58
RUSC1-202ENST00000368347 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
RUSC1-202ENST00000368347 BAZ1BQ9UIG0 1483 aaKnown RBP24.8■■□□□ 1.56
RUSC1-202ENST00000368347 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
RUSC1-202ENST00000368347 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
RUSC1-202ENST00000368347 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
RUSC1-202ENST00000368347 FAM9AQ8IZU1 332 aaPredicted RBP24.69■■□□□ 1.54
RUSC1-202ENST00000368347 HRCP23327 699 aa24.68■■□□□ 1.54
RUSC1-202ENST00000368347 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.53
RUSC1-202ENST00000368347 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.53
RUSC1-202ENST00000368347 LOC105371045A0A1W2PR82 267 aa24.63■■□□□ 1.53
RUSC1-202ENST00000368347 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
RUSC1-202ENST00000368347 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
RUSC1-202ENST00000368347 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
RUSC1-202ENST00000368347 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
RUSC1-202ENST00000368347 HMGXB3Q12766 1538 aa24.41■■□□□ 1.5
RUSC1-202ENST00000368347 PCGF6Q9BYE7 350 aa24.37■■□□□ 1.49
RUSC1-202ENST00000368347 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
RUSC1-202ENST00000368347 SLC24A1O60721 1099 aa24.19■■□□□ 1.46
RUSC1-202ENST00000368347 SOGA1O94964 1423 aa24.15■■□□□ 1.46
RUSC1-202ENST00000368347 NESP48681 1621 aa24.14■■□□□ 1.46
RUSC1-202ENST00000368347 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
RUSC1-202ENST00000368347 CFTRP13569 1480 aa24.12■■□□□ 1.45
RUSC1-202ENST00000368347 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
RUSC1-202ENST00000368347 SYNJ1O43426 1573 aa24.1■■□□□ 1.45
RUSC1-202ENST00000368347 PPARGC1BQ86YN6 1023 aaKnown RBP24.06■■□□□ 1.44
RUSC1-202ENST00000368347 CUX1P39880 1505 aa23.9■■□□□ 1.42
RUSC1-202ENST00000368347 CSRNP3Q8WYN3 585 aa23.88■■□□□ 1.41
RUSC1-202ENST00000368347 FANCD2Q9BXW9 1451 aa23.86■■□□□ 1.41
RUSC1-202ENST00000368347 TRIM26Q12899 539 aaPredicted RBP23.82■■□□□ 1.4
RUSC1-202ENST00000368347 PRKCSHP14314 528 aaPredicted RBP23.82■■□□□ 1.4
RUSC1-202ENST00000368347 TOP2BQ02880 1626 aa23.8■■□□□ 1.4
RUSC1-202ENST00000368347 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
RUSC1-202ENST00000368347 RANGAP1P46060 587 aaPredicted RBP23.78■■□□□ 1.4
RUSC1-202ENST00000368347 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
RUSC1-202ENST00000368347 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
RUSC1-202ENST00000368347 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
RUSC1-202ENST00000368347 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.37
RUSC1-202ENST00000368347 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
RUSC1-202ENST00000368347 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
RUSC1-202ENST00000368347 PDS5BQ9NTI5 1447 aa23.6■■□□□ 1.37
RUSC1-202ENST00000368347 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
RUSC1-202ENST00000368347 TOPBP1Q92547 1522 aa23.57■■□□□ 1.36
RUSC1-202ENST00000368347 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
RUSC1-202ENST00000368347 CUX2O14529 1486 aa23.57■■□□□ 1.36
RUSC1-202ENST00000368347 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
RUSC1-202ENST00000368347 EEA1Q15075 1411 aa23.56■■□□□ 1.36
RUSC1-202ENST00000368347 APLP2Q06481 763 aa23.55■■□□□ 1.36
RUSC1-202ENST00000368347 ERICH6Q7L0X2 663 aa23.53■■□□□ 1.36
RUSC1-202ENST00000368347 ZEB1P37275 1124 aaPredicted RBP23.52■■□□□ 1.36
RUSC1-202ENST00000368347 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
RUSC1-202ENST00000368347 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
RUSC1-202ENST00000368347 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
RUSC1-202ENST00000368347 DNMBPQ6XZF7 1577 aa23.46■■□□□ 1.35
RUSC1-202ENST00000368347 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
RUSC1-202ENST00000368347 IGF1RP08069 1367 aa23.44■■□□□ 1.34
RUSC1-202ENST00000368347 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
RUSC1-202ENST00000368347 TNIKQ9UKE5 1360 aa23.43■■□□□ 1.34
RUSC1-202ENST00000368347 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
RUSC1-202ENST00000368347 PRXQ9BXM0 1461 aa23.35■■□□□ 1.33
RUSC1-202ENST00000368347 KIF21BO75037 1637 aa23.31■■□□□ 1.32
RUSC1-202ENST00000368347 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
RUSC1-202ENST00000368347 MRC2Q9UBG0 1479 aa23.27■■□□□ 1.32
RUSC1-202ENST00000368347 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
RUSC1-202ENST00000368347 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.328e-10■■■■■ 51.9
RUSC1-202ENST00000368347 CLIP1P30622 1438 aa23.23■■□□□ 1.31
RUSC1-202ENST00000368347 P3H3Q8IVL6 736 aa23.2■■□□□ 1.3
RUSC1-202ENST00000368347 ZNF608Q9ULD9 1512 aaPredicted RBP23.19■■□□□ 1.3
RUSC1-202ENST00000368347 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
RUSC1-202ENST00000368347 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
RUSC1-202ENST00000368347 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
RUSC1-202ENST00000368347 WDR62O43379 1518 aa23.08■■□□□ 1.29
RUSC1-202ENST00000368347 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
RUSC1-202ENST00000368347 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms