RNA–Protein interactions for RNA: ENST00000367005.8

RCOR3-201, Transcript of REST corepressor 3, humanhuman

TSL 1 (best) BASIC

Gene RCOR3, Length 4,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-201ENST00000367005 NISCHQ9Y2I1 1504 aa11.54□□□□□ -0.56
RCOR3-201ENST00000367005 DCAF8L2P0C7V8 631 aa10.13□□□□□ -0.79
RCOR3-201ENST00000367005 CCDC180Q9P1Z9 1646 aa9.98□□□□□ -0.81
RCOR3-201ENST00000367005 ABCC9O60706 1549 aa9.84□□□□□ -0.83
RCOR3-201ENST00000367005 SHROOM4Q9ULL8 1493 aa9.67□□□□□ -0.86
RCOR3-201ENST00000367005 ZCCHC6Q5VYS8 1495 aaKnown RBP9.62□□□□□ -0.87
RCOR3-201ENST00000367005 NACADO15069 1562 aa9.45□□□□□ -0.9
RCOR3-201ENST00000367005 RB1CC1Q8TDY2 1594 aa9.44□□□□□ -0.9
RCOR3-201ENST00000367005 DCAF1Q9Y4B6 1507 aa9.43□□□□□ -0.9
RCOR3-201ENST00000367005 PABPN1Q86U42 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
RCOR3-201ENST00000367005 SUPT5HO00267 1087 aaKnown RBP9.36□□□□□ -0.91
RCOR3-201ENST00000367005 SCRIBQ14160 1630 aa9.35□□□□□ -0.91
RCOR3-201ENST00000367005 MYO15BQ96JP2 1530 aa9.35□□□□□ -0.91
RCOR3-201ENST00000367005 CECR2Q9BXF3 1484 aa9□□□□□ -0.97
RCOR3-201ENST00000367005 BICRAQ9NZM4 1560 aa8.96□□□□□ -0.97
RCOR3-201ENST00000367005 RSF1Q96T23 1441 aaPredicted RBP8.96□□□□□ -0.98
RCOR3-201ENST00000367005 BAZ1AQ9NRL2 1556 aaPredicted RBP8.96□□□□□ -0.98
RCOR3-201ENST00000367005 UNC13AQ9UPW8 1703 aa8.94□□□□□ -0.98
RCOR3-201ENST00000367005 MROH2BQ7Z745 1585 aa8.91□□□□□ -0.98
RCOR3-201ENST00000367005 BAZ1BQ9UIG0 1483 aaKnown RBP8.85□□□□□ -0.99
RCOR3-201ENST00000367005 SMARCA4P51532 1647 aa8.85□□□□□ -0.99
RCOR3-201ENST00000367005 EIF4G1Q04637 1599 aaKnown RBP8.83□□□□□ -1
RCOR3-201ENST00000367005 SMARCA2P51531 1590 aa8.83□□□□□ -1
RCOR3-201ENST00000367005 ATAD2BQ9ULI0 1458 aa8.81□□□□□ -1
RCOR3-201ENST00000367005 WIZO95785 1651 aa8.8□□□□□ -1
RCOR3-201ENST00000367005 TRIM41Q8WV44 630 aa8.78□□□□□ -1
RCOR3-201ENST00000367005 CC2D2AQ9P2K1 1620 aa8.74□□□□□ -1.01
RCOR3-201ENST00000367005 NCAPD3P42695 1498 aa8.74□□□□□ -1.01
RCOR3-201ENST00000367005 TOP2AP11388 1531 aaKnown RBP8.73□□□□□ -1.01
RCOR3-201ENST00000367005 DNAJC5BQ9UF47 199 aa8.71□□□□□ -1.01
RCOR3-201ENST00000367005 CHIC1Q5VXU3 224 aa8.7□□□□□ -1.02
RCOR3-201ENST00000367005 FAM9AQ8IZU1 332 aaPredicted RBP8.7□□□□□ -1.02
RCOR3-201ENST00000367005 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
RCOR3-201ENST00000367005 EHMT2Q96KQ7 1210 aa8.66□□□□□ -1.02
RCOR3-201ENST00000367005 HMGXB3Q12766 1538 aa8.65□□□□□ -1.02
RCOR3-201ENST00000367005 PEG3Q9GZU2 1588 aa8.64□□□□□ -1.03
RCOR3-201ENST00000367005 CADPSQ9ULU8 1353 aa8.61□□□□□ -1.03
RCOR3-201ENST00000367005 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
RCOR3-201ENST00000367005 PDS5BQ9NTI5 1447 aa8.56□□□□□ -1.04
RCOR3-201ENST00000367005 WRNQ14191 1432 aaPredicted RBP eCLIP8.54□□□□□ -1.04
RCOR3-201ENST00000367005 CFTRP13569 1480 aa8.51□□□□□ -1.05
RCOR3-201ENST00000367005 UBTFP17480 764 aaKnown RBP8.51□□□□□ -1.05
RCOR3-201ENST00000367005 NESP48681 1621 aa8.51□□□□□ -1.05
RCOR3-201ENST00000367005 FANCD2Q9BXW9 1451 aa8.5□□□□□ -1.05
RCOR3-201ENST00000367005 CEP164Q9UPV0 1460 aa8.48□□□□□ -1.05
RCOR3-201ENST00000367005 ABCC8Q09428 1581 aa8.48□□□□□ -1.05
RCOR3-201ENST00000367005 RANGAP1P46060 587 aaPredicted RBP8.47□□□□□ -1.05
RCOR3-201ENST00000367005 CSRNP3Q8WYN3 585 aa8.44□□□□□ -1.06
RCOR3-201ENST00000367005 LOC105371045A0A1W2PR82 267 aa8.44□□□□□ -1.06
RCOR3-201ENST00000367005 LAMC3Q9Y6N6 1575 aa8.44□□□□□ -1.06
RCOR3-201ENST00000367005 FBLN2P98095 1184 aa8.42□□□□□ -1.06
RCOR3-201ENST00000367005 SOGA1O94964 1423 aa8.39□□□□□ -1.07
RCOR3-201ENST00000367005 KIF27Q86VH2 1401 aa8.38□□□□□ -1.07
RCOR3-201ENST00000367005 CUX2O14529 1486 aa8.37□□□□□ -1.07
RCOR3-201ENST00000367005 MRC2Q9UBG0 1479 aa8.37□□□□□ -1.07
RCOR3-201ENST00000367005 EEA1Q15075 1411 aa8.36□□□□□ -1.07
RCOR3-201ENST00000367005 TDRD9Q8NDG6 1382 aaKnown RBP8.35□□□□□ -1.07
RCOR3-201ENST00000367005 FGD5Q6ZNL6 1462 aa8.35□□□□□ -1.07
RCOR3-201ENST00000367005 APLP2Q06481 763 aa8.35□□□□□ -1.07
RCOR3-201ENST00000367005 TOPBP1Q92547 1522 aa8.34□□□□□ -1.07
RCOR3-201ENST00000367005 CHMP7Q8WUX9 453 aaPredicted RBP8.33□□□□□ -1.08
RCOR3-201ENST00000367005 CUX1P39880 1505 aa8.33□□□□□ -1.08
RCOR3-201ENST00000367005 ATP1B4Q9UN42 357 aaPredicted RBP8.33□□□□□ -1.08
RCOR3-201ENST00000367005 SYNJ1O43426 1573 aa8.33□□□□□ -1.08
RCOR3-201ENST00000367005 RAD54L2Q9Y4B4 1467 aa8.32□□□□□ -1.08
RCOR3-201ENST00000367005 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
RCOR3-201ENST00000367005 DNMBPQ6XZF7 1577 aa8.31□□□□□ -1.08
RCOR3-201ENST00000367005 TOP2BQ02880 1626 aa8.3□□□□□ -1.08
RCOR3-201ENST00000367005 URB2Q14146 1524 aaKnown RBP8.3□□□□□ -1.08
RCOR3-201ENST00000367005 POLA1P09884 1462 aaPredicted RBP8.29□□□□□ -1.08
RCOR3-201ENST00000367005 CARMIL1Q5VZK9 1371 aa8.28□□□□□ -1.08
RCOR3-201ENST00000367005 RUSC2Q8N2Y8 1516 aa8.27□□□□□ -1.09
RCOR3-201ENST00000367005 KIF21AQ7Z4S6 1674 aa8.26□□□□□ -1.09
RCOR3-201ENST00000367005 IFT140Q96RY7 1462 aa8.26□□□□□ -1.09
RCOR3-201ENST00000367005 AQRO60306 1485 aaKnown RBP eCLIP8.25□□□□□ -1.098e-7■■■□□ 16.1
RCOR3-201ENST00000367005 GOLGA3Q08378 1498 aa8.25□□□□□ -1.09
RCOR3-201ENST00000367005 GAPVD1Q14C86 1478 aa8.25□□□□□ -1.09
RCOR3-201ENST00000367005 P3H3Q8IVL6 736 aa8.25□□□□□ -1.09
RCOR3-201ENST00000367005 PRDM2Q13029 1718 aa8.24□□□□□ -1.09
RCOR3-201ENST00000367005 IGF1RP08069 1367 aa8.23□□□□□ -1.09
RCOR3-201ENST00000367005 BIVM-ERCC5R4GMW8 1640 aa8.22□□□□□ -1.09
RCOR3-201ENST00000367005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.21□□□□□ -1.09
RCOR3-201ENST00000367005 HNRNPUL2Q1KMD3 747 aaKnown RBP8.21□□□□□ -1.09
RCOR3-201ENST00000367005 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.1
RCOR3-201ENST00000367005 GRIN2BQ13224 1484 aa8.2□□□□□ -1.1
RCOR3-201ENST00000367005 RAPGEF2Q9Y4G8 1499 aa8.19□□□□□ -1.1
RCOR3-201ENST00000367005 WDR62O43379 1518 aa8.19□□□□□ -1.1
RCOR3-201ENST00000367005 TNIKQ9UKE5 1360 aa8.19□□□□□ -1.1
RCOR3-201ENST00000367005 PPARGC1BQ86YN6 1023 aaKnown RBP8.19□□□□□ -1.1
RCOR3-201ENST00000367005 CLIP1P30622 1438 aa8.17□□□□□ -1.1
RCOR3-201ENST00000367005 ZNF608Q9ULD9 1512 aaPredicted RBP8.17□□□□□ -1.1
RCOR3-201ENST00000367005 FHAD1B1AJZ9 1412 aa8.15□□□□□ -1.1
RCOR3-201ENST00000367005 CEP162Q5TB80 1403 aa8.15□□□□□ -1.1
RCOR3-201ENST00000367005 SNAPC4Q5SXM2 1469 aa8.14□□□□□ -1.11
RCOR3-201ENST00000367005 ARID3CA6NKF2 412 aa8.13□□□□□ -1.11
RCOR3-201ENST00000367005 THOC2Q8NI27 1593 aaKnown RBP8.12□□□□□ -1.11
RCOR3-201ENST00000367005 PRXQ9BXM0 1461 aa8.12□□□□□ -1.11
RCOR3-201ENST00000367005 OSCARQ8IYS5 282 aa8.12□□□□□ -1.11
RCOR3-201ENST00000367005 ERICH3Q5RHP9 1530 aa8.11□□□□□ -1.11
RCOR3-201ENST00000367005 JPH4Q96JJ6 628 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms