RNA–Protein interactions for RNA: ENST00000366934.3

GPATCH2-201, Transcript of G-patch domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene GPATCH2, Length 3,218 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH2-201ENST00000366934 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
GPATCH2-201ENST00000366934 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
GPATCH2-201ENST00000366934 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
GPATCH2-201ENST00000366934 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
GPATCH2-201ENST00000366934 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
GPATCH2-201ENST00000366934 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
GPATCH2-201ENST00000366934 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
GPATCH2-201ENST00000366934 HRCP23327 699 aa18.14■□□□□ 0.49
GPATCH2-201ENST00000366934 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
GPATCH2-201ENST00000366934 LOC105371045A0A1W2PR82 267 aa18.06■□□□□ 0.48
GPATCH2-201ENST00000366934 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
GPATCH2-201ENST00000366934 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
GPATCH2-201ENST00000366934 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
GPATCH2-201ENST00000366934 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
GPATCH2-201ENST00000366934 TRIM26Q12899 539 aaPredicted RBP17.53■□□□□ 0.4
GPATCH2-201ENST00000366934 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
GPATCH2-201ENST00000366934 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
GPATCH2-201ENST00000366934 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
GPATCH2-201ENST00000366934 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
GPATCH2-201ENST00000366934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
GPATCH2-201ENST00000366934 CCER1Q8TC90 406 aaPredicted RBP17.06■□□□□ 0.32
GPATCH2-201ENST00000366934 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
GPATCH2-201ENST00000366934 SCRIBQ14160 1630 aa17.05■□□□□ 0.32
GPATCH2-201ENST00000366934 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
GPATCH2-201ENST00000366934 RB1CC1Q8TDY2 1594 aa16.88■□□□□ 0.29
GPATCH2-201ENST00000366934 ABCC9O60706 1549 aa16.84■□□□□ 0.29
GPATCH2-201ENST00000366934 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
GPATCH2-201ENST00000366934 RANGAP1P46060 587 aaPredicted RBP16.79■□□□□ 0.28
GPATCH2-201ENST00000366934 NEUROD1Q13562 356 aa16.79■□□□□ 0.28
GPATCH2-201ENST00000366934 YTHDC1Q96MU7 727 aaKnown RBP16.79■□□□□ 0.28
GPATCH2-201ENST00000366934 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
GPATCH2-201ENST00000366934 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
GPATCH2-201ENST00000366934 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
GPATCH2-201ENST00000366934 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
GPATCH2-201ENST00000366934 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
GPATCH2-201ENST00000366934 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
GPATCH2-201ENST00000366934 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
GPATCH2-201ENST00000366934 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
GPATCH2-201ENST00000366934 WIZO95785 1651 aa16.52■□□□□ 0.24
GPATCH2-201ENST00000366934 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
GPATCH2-201ENST00000366934 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
GPATCH2-201ENST00000366934 SOGA1O94964 1423 aa16.46■□□□□ 0.23
GPATCH2-201ENST00000366934 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
GPATCH2-201ENST00000366934 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
GPATCH2-201ENST00000366934 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
GPATCH2-201ENST00000366934 NACADO15069 1562 aa16.42■□□□□ 0.22
GPATCH2-201ENST00000366934 CEP162Q5TB80 1403 aa16.42■□□□□ 0.22
GPATCH2-201ENST00000366934 APLP2Q06481 763 aa16.4■□□□□ 0.22
GPATCH2-201ENST00000366934 MIER1Q8N108 512 aa16.4■□□□□ 0.22
GPATCH2-201ENST00000366934 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
GPATCH2-201ENST00000366934 ITGAEP38570 1179 aa16.26■□□□□ 0.19
GPATCH2-201ENST00000366934 TNIKQ9UKE5 1360 aa16.24■□□□□ 0.19
GPATCH2-201ENST00000366934 BAZ1AQ9NRL2 1556 aaPredicted RBP16.18■□□□□ 0.18
GPATCH2-201ENST00000366934 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
GPATCH2-201ENST00000366934 CLIP1P30622 1438 aa16.1■□□□□ 0.17
GPATCH2-201ENST00000366934 GOLGA3Q08378 1498 aa16.09■□□□□ 0.17
GPATCH2-201ENST00000366934 TOP2AP11388 1531 aaKnown RBP16.07■□□□□ 0.16
GPATCH2-201ENST00000366934 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
GPATCH2-201ENST00000366934 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.16
GPATCH2-201ENST00000366934 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
GPATCH2-201ENST00000366934 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
GPATCH2-201ENST00000366934 BCANQ96GW7 911 aa16■□□□□ 0.15
GPATCH2-201ENST00000366934 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
GPATCH2-201ENST00000366934 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
GPATCH2-201ENST00000366934 EEA1Q15075 1411 aa15.99■□□□□ 0.15
GPATCH2-201ENST00000366934 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
GPATCH2-201ENST00000366934 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
GPATCH2-201ENST00000366934 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
GPATCH2-201ENST00000366934 HIRIP3Q9BW71 556 aaPredicted RBP15.92■□□□□ 0.14
GPATCH2-201ENST00000366934 VPS8Q8N3P4 1428 aa15.9■□□□□ 0.14
GPATCH2-201ENST00000366934 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
GPATCH2-201ENST00000366934 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
GPATCH2-201ENST00000366934 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
GPATCH2-201ENST00000366934 FAM50AQ14320 339 aaKnown RBP15.84■□□□□ 0.13
GPATCH2-201ENST00000366934 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
GPATCH2-201ENST00000366934 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
GPATCH2-201ENST00000366934 MYT1Q01538 1121 aa15.82■□□□□ 0.12
GPATCH2-201ENST00000366934 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
GPATCH2-201ENST00000366934 SIN3AQ96ST3 1273 aa15.79■□□□□ 0.12
GPATCH2-201ENST00000366934 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
GPATCH2-201ENST00000366934 KIF21BO75037 1637 aa15.75■□□□□ 0.11
GPATCH2-201ENST00000366934 FKBP8Q14318 412 aa15.73■□□□□ 0.11
GPATCH2-201ENST00000366934 TRIM52Q96A61 297 aa15.73■□□□□ 0.11
GPATCH2-201ENST00000366934 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
GPATCH2-201ENST00000366934 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
GPATCH2-201ENST00000366934 CCNB3Q8WWL7 1395 aa15.65■□□□□ 0.1
GPATCH2-201ENST00000366934 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
GPATCH2-201ENST00000366934 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
GPATCH2-201ENST00000366934 CLSPNQ9HAW4 1339 aa15.61■□□□□ 0.09
GPATCH2-201ENST00000366934 NEFLP07196 543 aa15.6■□□□□ 0.09
GPATCH2-201ENST00000366934 CNGB1Q14028 1251 aaPredicted RBP15.6■□□□□ 0.09
GPATCH2-201ENST00000366934 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
GPATCH2-201ENST00000366934 KIF27Q86VH2 1401 aa15.55■□□□□ 0.08
GPATCH2-201ENST00000366934 ANP32CO43423 234 aa15.53■□□□□ 0.08
GPATCH2-201ENST00000366934 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
GPATCH2-201ENST00000366934 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
GPATCH2-201ENST00000366934 ANP32EQ9BTT0 268 aa15.47■□□□□ 0.07
GPATCH2-201ENST00000366934 ARHGAP35Q9NRY4 1499 aa15.46■□□□□ 0.07
GPATCH2-201ENST00000366934 RRBP1Q9P2E9 1410 aaKnown RBP15.46■□□□□ 0.07
GPATCH2-201ENST00000366934 CUX2O14529 1486 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms