RNA–Protein interactions for RNA: ENST00000366771.5

ERMARD-201, Transcript of ER membrane associated RNA degradation, humanhuman

TSL 2

Gene ERMARD, Length 2,206 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERMARD-201ENST00000366771 NISCHQ9Y2I1 1504 aa28.76■■■□□ 2.19
ERMARD-201ENST00000366771 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
ERMARD-201ENST00000366771 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
ERMARD-201ENST00000366771 ZCCHC6Q5VYS8 1495 aaKnown RBP24.28■■□□□ 1.48
ERMARD-201ENST00000366771 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
ERMARD-201ENST00000366771 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
ERMARD-201ENST00000366771 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
ERMARD-201ENST00000366771 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
ERMARD-201ENST00000366771 ABCC9O60706 1549 aa23.02■■□□□ 1.28
ERMARD-201ENST00000366771 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
ERMARD-201ENST00000366771 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
ERMARD-201ENST00000366771 NACADO15069 1562 aa22.75■■□□□ 1.23
ERMARD-201ENST00000366771 RSF1Q96T23 1441 aaPredicted RBP22.67■■□□□ 1.22
ERMARD-201ENST00000366771 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
ERMARD-201ENST00000366771 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
ERMARD-201ENST00000366771 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.17
ERMARD-201ENST00000366771 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
ERMARD-201ENST00000366771 WIZO95785 1651 aa22.27■■□□□ 1.16
ERMARD-201ENST00000366771 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
ERMARD-201ENST00000366771 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.13
ERMARD-201ENST00000366771 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
ERMARD-201ENST00000366771 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
ERMARD-201ENST00000366771 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
ERMARD-201ENST00000366771 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
ERMARD-201ENST00000366771 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
ERMARD-201ENST00000366771 PCGF6Q9BYE7 350 aa21.92■■□□□ 1.1
ERMARD-201ENST00000366771 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
ERMARD-201ENST00000366771 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
ERMARD-201ENST00000366771 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
ERMARD-201ENST00000366771 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
ERMARD-201ENST00000366771 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
ERMARD-201ENST00000366771 HRCP23327 699 aa21.71■■□□□ 1.07
ERMARD-201ENST00000366771 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
ERMARD-201ENST00000366771 PEG3Q9GZU2 1588 aa21.55■■□□□ 1.04
ERMARD-201ENST00000366771 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
ERMARD-201ENST00000366771 ATAD2BQ9ULI0 1458 aa21.47■■□□□ 1.03
ERMARD-201ENST00000366771 PPARGC1BQ86YN6 1023 aaKnown RBP21.41■■□□□ 1.02
ERMARD-201ENST00000366771 SOGA1O94964 1423 aa21.4■■□□□ 1.02
ERMARD-201ENST00000366771 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
ERMARD-201ENST00000366771 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
ERMARD-201ENST00000366771 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
ERMARD-201ENST00000366771 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
ERMARD-201ENST00000366771 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
ERMARD-201ENST00000366771 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
ERMARD-201ENST00000366771 EEA1Q15075 1411 aa21.11■□□□□ 0.97
ERMARD-201ENST00000366771 TNIKQ9UKE5 1360 aa21.08■□□□□ 0.97
ERMARD-201ENST00000366771 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
ERMARD-201ENST00000366771 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
ERMARD-201ENST00000366771 HMGXB3Q12766 1538 aa21.05■□□□□ 0.96
ERMARD-201ENST00000366771 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
ERMARD-201ENST00000366771 TTBK1Q5TCY1 1321 aaPredicted RBP21■□□□□ 0.95
ERMARD-201ENST00000366771 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
ERMARD-201ENST00000366771 KIF21BO75037 1637 aa20.92■□□□□ 0.94
ERMARD-201ENST00000366771 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
ERMARD-201ENST00000366771 BIVM-ERCC5R4GMW8 1640 aa20.9■□□□□ 0.94
ERMARD-201ENST00000366771 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
ERMARD-201ENST00000366771 CUX1P39880 1505 aa20.85■□□□□ 0.93
ERMARD-201ENST00000366771 CFTRP13569 1480 aa20.84■□□□□ 0.93
ERMARD-201ENST00000366771 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.93
ERMARD-201ENST00000366771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
ERMARD-201ENST00000366771 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
ERMARD-201ENST00000366771 CLIP1P30622 1438 aa20.77■□□□□ 0.92
ERMARD-201ENST00000366771 CC2D2AQ9P2K1 1620 aa20.74■□□□□ 0.91
ERMARD-201ENST00000366771 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
ERMARD-201ENST00000366771 PRXQ9BXM0 1461 aa20.68■□□□□ 0.9
ERMARD-201ENST00000366771 CADPSQ9ULU8 1353 aa20.65■□□□□ 0.9
ERMARD-201ENST00000366771 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.89
ERMARD-201ENST00000366771 CCER1Q8TC90 406 aaPredicted RBP20.64■□□□□ 0.89
ERMARD-201ENST00000366771 ERICH3Q5RHP9 1530 aa20.61■□□□□ 0.89
ERMARD-201ENST00000366771 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
ERMARD-201ENST00000366771 ARAP1Q96P48 1450 aa20.53■□□□□ 0.88
ERMARD-201ENST00000366771 CUX2O14529 1486 aa20.51■□□□□ 0.87
ERMARD-201ENST00000366771 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
ERMARD-201ENST00000366771 NESP48681 1621 aa20.48■□□□□ 0.87
ERMARD-201ENST00000366771 IGF1RP08069 1367 aa20.46■□□□□ 0.87
ERMARD-201ENST00000366771 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
ERMARD-201ENST00000366771 HNRNPUL2Q1KMD3 747 aaKnown RBP20.46■□□□□ 0.87
ERMARD-201ENST00000366771 APLP2Q06481 763 aa20.44■□□□□ 0.86
ERMARD-201ENST00000366771 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
ERMARD-201ENST00000366771 KANK4Q5T7N3 995 aaPredicted RBP20.39■□□□□ 0.85
ERMARD-201ENST00000366771 ARHGAP35Q9NRY4 1499 aa20.39■□□□□ 0.85
ERMARD-201ENST00000366771 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
ERMARD-201ENST00000366771 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
ERMARD-201ENST00000366771 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
ERMARD-201ENST00000366771 DNMBPQ6XZF7 1577 aa20.32■□□□□ 0.84
ERMARD-201ENST00000366771 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
ERMARD-201ENST00000366771 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
ERMARD-201ENST00000366771 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
ERMARD-201ENST00000366771 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
ERMARD-201ENST00000366771 P3H3Q8IVL6 736 aa20.17■□□□□ 0.82
ERMARD-201ENST00000366771 RRBP1Q9P2E9 1410 aaKnown RBP20.13■□□□□ 0.81
ERMARD-201ENST00000366771 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
ERMARD-201ENST00000366771 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
ERMARD-201ENST00000366771 TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
ERMARD-201ENST00000366771 TIAM1Q13009 1591 aa20.09■□□□□ 0.81
ERMARD-201ENST00000366771 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
ERMARD-201ENST00000366771 FHOD3Q2V2M9 1422 aa20.07■□□□□ 0.8
ERMARD-201ENST00000366771 CUL7Q14999 1698 aa20.06■□□□□ 0.8
ERMARD-201ENST00000366771 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
ERMARD-201ENST00000366771 PCF11O94913 1555 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms