RNA–Protein interactions for RNA: ENST00000366548.7

EXO1-202, Transcript of exonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXO1, Length 3,473 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXO1-202ENST00000366548 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
EXO1-202ENST00000366548 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
EXO1-202ENST00000366548 SHROOM4Q9ULL8 1493 aa17.62■□□□□ 0.41
EXO1-202ENST00000366548 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
EXO1-202ENST00000366548 ABCC9O60706 1549 aa16.86■□□□□ 0.29
EXO1-202ENST00000366548 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
EXO1-202ENST00000366548 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
EXO1-202ENST00000366548 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
EXO1-202ENST00000366548 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
EXO1-202ENST00000366548 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
EXO1-202ENST00000366548 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
EXO1-202ENST00000366548 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
EXO1-202ENST00000366548 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
EXO1-202ENST00000366548 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
EXO1-202ENST00000366548 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
EXO1-202ENST00000366548 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.1
EXO1-202ENST00000366548 NACADO15069 1562 aa15.7■□□□□ 0.1
EXO1-202ENST00000366548 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
EXO1-202ENST00000366548 RANGAP1P46060 587 aaPredicted RBP15.7■□□□□ 0.1
EXO1-202ENST00000366548 TTBK1Q5TCY1 1321 aaPredicted RBP15.63■□□□□ 0.09
EXO1-202ENST00000366548 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
EXO1-202ENST00000366548 PPARGC1BQ86YN6 1023 aaKnown RBP15.52■□□□□ 0.08
EXO1-202ENST00000366548 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
EXO1-202ENST00000366548 UBTFP17480 764 aaKnown RBP15.42■□□□□ 0.06
EXO1-202ENST00000366548 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
EXO1-202ENST00000366548 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
EXO1-202ENST00000366548 WIZO95785 1651 aa15.24■□□□□ 0.03
EXO1-202ENST00000366548 BAZ1AQ9NRL2 1556 aaPredicted RBP15.2■□□□□ 0.02
EXO1-202ENST00000366548 ATP1B4Q9UN42 357 aaPredicted RBP15.18■□□□□ 0.02
EXO1-202ENST00000366548 BAZ1BQ9UIG0 1483 aaKnown RBP15.12■□□□□ 0.01
EXO1-202ENST00000366548 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
EXO1-202ENST00000366548 APLP2Q06481 763 aa15.07■□□□□ 0
EXO1-202ENST00000366548 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
EXO1-202ENST00000366548 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
EXO1-202ENST00000366548 BICRAQ9NZM4 1560 aa15.02□□□□□ -0.01
EXO1-202ENST00000366548 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
EXO1-202ENST00000366548 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
EXO1-202ENST00000366548 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
EXO1-202ENST00000366548 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
EXO1-202ENST00000366548 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
EXO1-202ENST00000366548 FBLN2P98095 1184 aa14.9□□□□□ -0.02
EXO1-202ENST00000366548 SOGA1O94964 1423 aa14.89□□□□□ -0.03
EXO1-202ENST00000366548 WRNQ14191 1432 aaPredicted RBP eCLIP14.88□□□□□ -0.03
EXO1-202ENST00000366548 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
EXO1-202ENST00000366548 ITGAEP38570 1179 aa14.85□□□□□ -0.03
EXO1-202ENST00000366548 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
EXO1-202ENST00000366548 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.04
EXO1-202ENST00000366548 ARID3CA6NKF2 412 aa14.82□□□□□ -0.04
EXO1-202ENST00000366548 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
EXO1-202ENST00000366548 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
EXO1-202ENST00000366548 HRCP23327 699 aa14.79□□□□□ -0.04
EXO1-202ENST00000366548 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
EXO1-202ENST00000366548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
EXO1-202ENST00000366548 CCER1Q8TC90 406 aaPredicted RBP14.73□□□□□ -0.05
EXO1-202ENST00000366548 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
EXO1-202ENST00000366548 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
EXO1-202ENST00000366548 NESP48681 1621 aa14.65□□□□□ -0.06
EXO1-202ENST00000366548 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
EXO1-202ENST00000366548 TDRD9Q8NDG6 1382 aaKnown RBP14.61□□□□□ -0.07
EXO1-202ENST00000366548 CUX2O14529 1486 aa14.56□□□□□ -0.08
EXO1-202ENST00000366548 CEP162Q5TB80 1403 aa14.55□□□□□ -0.08
EXO1-202ENST00000366548 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
EXO1-202ENST00000366548 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
EXO1-202ENST00000366548 FAM50AQ14320 339 aaKnown RBP14.52□□□□□ -0.09
EXO1-202ENST00000366548 CLIP1P30622 1438 aa14.5□□□□□ -0.09
EXO1-202ENST00000366548 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
EXO1-202ENST00000366548 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
EXO1-202ENST00000366548 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
EXO1-202ENST00000366548 GOLGA3Q08378 1498 aa14.46□□□□□ -0.09
EXO1-202ENST00000366548 RAPGEF2Q9Y4G8 1499 aa14.45□□□□□ -0.1
EXO1-202ENST00000366548 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
EXO1-202ENST00000366548 CARMIL1Q5VZK9 1371 aa14.45□□□□□ -0.1
EXO1-202ENST00000366548 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
EXO1-202ENST00000366548 CFTRP13569 1480 aa14.44□□□□□ -0.1
EXO1-202ENST00000366548 TNIKQ9UKE5 1360 aa14.44□□□□□ -0.1
EXO1-202ENST00000366548 EEA1Q15075 1411 aa14.42□□□□□ -0.1
EXO1-202ENST00000366548 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
EXO1-202ENST00000366548 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
EXO1-202ENST00000366548 PEG3Q9GZU2 1588 aa14.38□□□□□ -0.11
EXO1-202ENST00000366548 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
EXO1-202ENST00000366548 KANK4Q5T7N3 995 aaPredicted RBP14.35□□□□□ -0.11
EXO1-202ENST00000366548 CUX1P39880 1505 aa14.33□□□□□ -0.11
EXO1-202ENST00000366548 IGF1RP08069 1367 aa14.33□□□□□ -0.11
EXO1-202ENST00000366548 ZNF777Q9ULD5 760 aaPredicted RBP14.31□□□□□ -0.12
EXO1-202ENST00000366548 AQRO60306 1485 aaKnown RBP eCLIP14.3□□□□□ -0.123e-7■■■■■ 50.2
EXO1-202ENST00000366548 MYT1LQ9UL68 1186 aa14.27□□□□□ -0.13
EXO1-202ENST00000366548 CHIC2Q9UKJ5 165 aa14.27□□□□□ -0.13
EXO1-202ENST00000366548 ZEB1P37275 1124 aaPredicted RBP14.25□□□□□ -0.13
EXO1-202ENST00000366548 NEUROD1Q13562 356 aa14.25□□□□□ -0.13
EXO1-202ENST00000366548 PELP1Q8IZL8 1130 aaKnown RBP14.23□□□□□ -0.13
EXO1-202ENST00000366548 POLA1P09884 1462 aaPredicted RBP14.2□□□□□ -0.14
EXO1-202ENST00000366548 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
EXO1-202ENST00000366548 TRIM52Q96A61 297 aa14.19□□□□□ -0.14
EXO1-202ENST00000366548 FHOD3Q2V2M9 1422 aa14.19□□□□□ -0.14
EXO1-202ENST00000366548 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
EXO1-202ENST00000366548 TOP2BQ02880 1626 aa14.17□□□□□ -0.14
EXO1-202ENST00000366548 MTUS2Q5JR59 1369 aa14.16□□□□□ -0.14
EXO1-202ENST00000366548 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
EXO1-202ENST00000366548 VPS8Q8N3P4 1428 aa14.14□□□□□ -0.15
EXO1-202ENST00000366548 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms