RNA–Protein interactions for RNA: ENST00000366365.2

SNHG20-201, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 2

Gene SNHG20, Length 1,028 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-201ENST00000366365 CHIC1Q5VXU3 224 aa31.64■■■□□ 2.66
SNHG20-201ENST00000366365 AEBP2Q6ZN18 517 aaPredicted RBP31.31■■■□□ 2.6
SNHG20-201ENST00000366365 PHF23Q9BUL5 403 aaPredicted RBP27.91■■■□□ 2.06
SNHG20-201ENST00000366365 SENP3Q9H4L4 574 aaPredicted RBP26.44■■□□□ 1.82
SNHG20-201ENST00000366365 PLPPR3Q6T4P5 718 aa26.16■■□□□ 1.78
SNHG20-201ENST00000366365 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
SNHG20-201ENST00000366365 ADRA2BP18089 450 aa24.43■■□□□ 1.5
SNHG20-201ENST00000366365 FOXD1Q16676 465 aa24.4■■□□□ 1.5
SNHG20-201ENST00000366365 PPP6R1Q9UPN7 881 aa24.28■■□□□ 1.48
SNHG20-201ENST00000366365 KCNA4P22459 653 aa23.81■■□□□ 1.4
SNHG20-201ENST00000366365 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
SNHG20-201ENST00000366365 PIAS4Q8N2W9 510 aaPredicted RBP23.25■■□□□ 1.31
SNHG20-201ENST00000366365 PPP4R3CPQ6ZMV5 832 aa23.18■■□□□ 1.3
SNHG20-201ENST00000366365 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
SNHG20-201ENST00000366365 NCBP3Q53F19 620 aaKnown RBP22.9■■□□□ 1.26
SNHG20-201ENST00000366365 SLC4A1APQ9BWU0 796 aaKnown RBP22.88■■□□□ 1.25
SNHG20-201ENST00000366365 ABCC9O60706 1549 aa22.82■■□□□ 1.24
SNHG20-201ENST00000366365 CSRNP3Q8WYN3 585 aa22.67■■□□□ 1.22
SNHG20-201ENST00000366365 NPM3O75607 178 aaKnown RBP22.53■■□□□ 1.2
SNHG20-201ENST00000366365 CNKSR2Q8WXI2 1034 aa22.31■■□□□ 1.16
SNHG20-201ENST00000366365 SCAF1Q9H7N4 1312 aaKnown RBP22.3■■□□□ 1.16
SNHG20-201ENST00000366365 MSH5O43196 834 aa22.1■■□□□ 1.13
SNHG20-201ENST00000366365 ZBTB22O15209 634 aa21.91■■□□□ 1.1
SNHG20-201ENST00000366365 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
SNHG20-201ENST00000366365 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
SNHG20-201ENST00000366365 NACADO15069 1562 aa21.77■■□□□ 1.08
SNHG20-201ENST00000366365 MAPK8IP2Q13387 824 aaPredicted RBP21.74■■□□□ 1.07
SNHG20-201ENST00000366365 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
SNHG20-201ENST00000366365 FOXD4L1Q9NU39 408 aa21.63■■□□□ 1.05
SNHG20-201ENST00000366365 RNF216Q9NWF9 866 aaPredicted RBP21.61■■□□□ 1.05
SNHG20-201ENST00000366365 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
SNHG20-201ENST00000366365 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
SNHG20-201ENST00000366365 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
SNHG20-201ENST00000366365 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
SNHG20-201ENST00000366365 DMRT2Q9Y5R5 561 aa21.27■■□□□ 1
SNHG20-201ENST00000366365 HOXD11P31277 338 aaPredicted RBP21.26■□□□□ 0.99
SNHG20-201ENST00000366365 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
SNHG20-201ENST00000366365 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
SNHG20-201ENST00000366365 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
SNHG20-201ENST00000366365 SLC4A2P04920 1241 aa21.02■□□□□ 0.96
SNHG20-201ENST00000366365 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
SNHG20-201ENST00000366365 ATXN8OSP0DMR3 200 aa20.82■□□□□ 0.92
SNHG20-201ENST00000366365 MYCNP04198 464 aaPredicted RBP20.81■□□□□ 0.92
SNHG20-201ENST00000366365 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
SNHG20-201ENST00000366365 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
SNHG20-201ENST00000366365 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
SNHG20-201ENST00000366365 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
SNHG20-201ENST00000366365 RTN4Q9NQC3 1192 aaKnown RBP20.42■□□□□ 0.86
SNHG20-201ENST00000366365 FKBP8Q14318 412 aa20.41■□□□□ 0.86
SNHG20-201ENST00000366365 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
SNHG20-201ENST00000366365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.832e-7■■□□□ 13.1
SNHG20-201ENST00000366365 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
SNHG20-201ENST00000366365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
SNHG20-201ENST00000366365 HNRNPUL2Q1KMD3 747 aaKnown RBP20.16■□□□□ 0.82
SNHG20-201ENST00000366365 ATF5Q9Y2D1 282 aaPredicted RBP20.14■□□□□ 0.81
SNHG20-201ENST00000366365 SAMD1Q6SPF0 538 aaPredicted RBP20.13■□□□□ 0.81
SNHG20-201ENST00000366365 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
SNHG20-201ENST00000366365 U3KPZ7 1027 aaPredicted RBP20.03■□□□□ 0.8
SNHG20-201ENST00000366365 SMARCA2P51531 1590 aa20.01■□□□□ 0.79
SNHG20-201ENST00000366365 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
SNHG20-201ENST00000366365 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
SNHG20-201ENST00000366365 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
SNHG20-201ENST00000366365 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
SNHG20-201ENST00000366365 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
SNHG20-201ENST00000366365 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
SNHG20-201ENST00000366365 ERCC6Q03468 1493 aa19.8■□□□□ 0.76
SNHG20-201ENST00000366365 CUX2O14529 1486 aa19.76■□□□□ 0.75
SNHG20-201ENST00000366365 ZNF219Q9P2Y4 722 aaPredicted RBP19.73■□□□□ 0.75
SNHG20-201ENST00000366365 APLP2Q06481 763 aa19.72■□□□□ 0.75
SNHG20-201ENST00000366365 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
SNHG20-201ENST00000366365 DNAJC5Q9H3Z4 198 aa19.6■□□□□ 0.73
SNHG20-201ENST00000366365 LAMC3Q9Y6N6 1575 aa19.6■□□□□ 0.73
SNHG20-201ENST00000366365 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
SNHG20-201ENST00000366365 NESP48681 1621 aa19.57■□□□□ 0.72
SNHG20-201ENST00000366365 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
SNHG20-201ENST00000366365 FBXO3Q9UK99 471 aa19.45■□□□□ 0.7
SNHG20-201ENST00000366365 SPDYE4A6NLX3 237 aa19.41■□□□□ 0.7
SNHG20-201ENST00000366365 WIZO95785 1651 aa19.4■□□□□ 0.7
SNHG20-201ENST00000366365 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
SNHG20-201ENST00000366365 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
SNHG20-201ENST00000366365 MKRN4PQ13434 485 aaPredicted RBP19.34■□□□□ 0.69
SNHG20-201ENST00000366365 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
SNHG20-201ENST00000366365 TOP2AP11388 1531 aaKnown RBP19.3■□□□□ 0.68
SNHG20-201ENST00000366365 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
SNHG20-201ENST00000366365 FBLN2P98095 1184 aa19.27■□□□□ 0.68
SNHG20-201ENST00000366365 PROM2Q8N271 834 aa19.27■□□□□ 0.68
SNHG20-201ENST00000366365 CFTRP13569 1480 aa19.27■□□□□ 0.67
SNHG20-201ENST00000366365 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
SNHG20-201ENST00000366365 FANCD2Q9BXW9 1451 aa19.22■□□□□ 0.67
SNHG20-201ENST00000366365 WDR62O43379 1518 aa19.21■□□□□ 0.67
SNHG20-201ENST00000366365 TRHP20396 242 aaPredicted RBP19.18■□□□□ 0.66
SNHG20-201ENST00000366365 SPINK5Q9NQ38 1064 aaPredicted RBP19.14■□□□□ 0.65
SNHG20-201ENST00000366365 VASPP50552 380 aaPredicted RBP19.13■□□□□ 0.65
SNHG20-201ENST00000366365 POLA2Q14181 598 aa19.12■□□□□ 0.65
SNHG20-201ENST00000366365 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
SNHG20-201ENST00000366365 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
SNHG20-201ENST00000366365 RNF39Q9H2S5 420 aa19.03■□□□□ 0.64
SNHG20-201ENST00000366365 CAPN15O75808 1086 aa19.02■□□□□ 0.64
SNHG20-201ENST00000366365 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
SNHG20-201ENST00000366365 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms