RNA–Protein interactions for RNA: ENST00000365233.1

RNU4-12P-201, Transcript of RNA, U4 small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4-12P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-12P-201ENST00000365233 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
RNU4-12P-201ENST00000365233 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
RNU4-12P-201ENST00000365233 SENP3Q9H4L4 574 aaPredicted RBP20.13■□□□□ 0.81
RNU4-12P-201ENST00000365233 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
RNU4-12P-201ENST00000365233 FOXD1Q16676 465 aa18.66■□□□□ 0.58
RNU4-12P-201ENST00000365233 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
RNU4-12P-201ENST00000365233 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
RNU4-12P-201ENST00000365233 ADRA2BP18089 450 aa17.55■□□□□ 0.4
RNU4-12P-201ENST00000365233 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
RNU4-12P-201ENST00000365233 MSH5O43196 834 aa17.45■□□□□ 0.38
RNU4-12P-201ENST00000365233 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
RNU4-12P-201ENST00000365233 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
RNU4-12P-201ENST00000365233 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
RNU4-12P-201ENST00000365233 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
RNU4-12P-201ENST00000365233 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
RNU4-12P-201ENST00000365233 CNKSR2Q8WXI2 1034 aa15.65■□□□□ 0.1
RNU4-12P-201ENST00000365233 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
RNU4-12P-201ENST00000365233 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
RNU4-12P-201ENST00000365233 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
RNU4-12P-201ENST00000365233 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
RNU4-12P-201ENST00000365233 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
RNU4-12P-201ENST00000365233 KCNA4P22459 653 aa15.09■□□□□ 0.01
RNU4-12P-201ENST00000365233 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
RNU4-12P-201ENST00000365233 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
RNU4-12P-201ENST00000365233 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
RNU4-12P-201ENST00000365233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
RNU4-12P-201ENST00000365233 C1QBPQ07021 282 aaKnown RBP14.71□□□□□ -0.05
RNU4-12P-201ENST00000365233 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
RNU4-12P-201ENST00000365233 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
RNU4-12P-201ENST00000365233 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
RNU4-12P-201ENST00000365233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
RNU4-12P-201ENST00000365233 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
RNU4-12P-201ENST00000365233 APLP2Q06481 763 aa14.16□□□□□ -0.14
RNU4-12P-201ENST00000365233 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
RNU4-12P-201ENST00000365233 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
RNU4-12P-201ENST00000365233 CAPN15O75808 1086 aa14.1□□□□□ -0.15
RNU4-12P-201ENST00000365233 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
RNU4-12P-201ENST00000365233 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
RNU4-12P-201ENST00000365233 DSG3P32926 999 aa14□□□□□ -0.17
RNU4-12P-201ENST00000365233 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
RNU4-12P-201ENST00000365233 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
RNU4-12P-201ENST00000365233 ZBTB22O15209 634 aa13.87□□□□□ -0.19
RNU4-12P-201ENST00000365233 ABCB7O75027 752 aa13.76□□□□□ -0.21
RNU4-12P-201ENST00000365233 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
RNU4-12P-201ENST00000365233 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
RNU4-12P-201ENST00000365233 POLA2Q14181 598 aa13.62□□□□□ -0.23
RNU4-12P-201ENST00000365233 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
RNU4-12P-201ENST00000365233 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
RNU4-12P-201ENST00000365233 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
RNU4-12P-201ENST00000365233 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
RNU4-12P-201ENST00000365233 FBLN2P98095 1184 aa13.19□□□□□ -0.3
RNU4-12P-201ENST00000365233 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
RNU4-12P-201ENST00000365233 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
RNU4-12P-201ENST00000365233 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
RNU4-12P-201ENST00000365233 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
RNU4-12P-201ENST00000365233 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
RNU4-12P-201ENST00000365233 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
RNU4-12P-201ENST00000365233 POTEHQ6S545 545 aa13.02□□□□□ -0.33
RNU4-12P-201ENST00000365233 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
RNU4-12P-201ENST00000365233 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
RNU4-12P-201ENST00000365233 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
RNU4-12P-201ENST00000365233 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
RNU4-12P-201ENST00000365233 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
RNU4-12P-201ENST00000365233 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
RNU4-12P-201ENST00000365233 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNU4-12P-201ENST00000365233 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
RNU4-12P-201ENST00000365233 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
RNU4-12P-201ENST00000365233 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
RNU4-12P-201ENST00000365233 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
RNU4-12P-201ENST00000365233 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
RNU4-12P-201ENST00000365233 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
RNU4-12P-201ENST00000365233 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
RNU4-12P-201ENST00000365233 PROM2Q8N271 834 aa12.39□□□□□ -0.43
RNU4-12P-201ENST00000365233 HAX1O00165 279 aa12.37□□□□□ -0.43
RNU4-12P-201ENST00000365233 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
RNU4-12P-201ENST00000365233 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
RNU4-12P-201ENST00000365233 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
RNU4-12P-201ENST00000365233 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
RNU4-12P-201ENST00000365233 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
RNU4-12P-201ENST00000365233 EVX2Q03828 476 aa12.21□□□□□ -0.45
RNU4-12P-201ENST00000365233 FKBP8Q14318 412 aa12.18□□□□□ -0.46
RNU4-12P-201ENST00000365233 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
RNU4-12P-201ENST00000365233 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
RNU4-12P-201ENST00000365233 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
RNU4-12P-201ENST00000365233 CLCN6P51797 869 aa12.03□□□□□ -0.48
RNU4-12P-201ENST00000365233 GABBR2O75899 941 aa12□□□□□ -0.49
RNU4-12P-201ENST00000365233 PLEKHG5O94827 1062 aa12□□□□□ -0.49
RNU4-12P-201ENST00000365233 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
RNU4-12P-201ENST00000365233 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
RNU4-12P-201ENST00000365233 MIER1Q8N108 512 aa11.96□□□□□ -0.49
RNU4-12P-201ENST00000365233 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
RNU4-12P-201ENST00000365233 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
RNU4-12P-201ENST00000365233 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
RNU4-12P-201ENST00000365233 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
RNU4-12P-201ENST00000365233 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
RNU4-12P-201ENST00000365233 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
RNU4-12P-201ENST00000365233 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
RNU4-12P-201ENST00000365233 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
RNU4-12P-201ENST00000365233 RASEFQ8IZ41 740 aa11.76□□□□□ -0.53
RNU4-12P-201ENST00000365233 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms