RNA–Protein interactions for RNA: ENST00000364065.1

RNU6-1090P-201, Transcript of RNA, U6 small nuclear 1090, pseudogene, humanhuman

BASIC

Gene RNU6-1090P, Length 94 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1090P-201ENST00000364065 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
RNU6-1090P-201ENST00000364065 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
RNU6-1090P-201ENST00000364065 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
RNU6-1090P-201ENST00000364065 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
RNU6-1090P-201ENST00000364065 FOXD1Q16676 465 aa17.48■□□□□ 0.39
RNU6-1090P-201ENST00000364065 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
RNU6-1090P-201ENST00000364065 ADRA2BP18089 450 aa16.47■□□□□ 0.23
RNU6-1090P-201ENST00000364065 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
RNU6-1090P-201ENST00000364065 PPP6R1Q9UPN7 881 aa16.46■□□□□ 0.23
RNU6-1090P-201ENST00000364065 MSH5O43196 834 aa16.42■□□□□ 0.22
RNU6-1090P-201ENST00000364065 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
RNU6-1090P-201ENST00000364065 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
RNU6-1090P-201ENST00000364065 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
RNU6-1090P-201ENST00000364065 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
RNU6-1090P-201ENST00000364065 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
RNU6-1090P-201ENST00000364065 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
RNU6-1090P-201ENST00000364065 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
RNU6-1090P-201ENST00000364065 HOXD11P31277 338 aaPredicted RBP14.54□□□□□ -0.08
RNU6-1090P-201ENST00000364065 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
RNU6-1090P-201ENST00000364065 DCAF8L1A6NGE4 600 aa14.4□□□□□ -0.1
RNU6-1090P-201ENST00000364065 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
RNU6-1090P-201ENST00000364065 KCNA4P22459 653 aa14.2□□□□□ -0.14
RNU6-1090P-201ENST00000364065 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
RNU6-1090P-201ENST00000364065 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
RNU6-1090P-201ENST00000364065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
RNU6-1090P-201ENST00000364065 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
RNU6-1090P-201ENST00000364065 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.2
RNU6-1090P-201ENST00000364065 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
RNU6-1090P-201ENST00000364065 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
RNU6-1090P-201ENST00000364065 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
RNU6-1090P-201ENST00000364065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
RNU6-1090P-201ENST00000364065 APLP2Q06481 763 aa13.45□□□□□ -0.26
RNU6-1090P-201ENST00000364065 HNRNPUL2Q1KMD3 747 aaKnown RBP13.45□□□□□ -0.26
RNU6-1090P-201ENST00000364065 SAMD1Q6SPF0 538 aaPredicted RBP13.34□□□□□ -0.27
RNU6-1090P-201ENST00000364065 CAPN15O75808 1086 aa13.32□□□□□ -0.28
RNU6-1090P-201ENST00000364065 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
RNU6-1090P-201ENST00000364065 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
RNU6-1090P-201ENST00000364065 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
RNU6-1090P-201ENST00000364065 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
RNU6-1090P-201ENST00000364065 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
RNU6-1090P-201ENST00000364065 DSG3P32926 999 aa13.12□□□□□ -0.31
RNU6-1090P-201ENST00000364065 ZBTB22O15209 634 aa12.99□□□□□ -0.33
RNU6-1090P-201ENST00000364065 ABCB7O75027 752 aa12.97□□□□□ -0.33
RNU6-1090P-201ENST00000364065 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
RNU6-1090P-201ENST00000364065 POLA2Q14181 598 aa12.84□□□□□ -0.35
RNU6-1090P-201ENST00000364065 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
RNU6-1090P-201ENST00000364065 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
RNU6-1090P-201ENST00000364065 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
RNU6-1090P-201ENST00000364065 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
RNU6-1090P-201ENST00000364065 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
RNU6-1090P-201ENST00000364065 FBLN2P98095 1184 aa12.51□□□□□ -0.41
RNU6-1090P-201ENST00000364065 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
RNU6-1090P-201ENST00000364065 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
RNU6-1090P-201ENST00000364065 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
RNU6-1090P-201ENST00000364065 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
RNU6-1090P-201ENST00000364065 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
RNU6-1090P-201ENST00000364065 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
RNU6-1090P-201ENST00000364065 POTEHQ6S545 545 aa12.21□□□□□ -0.45
RNU6-1090P-201ENST00000364065 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
RNU6-1090P-201ENST00000364065 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
RNU6-1090P-201ENST00000364065 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
RNU6-1090P-201ENST00000364065 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
RNU6-1090P-201ENST00000364065 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
RNU6-1090P-201ENST00000364065 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
RNU6-1090P-201ENST00000364065 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
RNU6-1090P-201ENST00000364065 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
RNU6-1090P-201ENST00000364065 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
RNU6-1090P-201ENST00000364065 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
RNU6-1090P-201ENST00000364065 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
RNU6-1090P-201ENST00000364065 PRR29P0C7W0 189 aa11.82□□□□□ -0.52
RNU6-1090P-201ENST00000364065 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
RNU6-1090P-201ENST00000364065 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
RNU6-1090P-201ENST00000364065 HAX1O00165 279 aa11.69□□□□□ -0.54
RNU6-1090P-201ENST00000364065 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
RNU6-1090P-201ENST00000364065 PROM2Q8N271 834 aa11.61□□□□□ -0.55
RNU6-1090P-201ENST00000364065 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
RNU6-1090P-201ENST00000364065 FKBP8Q14318 412 aa11.54□□□□□ -0.56
RNU6-1090P-201ENST00000364065 FARP1Q9Y4F1 1045 aaPredicted RBP11.54□□□□□ -0.56
RNU6-1090P-201ENST00000364065 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
RNU6-1090P-201ENST00000364065 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
RNU6-1090P-201ENST00000364065 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
RNU6-1090P-201ENST00000364065 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
RNU6-1090P-201ENST00000364065 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
RNU6-1090P-201ENST00000364065 EVX2Q03828 476 aa11.39□□□□□ -0.59
RNU6-1090P-201ENST00000364065 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
RNU6-1090P-201ENST00000364065 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
RNU6-1090P-201ENST00000364065 CLCN6P51797 869 aa11.36□□□□□ -0.59
RNU6-1090P-201ENST00000364065 MIER1Q8N108 512 aa11.35□□□□□ -0.59
RNU6-1090P-201ENST00000364065 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
RNU6-1090P-201ENST00000364065 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
RNU6-1090P-201ENST00000364065 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
RNU6-1090P-201ENST00000364065 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
RNU6-1090P-201ENST00000364065 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
RNU6-1090P-201ENST00000364065 GABBR2O75899 941 aa11.26□□□□□ -0.61
RNU6-1090P-201ENST00000364065 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
RNU6-1090P-201ENST00000364065 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
RNU6-1090P-201ENST00000364065 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
RNU6-1090P-201ENST00000364065 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
RNU6-1090P-201ENST00000364065 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
RNU6-1090P-201ENST00000364065 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms