RNA–Protein interactions for RNA: ENST00000363693.1

RNU6-640P-201, Transcript of RNA, U6 small nuclear 640, pseudogene, humanhuman

BASIC

Gene RNU6-640P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-640P-201ENST00000363693 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
RNU6-640P-201ENST00000363693 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
RNU6-640P-201ENST00000363693 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
RNU6-640P-201ENST00000363693 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
RNU6-640P-201ENST00000363693 PHF23Q9BUL5 403 aaPredicted RBP12.5□□□□□ -0.41
RNU6-640P-201ENST00000363693 FOXD1Q16676 465 aa11.98□□□□□ -0.49
RNU6-640P-201ENST00000363693 MSH5O43196 834 aa11.57□□□□□ -0.56
RNU6-640P-201ENST00000363693 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
RNU6-640P-201ENST00000363693 PPP6R1Q9UPN7 881 aa10.57□□□□□ -0.72
RNU6-640P-201ENST00000363693 ADRA2BP18089 450 aa10.54□□□□□ -0.72
RNU6-640P-201ENST00000363693 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
RNU6-640P-201ENST00000363693 PLPPR3Q6T4P5 718 aa10.32□□□□□ -0.76
RNU6-640P-201ENST00000363693 DMRT2Q9Y5R5 561 aa10□□□□□ -0.81
RNU6-640P-201ENST00000363693 MAPK8IP2Q13387 824 aaPredicted RBP9.9□□□□□ -0.82
RNU6-640P-201ENST00000363693 DCAF8L1A6NGE4 600 aa9.77□□□□□ -0.85
RNU6-640P-201ENST00000363693 RNF39Q9H2S5 420 aa9.75□□□□□ -0.85
RNU6-640P-201ENST00000363693 POTEHQ6S545 545 aa9.74□□□□□ -0.85
RNU6-640P-201ENST00000363693 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.86
RNU6-640P-201ENST00000363693 C1QBPQ07021 282 aaKnown RBP9.6□□□□□ -0.87
RNU6-640P-201ENST00000363693 HOXD11P31277 338 aaPredicted RBP9.29□□□□□ -0.92
RNU6-640P-201ENST00000363693 DNAJC5BQ9UF47 199 aa9.1□□□□□ -0.95
RNU6-640P-201ENST00000363693 RNF216Q9NWF9 866 aaPredicted RBP9.05□□□□□ -0.96
RNU6-640P-201ENST00000363693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.97□□□□□ -0.97
RNU6-640P-201ENST00000363693 CNKSR2Q8WXI2 1034 aa8.95□□□□□ -0.98
RNU6-640P-201ENST00000363693 PPP4R3CPQ6ZMV5 832 aa8.93□□□□□ -0.98
RNU6-640P-201ENST00000363693 DSG3P32926 999 aa8.88□□□□□ -0.99
RNU6-640P-201ENST00000363693 CAPN15O75808 1086 aa8.84□□□□□ -0.99
RNU6-640P-201ENST00000363693 SP7Q8TDD2 431 aaPredicted RBP8.77□□□□□ -1.01
RNU6-640P-201ENST00000363693 SPINK5Q9NQ38 1064 aaPredicted RBP8.74□□□□□ -1.01
RNU6-640P-201ENST00000363693 CHRDL2Q6WN34 429 aa8.66□□□□□ -1.02
RNU6-640P-201ENST00000363693 U3KPZ7 1027 aaPredicted RBP8.62□□□□□ -1.03
RNU6-640P-201ENST00000363693 RBM42Q9BTD8 480 aaKnown RBP8.57□□□□□ -1.04
RNU6-640P-201ENST00000363693 ABCB7O75027 752 aa8.55□□□□□ -1.04
RNU6-640P-201ENST00000363693 TRHP20396 242 aaPredicted RBP8.51□□□□□ -1.05
RNU6-640P-201ENST00000363693 PLSCR2Q9NRY7 297 aa8.46□□□□□ -1.06
RNU6-640P-201ENST00000363693 ZNF219Q9P2Y4 722 aaPredicted RBP8.44□□□□□ -1.06
RNU6-640P-201ENST00000363693 NCBP3Q53F19 620 aaKnown RBP8.4□□□□□ -1.06
RNU6-640P-201ENST00000363693 HAX1O00165 279 aa8.39□□□□□ -1.07
RNU6-640P-201ENST00000363693 APLP2Q06481 763 aa8.39□□□□□ -1.07
RNU6-640P-201ENST00000363693 PIP4P2Q8N4L2 257 aa8.26□□□□□ -1.09
RNU6-640P-201ENST00000363693 NPM3O75607 178 aaKnown RBP8.22□□□□□ -1.09
RNU6-640P-201ENST00000363693 LHX8Q68G74 356 aa8.21□□□□□ -1.1
RNU6-640P-201ENST00000363693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.17□□□□□ -1.1
RNU6-640P-201ENST00000363693 HNRNPUL2Q1KMD3 747 aaKnown RBP8.17□□□□□ -1.1
RNU6-640P-201ENST00000363693 AKT1S1Q96B36 256 aa8.16□□□□□ -1.1
RNU6-640P-201ENST00000363693 EVX2Q03828 476 aa8.11□□□□□ -1.11
RNU6-640P-201ENST00000363693 SAMD1Q6SPF0 538 aaPredicted RBP8.07□□□□□ -1.12
RNU6-640P-201ENST00000363693 REM2Q8IYK8 340 aaPredicted RBP8.07□□□□□ -1.12
RNU6-640P-201ENST00000363693 FXR2P51116 673 aaKnown RBP eCLIP8.05□□□□□ -1.12
RNU6-640P-201ENST00000363693 POLA2Q14181 598 aa8.05□□□□□ -1.12
RNU6-640P-201ENST00000363693 PITPNM1O00562 1244 aa8.01□□□□□ -1.13
RNU6-640P-201ENST00000363693 SLC4A2P04920 1241 aa8.01□□□□□ -1.13
RNU6-640P-201ENST00000363693 GABBR2O75899 941 aa7.93□□□□□ -1.14
RNU6-640P-201ENST00000363693 ZBTB12Q9Y330 459 aaPredicted RBP7.86□□□□□ -1.15
RNU6-640P-201ENST00000363693 OSCARQ8IYS5 282 aa7.85□□□□□ -1.15
RNU6-640P-201ENST00000363693 C19orf67A6NJJ6 358 aa7.83□□□□□ -1.16
RNU6-640P-201ENST00000363693 PRKAR2AP13861 404 aaKnown RBP7.83□□□□□ -1.16
RNU6-640P-201ENST00000363693 POTEMA6NI47 508 aa7.8□□□□□ -1.16
RNU6-640P-201ENST00000363693 POTEGQ6S5H5 508 aa7.75□□□□□ -1.17
RNU6-640P-201ENST00000363693 POTEIP0CG38 1075 aa7.71□□□□□ -1.18
RNU6-640P-201ENST00000363693 PCDH10Q9P2E7 1040 aa7.68□□□□□ -1.18
RNU6-640P-201ENST00000363693 CLEC11AQ9Y240 323 aa7.68□□□□□ -1.18
RNU6-640P-201ENST00000363693 MYCNP04198 464 aaPredicted RBP7.66□□□□□ -1.18
RNU6-640P-201ENST00000363693 DCBLD2Q96PD2 775 aa7.64□□□□□ -1.19
RNU6-640P-201ENST00000363693 SPDYE1Q8NFV5 336 aaPredicted RBP7.6□□□□□ -1.19
RNU6-640P-201ENST00000363693 OTUD5Q96G74 571 aa7.6□□□□□ -1.19
RNU6-640P-201ENST00000363693 CHADLQ6NUI6 762 aa7.57□□□□□ -1.2
RNU6-640P-201ENST00000363693 CD44P16070 742 aaKnown RBP7.54□□□□□ -1.2
RNU6-640P-201ENST00000363693 CLCN6P51797 869 aa7.53□□□□□ -1.2
RNU6-640P-201ENST00000363693 SPDYE2BA6NHP3 402 aa7.52□□□□□ -1.21
RNU6-640P-201ENST00000363693 SPDYE6P0CI01 402 aa7.52□□□□□ -1.21
RNU6-640P-201ENST00000363693 SPDYE2Q495Y8 402 aa7.52□□□□□ -1.21
RNU6-640P-201ENST00000363693 ATF5Q9Y2D1 282 aaPredicted RBP7.48□□□□□ -1.21
RNU6-640P-201ENST00000363693 POTEB2H3BUK9 544 aa7.45□□□□□ -1.22
RNU6-640P-201ENST00000363693 PRR29P0C7W0 189 aa7.41□□□□□ -1.22
RNU6-640P-201ENST00000363693 KCNA4P22459 653 aa7.38□□□□□ -1.23
RNU6-640P-201ENST00000363693 FAM163AQ96GL9 167 aaPredicted RBP7.38□□□□□ -1.23
RNU6-640P-201ENST00000363693 FBLN2P98095 1184 aa7.35□□□□□ -1.23
RNU6-640P-201ENST00000363693 FARP1Q9Y4F1 1045 aaPredicted RBP7.35□□□□□ -1.23
RNU6-640P-201ENST00000363693 ZNF579Q8NAF0 562 aaKnown RBP7.34□□□□□ -1.23
RNU6-640P-201ENST00000363693 LCE2DQ5TA82 110 aaPredicted RBP7.33□□□□□ -1.24
RNU6-640P-201ENST00000363693 ZNF692Q9BU19 519 aaPredicted RBP7.33□□□□□ -1.24
RNU6-640P-201ENST00000363693 GALR2O43603 387 aaPredicted RBP7.32□□□□□ -1.24
RNU6-640P-201ENST00000363693 ZRANB1Q9UGI0 708 aa7.31□□□□□ -1.24
RNU6-640P-201ENST00000363693 MAMSTRQ6ZN01 415 aa7.3□□□□□ -1.24
RNU6-640P-201ENST00000363693 CDAN1Q8IWY9 1227 aa7.3□□□□□ -1.24
RNU6-640P-201ENST00000363693 SSUH2Q9Y2M2 353 aa7.29□□□□□ -1.24
RNU6-640P-201ENST00000363693 SCUBE2Q9NQ36 999 aa7.24□□□□□ -1.25
RNU6-640P-201ENST00000363693 METRNQ9UJH8 293 aa7.24□□□□□ -1.25
RNU6-640P-201ENST00000363693 PELP1Q8IZL8 1130 aaKnown RBP7.2□□□□□ -1.26
RNU6-640P-201ENST00000363693 POTEJP0CG39 1038 aa7.19□□□□□ -1.26
RNU6-640P-201ENST00000363693 PABPN1Q86U42 306 aaKnown RBP eCLIP7.19□□□□□ -1.26
RNU6-640P-201ENST00000363693 MMRN1Q13201 1228 aa7.18□□□□□ -1.26
RNU6-640P-201ENST00000363693 SLC39A7Q92504 469 aa7.17□□□□□ -1.26
RNU6-640P-201ENST00000363693 C7P10643 843 aa7.16□□□□□ -1.26
RNU6-640P-201ENST00000363693 FOXD4L1Q9NU39 408 aa7.16□□□□□ -1.26
RNU6-640P-201ENST00000363693 PAK3O75914 559 aaPredicted RBP7.14□□□□□ -1.27
RNU6-640P-201ENST00000363693 PHF12Q96QT6 1004 aa7.12□□□□□ -1.27
RNU6-640P-201ENST00000363693 SPNS2Q8IVW8 549 aa7.11□□□□□ -1.27
RNU6-640P-201ENST00000363693 MKRN4PQ13434 485 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms