RNA–Protein interactions for RNA: ENST00000362985.1

RNU6-490P-201, Transcript of RNA, U6 small nuclear 490, pseudogene, humanhuman

BASIC

Gene RNU6-490P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-490P-201ENST00000362985 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
RNU6-490P-201ENST00000362985 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
RNU6-490P-201ENST00000362985 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
RNU6-490P-201ENST00000362985 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
RNU6-490P-201ENST00000362985 FOXD1Q16676 465 aa14.7□□□□□ -0.06
RNU6-490P-201ENST00000362985 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
RNU6-490P-201ENST00000362985 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
RNU6-490P-201ENST00000362985 ADRA2BP18089 450 aa13.82□□□□□ -0.2
RNU6-490P-201ENST00000362985 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
RNU6-490P-201ENST00000362985 MSH5O43196 834 aa13.62□□□□□ -0.23
RNU6-490P-201ENST00000362985 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
RNU6-490P-201ENST00000362985 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
RNU6-490P-201ENST00000362985 SCAF1Q9H7N4 1312 aaKnown RBP12.54□□□□□ -0.4
RNU6-490P-201ENST00000362985 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
RNU6-490P-201ENST00000362985 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
RNU6-490P-201ENST00000362985 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
RNU6-490P-201ENST00000362985 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
RNU6-490P-201ENST00000362985 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
RNU6-490P-201ENST00000362985 DCAF8L1A6NGE4 600 aa11.97□□□□□ -0.49
RNU6-490P-201ENST00000362985 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
RNU6-490P-201ENST00000362985 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
RNU6-490P-201ENST00000362985 KCNA4P22459 653 aa11.77□□□□□ -0.53
RNU6-490P-201ENST00000362985 RNF39Q9H2S5 420 aa11.68□□□□□ -0.54
RNU6-490P-201ENST00000362985 CACNB1Q02641 598 aaPredicted RBP11.64□□□□□ -0.55
RNU6-490P-201ENST00000362985 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
RNU6-490P-201ENST00000362985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.57
RNU6-490P-201ENST00000362985 C1QBPQ07021 282 aaKnown RBP11.49□□□□□ -0.57
RNU6-490P-201ENST00000362985 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
RNU6-490P-201ENST00000362985 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
RNU6-490P-201ENST00000362985 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
RNU6-490P-201ENST00000362985 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
RNU6-490P-201ENST00000362985 CAPN15O75808 1086 aa11.05□□□□□ -0.64
RNU6-490P-201ENST00000362985 DSG3P32926 999 aa10.99□□□□□ -0.65
RNU6-490P-201ENST00000362985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
RNU6-490P-201ENST00000362985 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
RNU6-490P-201ENST00000362985 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
RNU6-490P-201ENST00000362985 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
RNU6-490P-201ENST00000362985 SAMD1Q6SPF0 538 aaPredicted RBP10.92□□□□□ -0.66
RNU6-490P-201ENST00000362985 APLP2Q06481 763 aa10.9□□□□□ -0.66
RNU6-490P-201ENST00000362985 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
RNU6-490P-201ENST00000362985 ZNF219Q9P2Y4 722 aaPredicted RBP10.86□□□□□ -0.67
RNU6-490P-201ENST00000362985 ZBTB22O15209 634 aa10.85□□□□□ -0.67
RNU6-490P-201ENST00000362985 ABCB7O75027 752 aa10.85□□□□□ -0.67
RNU6-490P-201ENST00000362985 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
RNU6-490P-201ENST00000362985 POLA2Q14181 598 aa10.67□□□□□ -0.7
RNU6-490P-201ENST00000362985 ATXN8OSP0DMR3 200 aa10.53□□□□□ -0.72
RNU6-490P-201ENST00000362985 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
RNU6-490P-201ENST00000362985 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
RNU6-490P-201ENST00000362985 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
RNU6-490P-201ENST00000362985 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
RNU6-490P-201ENST00000362985 OSCARQ8IYS5 282 aa10.32□□□□□ -0.76
RNU6-490P-201ENST00000362985 POTEHQ6S545 545 aa10.31□□□□□ -0.76
RNU6-490P-201ENST00000362985 MKRN4PQ13434 485 aaPredicted RBP10.25□□□□□ -0.77
RNU6-490P-201ENST00000362985 AKT1S1Q96B36 256 aa10.24□□□□□ -0.77
RNU6-490P-201ENST00000362985 FBLN2P98095 1184 aa10.21□□□□□ -0.77
RNU6-490P-201ENST00000362985 CHRDL2Q6WN34 429 aa10.17□□□□□ -0.78
RNU6-490P-201ENST00000362985 REM2Q8IYK8 340 aaPredicted RBP10.17□□□□□ -0.78
RNU6-490P-201ENST00000362985 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
RNU6-490P-201ENST00000362985 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
RNU6-490P-201ENST00000362985 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
RNU6-490P-201ENST00000362985 PITPNM1O00562 1244 aa10.06□□□□□ -0.8
RNU6-490P-201ENST00000362985 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
RNU6-490P-201ENST00000362985 SSUH2Q9Y2M2 353 aa10.03□□□□□ -0.8
RNU6-490P-201ENST00000362985 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
RNU6-490P-201ENST00000362985 FXR2P51116 673 aaKnown RBP eCLIP9.95□□□□□ -0.82
RNU6-490P-201ENST00000362985 SPDYE1Q8NFV5 336 aaPredicted RBP9.91□□□□□ -0.82
RNU6-490P-201ENST00000362985 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
RNU6-490P-201ENST00000362985 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
RNU6-490P-201ENST00000362985 PRKAR2AP13861 404 aaKnown RBP9.79□□□□□ -0.84
RNU6-490P-201ENST00000362985 SPDYE4A6NLX3 237 aa9.78□□□□□ -0.84
RNU6-490P-201ENST00000362985 HAX1O00165 279 aa9.75□□□□□ -0.85
RNU6-490P-201ENST00000362985 CHADLQ6NUI6 762 aa9.75□□□□□ -0.85
RNU6-490P-201ENST00000362985 PRR29P0C7W0 189 aa9.74□□□□□ -0.85
RNU6-490P-201ENST00000362985 EVX2Q03828 476 aa9.72□□□□□ -0.85
RNU6-490P-201ENST00000362985 SP7Q8TDD2 431 aaPredicted RBP9.71□□□□□ -0.86
RNU6-490P-201ENST00000362985 C19orf67A6NJJ6 358 aa9.63□□□□□ -0.87
RNU6-490P-201ENST00000362985 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
RNU6-490P-201ENST00000362985 PROM2Q8N271 834 aa9.59□□□□□ -0.87
RNU6-490P-201ENST00000362985 CREBZFQ9NS37 354 aa9.59□□□□□ -0.87
RNU6-490P-201ENST00000362985 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
RNU6-490P-201ENST00000362985 CD44P16070 742 aaKnown RBP9.48□□□□□ -0.89
RNU6-490P-201ENST00000362985 GABBR2O75899 941 aa9.46□□□□□ -0.9
RNU6-490P-201ENST00000362985 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
RNU6-490P-201ENST00000362985 FKBP8Q14318 412 aa9.44□□□□□ -0.9
RNU6-490P-201ENST00000362985 ZRANB1Q9UGI0 708 aa9.37□□□□□ -0.91
RNU6-490P-201ENST00000362985 NPM1P06748 294 aaKnown RBP eCLIP9.34□□□□□ -0.91
RNU6-490P-201ENST00000362985 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
RNU6-490P-201ENST00000362985 MIER1Q8N108 512 aa9.31□□□□□ -0.92
RNU6-490P-201ENST00000362985 POTEIP0CG38 1075 aa9.3□□□□□ -0.92
RNU6-490P-201ENST00000362985 PHF12Q96QT6 1004 aa9.28□□□□□ -0.92
RNU6-490P-201ENST00000362985 PAK3O75914 559 aaPredicted RBP9.26□□□□□ -0.93
RNU6-490P-201ENST00000362985 CLCN6P51797 869 aa9.26□□□□□ -0.93
RNU6-490P-201ENST00000362985 GALR2O43603 387 aaPredicted RBP9.25□□□□□ -0.93
RNU6-490P-201ENST00000362985 PLCD3Q8N3E9 789 aa9.23□□□□□ -0.93
RNU6-490P-201ENST00000362985 TSPYL2Q9H2G4 693 aaPredicted RBP9.23□□□□□ -0.93
RNU6-490P-201ENST00000362985 PLEKHG5O94827 1062 aa9.21□□□□□ -0.94
RNU6-490P-201ENST00000362985 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
RNU6-490P-201ENST00000362985 DCBLD2Q96PD2 775 aa9.18□□□□□ -0.94
RNU6-490P-201ENST00000362985 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
RNU6-490P-201ENST00000362985 NUBP1P53384 320 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms