RNA–Protein interactions for RNA: ENST00000362782.2

RNU1-35P-201, Transcript of RNA, U1 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU1-35P, Length 153 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-35P-201ENST00000362782 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
RNU1-35P-201ENST00000362782 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
RNU1-35P-201ENST00000362782 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
RNU1-35P-201ENST00000362782 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
RNU1-35P-201ENST00000362782 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
RNU1-35P-201ENST00000362782 FOXD1Q16676 465 aa19.07■□□□□ 0.64
RNU1-35P-201ENST00000362782 MSH5O43196 834 aa18.35■□□□□ 0.53
RNU1-35P-201ENST00000362782 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
RNU1-35P-201ENST00000362782 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
RNU1-35P-201ENST00000362782 ADRA2BP18089 450 aa16.89■□□□□ 0.29
RNU1-35P-201ENST00000362782 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
RNU1-35P-201ENST00000362782 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
RNU1-35P-201ENST00000362782 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
RNU1-35P-201ENST00000362782 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
RNU1-35P-201ENST00000362782 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
RNU1-35P-201ENST00000362782 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
RNU1-35P-201ENST00000362782 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
RNU1-35P-201ENST00000362782 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
RNU1-35P-201ENST00000362782 POTEHQ6S545 545 aa15.2■□□□□ 0.02
RNU1-35P-201ENST00000362782 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
RNU1-35P-201ENST00000362782 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
RNU1-35P-201ENST00000362782 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
RNU1-35P-201ENST00000362782 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
RNU1-35P-201ENST00000362782 PPP4R3CPQ6ZMV5 832 aa14.46□□□□□ -0.09
RNU1-35P-201ENST00000362782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
RNU1-35P-201ENST00000362782 DSG3P32926 999 aa14.16□□□□□ -0.14
RNU1-35P-201ENST00000362782 CAPN15O75808 1086 aa14.01□□□□□ -0.17
RNU1-35P-201ENST00000362782 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
RNU1-35P-201ENST00000362782 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
RNU1-35P-201ENST00000362782 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
RNU1-35P-201ENST00000362782 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
RNU1-35P-201ENST00000362782 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
RNU1-35P-201ENST00000362782 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
RNU1-35P-201ENST00000362782 ABCB7O75027 752 aa13.52□□□□□ -0.25
RNU1-35P-201ENST00000362782 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
RNU1-35P-201ENST00000362782 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
RNU1-35P-201ENST00000362782 APLP2Q06481 763 aa13.48□□□□□ -0.25
RNU1-35P-201ENST00000362782 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
RNU1-35P-201ENST00000362782 HAX1O00165 279 aa13.2□□□□□ -0.3
RNU1-35P-201ENST00000362782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
RNU1-35P-201ENST00000362782 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
RNU1-35P-201ENST00000362782 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
RNU1-35P-201ENST00000362782 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
RNU1-35P-201ENST00000362782 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
RNU1-35P-201ENST00000362782 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
RNU1-35P-201ENST00000362782 PLSCR2Q9NRY7 297 aa12.95□□□□□ -0.34
RNU1-35P-201ENST00000362782 POLA2Q14181 598 aa12.92□□□□□ -0.34
RNU1-35P-201ENST00000362782 LHX8Q68G74 356 aa12.9□□□□□ -0.34
RNU1-35P-201ENST00000362782 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
RNU1-35P-201ENST00000362782 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
RNU1-35P-201ENST00000362782 EVX2Q03828 476 aa12.86□□□□□ -0.35
RNU1-35P-201ENST00000362782 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
RNU1-35P-201ENST00000362782 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
RNU1-35P-201ENST00000362782 GABBR2O75899 941 aa12.58□□□□□ -0.4
RNU1-35P-201ENST00000362782 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
RNU1-35P-201ENST00000362782 OSCARQ8IYS5 282 aa12.49□□□□□ -0.41
RNU1-35P-201ENST00000362782 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
RNU1-35P-201ENST00000362782 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
RNU1-35P-201ENST00000362782 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
RNU1-35P-201ENST00000362782 POTEMA6NI47 508 aa12.19□□□□□ -0.46
RNU1-35P-201ENST00000362782 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
RNU1-35P-201ENST00000362782 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
RNU1-35P-201ENST00000362782 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
RNU1-35P-201ENST00000362782 CLCN6P51797 869 aa12.16□□□□□ -0.46
RNU1-35P-201ENST00000362782 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
RNU1-35P-201ENST00000362782 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
RNU1-35P-201ENST00000362782 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
RNU1-35P-201ENST00000362782 KCNA4P22459 653 aa12.13□□□□□ -0.47
RNU1-35P-201ENST00000362782 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
RNU1-35P-201ENST00000362782 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
RNU1-35P-201ENST00000362782 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
RNU1-35P-201ENST00000362782 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
RNU1-35P-201ENST00000362782 CHADLQ6NUI6 762 aa12□□□□□ -0.49
RNU1-35P-201ENST00000362782 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
RNU1-35P-201ENST00000362782 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
RNU1-35P-201ENST00000362782 FBLN2P98095 1184 aa11.87□□□□□ -0.51
RNU1-35P-201ENST00000362782 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
RNU1-35P-201ENST00000362782 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
RNU1-35P-201ENST00000362782 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
RNU1-35P-201ENST00000362782 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
RNU1-35P-201ENST00000362782 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
RNU1-35P-201ENST00000362782 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
RNU1-35P-201ENST00000362782 ZRANB1Q9UGI0 708 aa11.65□□□□□ -0.54
RNU1-35P-201ENST00000362782 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
RNU1-35P-201ENST00000362782 FAM163AQ96GL9 167 aaPredicted RBP11.61□□□□□ -0.55
RNU1-35P-201ENST00000362782 MAMSTRQ6ZN01 415 aa11.6□□□□□ -0.55
RNU1-35P-201ENST00000362782 LCE2DQ5TA82 110 aaPredicted RBP11.58□□□□□ -0.56
RNU1-35P-201ENST00000362782 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
RNU1-35P-201ENST00000362782 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
RNU1-35P-201ENST00000362782 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
RNU1-35P-201ENST00000362782 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
RNU1-35P-201ENST00000362782 CDAN1Q8IWY9 1227 aa11.47□□□□□ -0.57
RNU1-35P-201ENST00000362782 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
RNU1-35P-201ENST00000362782 C7P10643 843 aa11.46□□□□□ -0.57
RNU1-35P-201ENST00000362782 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
RNU1-35P-201ENST00000362782 SLC39A7Q92504 469 aa11.44□□□□□ -0.58
RNU1-35P-201ENST00000362782 SCUBE2Q9NQ36 999 aa11.44□□□□□ -0.58
RNU1-35P-201ENST00000362782 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
RNU1-35P-201ENST00000362782 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
RNU1-35P-201ENST00000362782 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms