RNA–Protein interactions for RNA: ENST00000362644.1

RNU6-235P-201, Transcript of RNA, U6 small nuclear 235, pseudogene, humanhuman

BASIC

Gene RNU6-235P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-235P-201ENST00000362644 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
RNU6-235P-201ENST00000362644 CHIC1Q5VXU3 224 aa13.87□□□□□ -0.19
RNU6-235P-201ENST00000362644 SENP3Q9H4L4 574 aaPredicted RBP12.74□□□□□ -0.37
RNU6-235P-201ENST00000362644 PHF23Q9BUL5 403 aaPredicted RBP12.45□□□□□ -0.42
RNU6-235P-201ENST00000362644 FOXD1Q16676 465 aa11.81□□□□□ -0.52
RNU6-235P-201ENST00000362644 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
RNU6-235P-201ENST00000362644 MSH5O43196 834 aa11.34□□□□□ -0.59
RNU6-235P-201ENST00000362644 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
RNU6-235P-201ENST00000362644 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
RNU6-235P-201ENST00000362644 PPP6R1Q9UPN7 881 aa10.68□□□□□ -0.7
RNU6-235P-201ENST00000362644 ADRA2BP18089 450 aa10.63□□□□□ -0.71
RNU6-235P-201ENST00000362644 DMRT2Q9Y5R5 561 aa10□□□□□ -0.81
RNU6-235P-201ENST00000362644 SCAF1Q9H7N4 1312 aaKnown RBP9.93□□□□□ -0.82
RNU6-235P-201ENST00000362644 CACNB1Q02641 598 aaPredicted RBP9.92□□□□□ -0.82
RNU6-235P-201ENST00000362644 MAPK8IP2Q13387 824 aaPredicted RBP9.87□□□□□ -0.83
RNU6-235P-201ENST00000362644 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
RNU6-235P-201ENST00000362644 DCAF8L1A6NGE4 600 aa9.57□□□□□ -0.88
RNU6-235P-201ENST00000362644 HOXD11P31277 338 aaPredicted RBP9.48□□□□□ -0.89
RNU6-235P-201ENST00000362644 C1QBPQ07021 282 aaKnown RBP9.48□□□□□ -0.89
RNU6-235P-201ENST00000362644 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
RNU6-235P-201ENST00000362644 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
RNU6-235P-201ENST00000362644 PPP4R3CPQ6ZMV5 832 aa9.32□□□□□ -0.92
RNU6-235P-201ENST00000362644 CNKSR2Q8WXI2 1034 aa9.3□□□□□ -0.92
RNU6-235P-201ENST00000362644 POTEHQ6S545 545 aa9.07□□□□□ -0.96
RNU6-235P-201ENST00000362644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.96
RNU6-235P-201ENST00000362644 NCBP3Q53F19 620 aaKnown RBP8.96□□□□□ -0.98
RNU6-235P-201ENST00000362644 DSG3P32926 999 aa8.81□□□□□ -1
RNU6-235P-201ENST00000362644 CAPN15O75808 1086 aa8.78□□□□□ -1
RNU6-235P-201ENST00000362644 U3KPZ7 1027 aaPredicted RBP8.75□□□□□ -1.01
RNU6-235P-201ENST00000362644 NPM3O75607 178 aaKnown RBP8.7□□□□□ -1.02
RNU6-235P-201ENST00000362644 SPINK5Q9NQ38 1064 aaPredicted RBP8.7□□□□□ -1.02
RNU6-235P-201ENST00000362644 APLP2Q06481 763 aa8.66□□□□□ -1.02
RNU6-235P-201ENST00000362644 ZNF219Q9P2Y4 722 aaPredicted RBP8.59□□□□□ -1.03
RNU6-235P-201ENST00000362644 RBM42Q9BTD8 480 aaKnown RBP8.54□□□□□ -1.04
RNU6-235P-201ENST00000362644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.53□□□□□ -1.04
RNU6-235P-201ENST00000362644 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
RNU6-235P-201ENST00000362644 TRHP20396 242 aaPredicted RBP8.51□□□□□ -1.05
RNU6-235P-201ENST00000362644 ABCB7O75027 752 aa8.47□□□□□ -1.05
RNU6-235P-201ENST00000362644 SAMD1Q6SPF0 538 aaPredicted RBP8.42□□□□□ -1.06
RNU6-235P-201ENST00000362644 CHRDL2Q6WN34 429 aa8.42□□□□□ -1.06
RNU6-235P-201ENST00000362644 SLC4A2P04920 1241 aa8.39□□□□□ -1.07
RNU6-235P-201ENST00000362644 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
RNU6-235P-201ENST00000362644 POLA2Q14181 598 aa8.21□□□□□ -1.1
RNU6-235P-201ENST00000362644 AKT1S1Q96B36 256 aa8.21□□□□□ -1.1
RNU6-235P-201ENST00000362644 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.1
RNU6-235P-201ENST00000362644 KCNA4P22459 653 aa8.14□□□□□ -1.11
RNU6-235P-201ENST00000362644 MYCNP04198 464 aaPredicted RBP8.12□□□□□ -1.11
RNU6-235P-201ENST00000362644 HAX1O00165 279 aa8.1□□□□□ -1.11
RNU6-235P-201ENST00000362644 PIP4P2Q8N4L2 257 aa8.09□□□□□ -1.11
RNU6-235P-201ENST00000362644 REM2Q8IYK8 340 aaPredicted RBP8.07□□□□□ -1.12
RNU6-235P-201ENST00000362644 FXR2P51116 673 aaKnown RBP eCLIP8.02□□□□□ -1.13
RNU6-235P-201ENST00000362644 PITPNM1O00562 1244 aa7.97□□□□□ -1.13
RNU6-235P-201ENST00000362644 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
RNU6-235P-201ENST00000362644 EVX2Q03828 476 aa7.85□□□□□ -1.15
RNU6-235P-201ENST00000362644 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
RNU6-235P-201ENST00000362644 SPDYE2BA6NHP3 402 aa7.81□□□□□ -1.16
RNU6-235P-201ENST00000362644 SPDYE6P0CI01 402 aa7.81□□□□□ -1.16
RNU6-235P-201ENST00000362644 SPDYE2Q495Y8 402 aa7.81□□□□□ -1.16
RNU6-235P-201ENST00000362644 FOXD4L1Q9NU39 408 aa7.81□□□□□ -1.16
RNU6-235P-201ENST00000362644 LHX8Q68G74 356 aa7.8□□□□□ -1.16
RNU6-235P-201ENST00000362644 C19orf67A6NJJ6 358 aa7.77□□□□□ -1.17
RNU6-235P-201ENST00000362644 PRKAR2AP13861 404 aaKnown RBP7.77□□□□□ -1.17
RNU6-235P-201ENST00000362644 SPDYE1Q8NFV5 336 aaPredicted RBP7.77□□□□□ -1.17
RNU6-235P-201ENST00000362644 GABBR2O75899 941 aa7.73□□□□□ -1.17
RNU6-235P-201ENST00000362644 FBLN2P98095 1184 aa7.72□□□□□ -1.17
RNU6-235P-201ENST00000362644 CLEC11AQ9Y240 323 aa7.7□□□□□ -1.18
RNU6-235P-201ENST00000362644 ATXN8OSP0DMR3 200 aa7.68□□□□□ -1.18
RNU6-235P-201ENST00000362644 CLCN6P51797 869 aa7.66□□□□□ -1.18
RNU6-235P-201ENST00000362644 SLC4A1APQ9BWU0 796 aaKnown RBP7.66□□□□□ -1.18
RNU6-235P-201ENST00000362644 ZNF692Q9BU19 519 aaPredicted RBP7.61□□□□□ -1.19
RNU6-235P-201ENST00000362644 SSUH2Q9Y2M2 353 aa7.61□□□□□ -1.19
RNU6-235P-201ENST00000362644 PLSCR2Q9NRY7 297 aa7.6□□□□□ -1.19
RNU6-235P-201ENST00000362644 PRR29P0C7W0 189 aa7.56□□□□□ -1.2
RNU6-235P-201ENST00000362644 CHADLQ6NUI6 762 aa7.53□□□□□ -1.2
RNU6-235P-201ENST00000362644 CD44P16070 742 aaKnown RBP7.52□□□□□ -1.21
RNU6-235P-201ENST00000362644 POTEIP0CG38 1075 aa7.51□□□□□ -1.21
RNU6-235P-201ENST00000362644 DCBLD2Q96PD2 775 aa7.5□□□□□ -1.21
RNU6-235P-201ENST00000362644 MKRN4PQ13434 485 aaPredicted RBP7.48□□□□□ -1.21
RNU6-235P-201ENST00000362644 FARP1Q9Y4F1 1045 aaPredicted RBP7.47□□□□□ -1.21
RNU6-235P-201ENST00000362644 PABPN1Q86U42 306 aaKnown RBP eCLIP7.45□□□□□ -1.22
RNU6-235P-201ENST00000362644 ZBTB22O15209 634 aa7.43□□□□□ -1.22
RNU6-235P-201ENST00000362644 ZNF579Q8NAF0 562 aaKnown RBP7.41□□□□□ -1.22
RNU6-235P-201ENST00000362644 PCDH10Q9P2E7 1040 aa7.4□□□□□ -1.22
RNU6-235P-201ENST00000362644 POTEMA6NI47 508 aa7.35□□□□□ -1.23
RNU6-235P-201ENST00000362644 OTUD5Q96G74 571 aa7.35□□□□□ -1.23
RNU6-235P-201ENST00000362644 ZRANB1Q9UGI0 708 aa7.34□□□□□ -1.23
RNU6-235P-201ENST00000362644 POTEGQ6S5H5 508 aa7.32□□□□□ -1.24
RNU6-235P-201ENST00000362644 PAK3O75914 559 aaPredicted RBP7.29□□□□□ -1.24
RNU6-235P-201ENST00000362644 STAG3Q9UJ98 1225 aa7.28□□□□□ -1.24
RNU6-235P-201ENST00000362644 GALR2O43603 387 aaPredicted RBP7.27□□□□□ -1.25
RNU6-235P-201ENST00000362644 MAMSTRQ6ZN01 415 aa7.25□□□□□ -1.25
RNU6-235P-201ENST00000362644 POTEB2H3BUK9 544 aa7.24□□□□□ -1.25
RNU6-235P-201ENST00000362644 CREBZFQ9NS37 354 aa7.22□□□□□ -1.25
RNU6-235P-201ENST00000362644 C7P10643 843 aa7.2□□□□□ -1.26
RNU6-235P-201ENST00000362644 NPM1P06748 294 aaKnown RBP eCLIP7.19□□□□□ -1.26
RNU6-235P-201ENST00000362644 SLC39A7Q92504 469 aa7.19□□□□□ -1.26
RNU6-235P-201ENST00000362644 ASTLQ6HA08 431 aaPredicted RBP7.16□□□□□ -1.26
RNU6-235P-201ENST00000362644 METRNQ9UJH8 293 aa7.16□□□□□ -1.26
RNU6-235P-201ENST00000362644 PHF12Q96QT6 1004 aa7.15□□□□□ -1.26
RNU6-235P-201ENST00000362644 PELP1Q8IZL8 1130 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms