RNA–Protein interactions for RNA: ENST00000362057.3

WHRN-202, Transcript of whirlin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WHRN, Length 3,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHRN-202ENST00000362057 NISCHQ9Y2I1 1504 aa32.29■■■□□ 2.76
WHRN-202ENST00000362057 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
WHRN-202ENST00000362057 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
WHRN-202ENST00000362057 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.99
WHRN-202ENST00000362057 ABCC9O60706 1549 aa27.36■■□□□ 1.97
WHRN-202ENST00000362057 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
WHRN-202ENST00000362057 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
WHRN-202ENST00000362057 SCRIBQ14160 1630 aa26.33■■□□□ 1.81
WHRN-202ENST00000362057 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
WHRN-202ENST00000362057 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
WHRN-202ENST00000362057 NACADO15069 1562 aa25.86■■□□□ 1.73
WHRN-202ENST00000362057 RB1CC1Q8TDY2 1594 aa25.81■■□□□ 1.72
WHRN-202ENST00000362057 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
WHRN-202ENST00000362057 MYO15BQ96JP2 1530 aa25.54■■□□□ 1.68
WHRN-202ENST00000362057 RSF1Q96T23 1441 aaPredicted RBP25.35■■□□□ 1.65
WHRN-202ENST00000362057 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
WHRN-202ENST00000362057 MROH2BQ7Z745 1585 aa25.26■■□□□ 1.63
WHRN-202ENST00000362057 UNC13AQ9UPW8 1703 aa25.25■■□□□ 1.63
WHRN-202ENST00000362057 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
WHRN-202ENST00000362057 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
WHRN-202ENST00000362057 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
WHRN-202ENST00000362057 WIZO95785 1651 aa25.05■■□□□ 1.6
WHRN-202ENST00000362057 BAZ1AQ9NRL2 1556 aaPredicted RBP24.83■■□□□ 1.57
WHRN-202ENST00000362057 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
WHRN-202ENST00000362057 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
WHRN-202ENST00000362057 LOC105371045A0A1W2PR82 267 aa24.74■■□□□ 1.55
WHRN-202ENST00000362057 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
WHRN-202ENST00000362057 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
WHRN-202ENST00000362057 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
WHRN-202ENST00000362057 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
WHRN-202ENST00000362057 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
WHRN-202ENST00000362057 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
WHRN-202ENST00000362057 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
WHRN-202ENST00000362057 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
WHRN-202ENST00000362057 RANGAP1P46060 587 aaPredicted RBP24.29■■□□□ 1.48
WHRN-202ENST00000362057 CC2D2AQ9P2K1 1620 aa24.21■■□□□ 1.47
WHRN-202ENST00000362057 PPARGC1BQ86YN6 1023 aaKnown RBP24.09■■□□□ 1.45
WHRN-202ENST00000362057 TTBK1Q5TCY1 1321 aaPredicted RBP24.07■■□□□ 1.44
WHRN-202ENST00000362057 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
WHRN-202ENST00000362057 PELP1Q8IZL8 1130 aaKnown RBP23.98■■□□□ 1.43
WHRN-202ENST00000362057 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
WHRN-202ENST00000362057 HRCP23327 699 aa23.98■■□□□ 1.43
WHRN-202ENST00000362057 NESP48681 1621 aa23.97■■□□□ 1.43
WHRN-202ENST00000362057 SOGA1O94964 1423 aa23.96■■□□□ 1.43
WHRN-202ENST00000362057 UBTFP17480 764 aaKnown RBP23.95■■□□□ 1.42
WHRN-202ENST00000362057 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
WHRN-202ENST00000362057 RUSC2Q8N2Y8 1516 aa23.92■■□□□ 1.42
WHRN-202ENST00000362057 HMGXB3Q12766 1538 aa23.8■■□□□ 1.4
WHRN-202ENST00000362057 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
WHRN-202ENST00000362057 CSRNP3Q8WYN3 585 aa23.75■■□□□ 1.39
WHRN-202ENST00000362057 SYNJ1O43426 1573 aa23.71■■□□□ 1.39
WHRN-202ENST00000362057 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
WHRN-202ENST00000362057 CFTRP13569 1480 aa23.65■■□□□ 1.38
WHRN-202ENST00000362057 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
WHRN-202ENST00000362057 CUX1P39880 1505 aa23.51■■□□□ 1.35
WHRN-202ENST00000362057 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
WHRN-202ENST00000362057 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
WHRN-202ENST00000362057 TDRD9Q8NDG6 1382 aaKnown RBP23.42■■□□□ 1.34
WHRN-202ENST00000362057 CUX2O14529 1486 aa23.4■■□□□ 1.34
WHRN-202ENST00000362057 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
WHRN-202ENST00000362057 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
WHRN-202ENST00000362057 SCAF1Q9H7N4 1312 aaKnown RBP23.34■■□□□ 1.33
WHRN-202ENST00000362057 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
WHRN-202ENST00000362057 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
WHRN-202ENST00000362057 FBLN2P98095 1184 aa23.34■■□□□ 1.33
WHRN-202ENST00000362057 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
WHRN-202ENST00000362057 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
WHRN-202ENST00000362057 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
WHRN-202ENST00000362057 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
WHRN-202ENST00000362057 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
WHRN-202ENST00000362057 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
WHRN-202ENST00000362057 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
WHRN-202ENST00000362057 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
WHRN-202ENST00000362057 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
WHRN-202ENST00000362057 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
WHRN-202ENST00000362057 KIF21AQ7Z4S6 1674 aa23.15■■□□□ 1.3
WHRN-202ENST00000362057 IGF1RP08069 1367 aa23.14■■□□□ 1.29
WHRN-202ENST00000362057 AQRO60306 1485 aaKnown RBP eCLIP23.13■■□□□ 1.294e-6■■■■□ 21.9
WHRN-202ENST00000362057 MYT1Q01538 1121 aa23.12■■□□□ 1.29
WHRN-202ENST00000362057 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
WHRN-202ENST00000362057 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
WHRN-202ENST00000362057 EEA1Q15075 1411 aa23.1■■□□□ 1.29
WHRN-202ENST00000362057 TNIKQ9UKE5 1360 aa23.08■■□□□ 1.29
WHRN-202ENST00000362057 APLP2Q06481 763 aa23.07■■□□□ 1.28
WHRN-202ENST00000362057 BIVM-ERCC5R4GMW8 1640 aa23.07■■□□□ 1.28
WHRN-202ENST00000362057 CLIP1P30622 1438 aa23.06■■□□□ 1.28
WHRN-202ENST00000362057 TRIM26Q12899 539 aaPredicted RBP23.02■■□□□ 1.28
WHRN-202ENST00000362057 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
WHRN-202ENST00000362057 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
WHRN-202ENST00000362057 ITGAEP38570 1179 aa22.92■■□□□ 1.26
WHRN-202ENST00000362057 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
WHRN-202ENST00000362057 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
WHRN-202ENST00000362057 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
WHRN-202ENST00000362057 PRXQ9BXM0 1461 aa22.9■■□□□ 1.26
WHRN-202ENST00000362057 GAPVD1Q14C86 1478 aa22.89■■□□□ 1.26
WHRN-202ENST00000362057 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
WHRN-202ENST00000362057 KANK4Q5T7N3 995 aaPredicted RBP22.83■■□□□ 1.25
WHRN-202ENST00000362057 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
WHRN-202ENST00000362057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
WHRN-202ENST00000362057 KIF21BO75037 1637 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms