RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 NISCHQ9Y2I1 1504 aa11.03□□□□□ -0.64
PCDH11X-202ENST00000361655 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.74
PCDH11X-202ENST00000361655 SHROOM4Q9ULL8 1493 aa9.91□□□□□ -0.82
PCDH11X-202ENST00000361655 SUPT5HO00267 1087 aaKnown RBP9.73□□□□□ -0.85
PCDH11X-202ENST00000361655 ABCC9O60706 1549 aa9.53□□□□□ -0.88
PCDH11X-202ENST00000361655 PABPN1Q86U42 306 aaKnown RBP eCLIP9.27□□□□□ -0.93
PCDH11X-202ENST00000361655 EHMT2Q96KQ7 1210 aa9.25□□□□□ -0.93
PCDH11X-202ENST00000361655 CCDC180Q9P1Z9 1646 aa9.25□□□□□ -0.93
PCDH11X-202ENST00000361655 ZCCHC6Q5VYS8 1495 aaKnown RBP9.16□□□□□ -0.94
PCDH11X-202ENST00000361655 FAM9AQ8IZU1 332 aaPredicted RBP9.12□□□□□ -0.95
PCDH11X-202ENST00000361655 SCRIBQ14160 1630 aa9.06□□□□□ -0.96
PCDH11X-202ENST00000361655 TRIM41Q8WV44 630 aa8.99□□□□□ -0.97
PCDH11X-202ENST00000361655 RANGAP1P46060 587 aaPredicted RBP8.91□□□□□ -0.98
PCDH11X-202ENST00000361655 RB1CC1Q8TDY2 1594 aa8.9□□□□□ -0.98
PCDH11X-202ENST00000361655 CHIC1Q5VXU3 224 aa8.87□□□□□ -0.99
PCDH11X-202ENST00000361655 NACADO15069 1562 aa8.86□□□□□ -0.99
PCDH11X-202ENST00000361655 TTBK1Q5TCY1 1321 aaPredicted RBP8.83□□□□□ -1
PCDH11X-202ENST00000361655 LOC105371045A0A1W2PR82 267 aa8.8□□□□□ -1
PCDH11X-202ENST00000361655 DCAF1Q9Y4B6 1507 aa8.79□□□□□ -1
PCDH11X-202ENST00000361655 UBTFP17480 764 aaKnown RBP8.78□□□□□ -1
PCDH11X-202ENST00000361655 CECR2Q9BXF3 1484 aa8.74□□□□□ -1.01
PCDH11X-202ENST00000361655 RSF1Q96T23 1441 aaPredicted RBP8.71□□□□□ -1.01
PCDH11X-202ENST00000361655 PPARGC1BQ86YN6 1023 aaKnown RBP8.71□□□□□ -1.02
PCDH11X-202ENST00000361655 ATP1B4Q9UN42 357 aaPredicted RBP8.69□□□□□ -1.02
PCDH11X-202ENST00000361655 APLP2Q06481 763 aa8.68□□□□□ -1.02
PCDH11X-202ENST00000361655 PCGF6Q9BYE7 350 aa8.64□□□□□ -1.03
PCDH11X-202ENST00000361655 MYO15BQ96JP2 1530 aa8.62□□□□□ -1.03
PCDH11X-202ENST00000361655 MROH2BQ7Z745 1585 aa8.6□□□□□ -1.03
PCDH11X-202ENST00000361655 BAZ1AQ9NRL2 1556 aaPredicted RBP8.56□□□□□ -1.04
PCDH11X-202ENST00000361655 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
PCDH11X-202ENST00000361655 FBLN2P98095 1184 aa8.52□□□□□ -1.05
PCDH11X-202ENST00000361655 WIZO95785 1651 aa8.5□□□□□ -1.05
PCDH11X-202ENST00000361655 CSRNP3Q8WYN3 585 aa8.48□□□□□ -1.05
PCDH11X-202ENST00000361655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.46□□□□□ -1.05
PCDH11X-202ENST00000361655 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.05
PCDH11X-202ENST00000361655 P3H3Q8IVL6 736 aa8.45□□□□□ -1.06
PCDH11X-202ENST00000361655 CCDC88BA6NC98 1476 aa8.44□□□□□ -1.06
PCDH11X-202ENST00000361655 ITGAEP38570 1179 aa8.43□□□□□ -1.06
PCDH11X-202ENST00000361655 ATAD2BQ9ULI0 1458 aa8.41□□□□□ -1.06
PCDH11X-202ENST00000361655 SMARCA4P51532 1647 aa8.41□□□□□ -1.06
PCDH11X-202ENST00000361655 ARID3CA6NKF2 412 aa8.39□□□□□ -1.07
PCDH11X-202ENST00000361655 WRNQ14191 1432 aaPredicted RBP eCLIP8.38□□□□□ -1.07
PCDH11X-202ENST00000361655 SMARCA2P51531 1590 aa8.38□□□□□ -1.07
PCDH11X-202ENST00000361655 CCER1Q8TC90 406 aaPredicted RBP8.36□□□□□ -1.07
PCDH11X-202ENST00000361655 TRIM26Q12899 539 aaPredicted RBP8.35□□□□□ -1.07
PCDH11X-202ENST00000361655 ABCC8Q09428 1581 aa8.35□□□□□ -1.07
PCDH11X-202ENST00000361655 BICRAQ9NZM4 1560 aa8.35□□□□□ -1.07
PCDH11X-202ENST00000361655 DNAJC5BQ9UF47 199 aa8.35□□□□□ -1.07
PCDH11X-202ENST00000361655 TOP2AP11388 1531 aaKnown RBP8.34□□□□□ -1.07
PCDH11X-202ENST00000361655 EIF4G1Q04637 1599 aaKnown RBP8.33□□□□□ -1.08
PCDH11X-202ENST00000361655 ERCC6Q03468 1493 aa8.31□□□□□ -1.08
PCDH11X-202ENST00000361655 SOGA1O94964 1423 aa8.3□□□□□ -1.08
PCDH11X-202ENST00000361655 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
PCDH11X-202ENST00000361655 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
PCDH11X-202ENST00000361655 CHMP7Q8WUX9 453 aaPredicted RBP8.27□□□□□ -1.09
PCDH11X-202ENST00000361655 FAM50AQ14320 339 aaKnown RBP8.26□□□□□ -1.09
PCDH11X-202ENST00000361655 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
PCDH11X-202ENST00000361655 NCAPD3P42695 1498 aa8.24□□□□□ -1.09
PCDH11X-202ENST00000361655 CC2D2AQ9P2K1 1620 aa8.24□□□□□ -1.09
PCDH11X-202ENST00000361655 TDRD9Q8NDG6 1382 aaKnown RBP8.23□□□□□ -1.09
PCDH11X-202ENST00000361655 CUX2O14529 1486 aa8.22□□□□□ -1.09
PCDH11X-202ENST00000361655 KIF27Q86VH2 1401 aa8.22□□□□□ -1.09
PCDH11X-202ENST00000361655 PDS5BQ9NTI5 1447 aa8.22□□□□□ -1.09
PCDH11X-202ENST00000361655 NESP48681 1621 aa8.2□□□□□ -1.1
PCDH11X-202ENST00000361655 RUSC2Q8N2Y8 1516 aa8.19□□□□□ -1.1
PCDH11X-202ENST00000361655 FANCD2Q9BXW9 1451 aa8.18□□□□□ -1.1
PCDH11X-202ENST00000361655 CLIP1P30622 1438 aa8.18□□□□□ -1.1
PCDH11X-202ENST00000361655 EEA1Q15075 1411 aa8.16□□□□□ -1.1
PCDH11X-202ENST00000361655 CEP162Q5TB80 1403 aa8.16□□□□□ -1.1
PCDH11X-202ENST00000361655 ZNF777Q9ULD5 760 aaPredicted RBP8.16□□□□□ -1.1
PCDH11X-202ENST00000361655 GOLGA3Q08378 1498 aa8.16□□□□□ -1.1
PCDH11X-202ENST00000361655 CARMIL1Q5VZK9 1371 aa8.16□□□□□ -1.1
PCDH11X-202ENST00000361655 CEP164Q9UPV0 1460 aa8.14□□□□□ -1.11
PCDH11X-202ENST00000361655 ZEB1P37275 1124 aaPredicted RBP8.12□□□□□ -1.11
PCDH11X-202ENST00000361655 TNIKQ9UKE5 1360 aa8.11□□□□□ -1.11
PCDH11X-202ENST00000361655 RAD54L2Q9Y4B4 1467 aa8.11□□□□□ -1.11
PCDH11X-202ENST00000361655 HRCP23327 699 aa8.11□□□□□ -1.11
PCDH11X-202ENST00000361655 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
PCDH11X-202ENST00000361655 CFTRP13569 1480 aa8.1□□□□□ -1.11
PCDH11X-202ENST00000361655 HMGXB3Q12766 1538 aa8.09□□□□□ -1.11
PCDH11X-202ENST00000361655 KCNH8Q96L42 1107 aa8.08□□□□□ -1.12
PCDH11X-202ENST00000361655 CDK11AQ9UQ88 783 aaPredicted RBP8.08□□□□□ -1.12
PCDH11X-202ENST00000361655 FGD5Q6ZNL6 1462 aa8.08□□□□□ -1.12
PCDH11X-202ENST00000361655 NEUROD1Q13562 356 aa8.07□□□□□ -1.12
PCDH11X-202ENST00000361655 CHIC2Q9UKJ5 165 aa8.07□□□□□ -1.12
PCDH11X-202ENST00000361655 RAPGEF2Q9Y4G8 1499 aa8.07□□□□□ -1.12
PCDH11X-202ENST00000361655 MTUS2Q5JR59 1369 aa8.05□□□□□ -1.12
PCDH11X-202ENST00000361655 NPM1P06748 294 aaKnown RBP eCLIP8.05□□□□□ -1.12
PCDH11X-202ENST00000361655 SYNJ1O43426 1573 aa8.04□□□□□ -1.12
PCDH11X-202ENST00000361655 AQRO60306 1485 aaKnown RBP eCLIP8.04□□□□□ -1.12
PCDH11X-202ENST00000361655 IGF1RP08069 1367 aa8.03□□□□□ -1.12
PCDH11X-202ENST00000361655 PEG3Q9GZU2 1588 aa8.01□□□□□ -1.13
PCDH11X-202ENST00000361655 KANK4Q5T7N3 995 aaPredicted RBP8.01□□□□□ -1.13
PCDH11X-202ENST00000361655 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
PCDH11X-202ENST00000361655 CUX1P39880 1505 aa8.01□□□□□ -1.13
PCDH11X-202ENST00000361655 CNGB1Q14028 1251 aaPredicted RBP8.01□□□□□ -1.13
PCDH11X-202ENST00000361655 PLEKHD1A6NEE1 506 aa8□□□□□ -1.13
PCDH11X-202ENST00000361655 GAPVD1Q14C86 1478 aa7.99□□□□□ -1.13
PCDH11X-202ENST00000361655 JPH4Q96JJ6 628 aa7.98□□□□□ -1.13
PCDH11X-202ENST00000361655 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms