RNA–Protein interactions for RNA: ENST00000361024.6

DENND4C-201, Transcript of DENN domain containing 4C, humanhuman

TSL 1 (best)

Gene DENND4C, Length 3,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4C-201ENST00000361024 NISCHQ9Y2I1 1504 aa14.69□□□□□ -0.06
DENND4C-201ENST00000361024 CHIC1Q5VXU3 224 aa13.1□□□□□ -0.31
DENND4C-201ENST00000361024 AEBP2Q6ZN18 517 aaPredicted RBP12.86□□□□□ -0.35
DENND4C-201ENST00000361024 CCDC180Q9P1Z9 1646 aa12.54□□□□□ -0.4
DENND4C-201ENST00000361024 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.41
DENND4C-201ENST00000361024 SHROOM4Q9ULL8 1493 aa12.36□□□□□ -0.43
DENND4C-201ENST00000361024 MYO15BQ96JP2 1530 aa12.25□□□□□ -0.45
DENND4C-201ENST00000361024 DCAF1Q9Y4B6 1507 aa12.13□□□□□ -0.47
DENND4C-201ENST00000361024 SUPT5HO00267 1087 aaKnown RBP12.06□□□□□ -0.48
DENND4C-201ENST00000361024 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
DENND4C-201ENST00000361024 PHF23Q9BUL5 403 aaPredicted RBP11.93□□□□□ -0.5
DENND4C-201ENST00000361024 ABCC9O60706 1549 aa11.88□□□□□ -0.51
DENND4C-201ENST00000361024 HRCP23327 699 aa11.83□□□□□ -0.52
DENND4C-201ENST00000361024 RB1CC1Q8TDY2 1594 aa11.65□□□□□ -0.55
DENND4C-201ENST00000361024 SCRIBQ14160 1630 aa11.64□□□□□ -0.55
DENND4C-201ENST00000361024 RSF1Q96T23 1441 aaPredicted RBP11.64□□□□□ -0.55
DENND4C-201ENST00000361024 PCGF6Q9BYE7 350 aa11.61□□□□□ -0.55
DENND4C-201ENST00000361024 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
DENND4C-201ENST00000361024 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
DENND4C-201ENST00000361024 PPARGC1BQ86YN6 1023 aaKnown RBP11.59□□□□□ -0.55
DENND4C-201ENST00000361024 EIF4G1Q04637 1599 aaKnown RBP11.56□□□□□ -0.56
DENND4C-201ENST00000361024 WIZO95785 1651 aa11.45□□□□□ -0.58
DENND4C-201ENST00000361024 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
DENND4C-201ENST00000361024 CECR2Q9BXF3 1484 aa11.45□□□□□ -0.58
DENND4C-201ENST00000361024 NACADO15069 1562 aa11.42□□□□□ -0.58
DENND4C-201ENST00000361024 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
DENND4C-201ENST00000361024 BAZ1AQ9NRL2 1556 aaPredicted RBP11.39□□□□□ -0.59
DENND4C-201ENST00000361024 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
DENND4C-201ENST00000361024 UNC13AQ9UPW8 1703 aa11.37□□□□□ -0.59
DENND4C-201ENST00000361024 PLPPR3Q6T4P5 718 aa11.3□□□□□ -0.6
DENND4C-201ENST00000361024 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
DENND4C-201ENST00000361024 SMARCA4P51532 1647 aa11.21□□□□□ -0.61
DENND4C-201ENST00000361024 TOP2AP11388 1531 aaKnown RBP11.21□□□□□ -0.62
DENND4C-201ENST00000361024 SMARCA2P51531 1590 aa11.21□□□□□ -0.62
DENND4C-201ENST00000361024 KCNA4P22459 653 aa11.19□□□□□ -0.62
DENND4C-201ENST00000361024 ABCC8Q09428 1581 aa11.18□□□□□ -0.62
DENND4C-201ENST00000361024 CCDC88BA6NC98 1476 aa11.14□□□□□ -0.63
DENND4C-201ENST00000361024 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
DENND4C-201ENST00000361024 FAM9AQ8IZU1 332 aaPredicted RBP11.1□□□□□ -0.63
DENND4C-201ENST00000361024 BICRAQ9NZM4 1560 aa11.08□□□□□ -0.64
DENND4C-201ENST00000361024 ZEB1P37275 1124 aaPredicted RBP11.08□□□□□ -0.64
DENND4C-201ENST00000361024 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
DENND4C-201ENST00000361024 SCAF1Q9H7N4 1312 aaKnown RBP11.05□□□□□ -0.64
DENND4C-201ENST00000361024 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
DENND4C-201ENST00000361024 SOGA1O94964 1423 aa11.03□□□□□ -0.64
DENND4C-201ENST00000361024 CEP162Q5TB80 1403 aa10.98□□□□□ -0.65
DENND4C-201ENST00000361024 SYNJ1O43426 1573 aa10.98□□□□□ -0.65
DENND4C-201ENST00000361024 CSRNP3Q8WYN3 585 aa10.97□□□□□ -0.65
DENND4C-201ENST00000361024 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
DENND4C-201ENST00000361024 KIF21BO75037 1637 aa10.95□□□□□ -0.66
DENND4C-201ENST00000361024 TNIKQ9UKE5 1360 aa10.94□□□□□ -0.66
DENND4C-201ENST00000361024 ADRA2BP18089 450 aa10.92□□□□□ -0.66
DENND4C-201ENST00000361024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
DENND4C-201ENST00000361024 EEA1Q15075 1411 aa10.89□□□□□ -0.67
DENND4C-201ENST00000361024 GOLGA3Q08378 1498 aa10.85□□□□□ -0.67
DENND4C-201ENST00000361024 BIVM-ERCC5R4GMW8 1640 aa10.84□□□□□ -0.67
DENND4C-201ENST00000361024 TOP2BQ02880 1626 aa10.81□□□□□ -0.68
DENND4C-201ENST00000361024 NEUROD1Q13562 356 aa10.81□□□□□ -0.68
DENND4C-201ENST00000361024 ATAD2BQ9ULI0 1458 aa10.79□□□□□ -0.68
DENND4C-201ENST00000361024 ACIN1Q9UKV3 1341 aaKnown RBP10.78□□□□□ -0.68
DENND4C-201ENST00000361024 BAZ1BQ9UIG0 1483 aaKnown RBP10.78□□□□□ -0.68
DENND4C-201ENST00000361024 CEP164Q9UPV0 1460 aa10.77□□□□□ -0.68
DENND4C-201ENST00000361024 RAPGEF2Q9Y4G8 1499 aa10.76□□□□□ -0.69
DENND4C-201ENST00000361024 CLIP1P30622 1438 aa10.75□□□□□ -0.69
DENND4C-201ENST00000361024 CCER1Q8TC90 406 aaPredicted RBP10.75□□□□□ -0.69
DENND4C-201ENST00000361024 VPS8Q8N3P4 1428 aa10.73□□□□□ -0.69
DENND4C-201ENST00000361024 DIEXFQ68CQ4 756 aaKnown RBP10.71□□□□□ -0.69
DENND4C-201ENST00000361024 ERICH3Q5RHP9 1530 aa10.7□□□□□ -0.7
DENND4C-201ENST00000361024 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
DENND4C-201ENST00000361024 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
DENND4C-201ENST00000361024 PRXQ9BXM0 1461 aa10.69□□□□□ -0.7
DENND4C-201ENST00000361024 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
DENND4C-201ENST00000361024 CUX1P39880 1505 aa10.66□□□□□ -0.7
DENND4C-201ENST00000361024 TTBK1Q5TCY1 1321 aaPredicted RBP10.65□□□□□ -0.7
DENND4C-201ENST00000361024 PABPN1Q86U42 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
DENND4C-201ENST00000361024 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
DENND4C-201ENST00000361024 HMGXB3Q12766 1538 aa10.64□□□□□ -0.71
DENND4C-201ENST00000361024 CUX2O14529 1486 aa10.62□□□□□ -0.71
DENND4C-201ENST00000361024 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
DENND4C-201ENST00000361024 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
DENND4C-201ENST00000361024 UBTFP17480 764 aaKnown RBP10.59□□□□□ -0.71
DENND4C-201ENST00000361024 RRBP1Q9P2E9 1410 aaKnown RBP10.57□□□□□ -0.72
DENND4C-201ENST00000361024 DHX57Q6P158 1386 aaKnown RBP10.57□□□□□ -0.72
DENND4C-201ENST00000361024 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
DENND4C-201ENST00000361024 MIER1Q8N108 512 aa10.55□□□□□ -0.72
DENND4C-201ENST00000361024 ARHGAP35Q9NRY4 1499 aa10.54□□□□□ -0.72
DENND4C-201ENST00000361024 CFTRP13569 1480 aa10.53□□□□□ -0.72
DENND4C-201ENST00000361024 MAPKBP1O60336 1514 aa10.52□□□□□ -0.72
DENND4C-201ENST00000361024 KANK4Q5T7N3 995 aaPredicted RBP10.5□□□□□ -0.73
DENND4C-201ENST00000361024 CFAP43Q8NDM7 1665 aa10.5□□□□□ -0.73
DENND4C-201ENST00000361024 HNRNPUL2Q1KMD3 747 aaKnown RBP10.49□□□□□ -0.73
DENND4C-201ENST00000361024 TIAM1Q13009 1591 aa10.47□□□□□ -0.73
DENND4C-201ENST00000361024 CENPBP07199 599 aaPredicted RBP10.46□□□□□ -0.73
DENND4C-201ENST00000361024 MAP3K1Q13233 1512 aa10.46□□□□□ -0.73
DENND4C-201ENST00000361024 LRRIQ1Q96JM4 1722 aa10.46□□□□□ -0.73
DENND4C-201ENST00000361024 CLSPNQ9HAW4 1339 aa10.46□□□□□ -0.74
DENND4C-201ENST00000361024 PRKCSHP14314 528 aaPredicted RBP10.42□□□□□ -0.74
DENND4C-201ENST00000361024 PPP6R1Q9UPN7 881 aa10.42□□□□□ -0.74
DENND4C-201ENST00000361024 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
DENND4C-201ENST00000361024 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms