RNA–Protein interactions for RNA: ENST00000360835.8

SCUBE1-202, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-202ENST00000360835 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
SCUBE1-202ENST00000360835 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
SCUBE1-202ENST00000360835 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
SCUBE1-202ENST00000360835 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
SCUBE1-202ENST00000360835 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
SCUBE1-202ENST00000360835 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
SCUBE1-202ENST00000360835 APLP2Q06481 763 aa22.84■■□□□ 1.25
SCUBE1-202ENST00000360835 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
SCUBE1-202ENST00000360835 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
SCUBE1-202ENST00000360835 FAM9AQ8IZU1 332 aaPredicted RBP22.5■■□□□ 1.19
SCUBE1-202ENST00000360835 CENPBP07199 599 aaPredicted RBP22.48■■□□□ 1.19
SCUBE1-202ENST00000360835 TTBK1Q5TCY1 1321 aaPredicted RBP22.34■■□□□ 1.17
SCUBE1-202ENST00000360835 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
SCUBE1-202ENST00000360835 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
SCUBE1-202ENST00000360835 ERICH6Q7L0X2 663 aa22.14■■□□□ 1.13
SCUBE1-202ENST00000360835 MYT1Q01538 1121 aa22.05■■□□□ 1.12
SCUBE1-202ENST00000360835 RANGAP1P46060 587 aaPredicted RBP21.96■■□□□ 1.11
SCUBE1-202ENST00000360835 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
SCUBE1-202ENST00000360835 NEFLP07196 543 aa21.88■■□□□ 1.09
SCUBE1-202ENST00000360835 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.09
SCUBE1-202ENST00000360835 YTHDC1Q96MU7 727 aaKnown RBP21.79■■□□□ 1.08
SCUBE1-202ENST00000360835 ATP1B4Q9UN42 357 aaPredicted RBP21.76■■□□□ 1.07
SCUBE1-202ENST00000360835 HRCP23327 699 aa21.74■■□□□ 1.07
SCUBE1-202ENST00000360835 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
SCUBE1-202ENST00000360835 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
SCUBE1-202ENST00000360835 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
SCUBE1-202ENST00000360835 DAXXQ9UER7 740 aaPredicted RBP21.19■□□□□ 0.98
SCUBE1-202ENST00000360835 ITGAEP38570 1179 aa21.17■□□□□ 0.98
SCUBE1-202ENST00000360835 HNRNPUL2Q1KMD3 747 aaKnown RBP21.15■□□□□ 0.98
SCUBE1-202ENST00000360835 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
SCUBE1-202ENST00000360835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.03■□□□□ 0.96
SCUBE1-202ENST00000360835 POLR3GLQ9BT43 218 aa21■□□□□ 0.95
SCUBE1-202ENST00000360835 RTL5Q5HYW3 569 aaPredicted RBP20.83■□□□□ 0.93
SCUBE1-202ENST00000360835 MYT1LQ9UL68 1186 aa20.79■□□□□ 0.92
SCUBE1-202ENST00000360835 ZNF316A6NFI3 1004 aaPredicted RBP20.74■□□□□ 0.91
SCUBE1-202ENST00000360835 CNGB1Q14028 1251 aaPredicted RBP20.72■□□□□ 0.91
SCUBE1-202ENST00000360835 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
SCUBE1-202ENST00000360835 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
SCUBE1-202ENST00000360835 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
SCUBE1-202ENST00000360835 ANP32CO43423 234 aa20.59■□□□□ 0.89
SCUBE1-202ENST00000360835 NEUROD1Q13562 356 aa20.56■□□□□ 0.88
SCUBE1-202ENST00000360835 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
SCUBE1-202ENST00000360835 ABCC9O60706 1549 aa20.53■□□□□ 0.88
SCUBE1-202ENST00000360835 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
SCUBE1-202ENST00000360835 BCANQ96GW7 911 aa20.51■□□□□ 0.87
SCUBE1-202ENST00000360835 CDK11AQ9UQ88 783 aaPredicted RBP20.51■□□□□ 0.87
SCUBE1-202ENST00000360835 ACIN1Q9UKV3 1341 aaKnown RBP20.48■□□□□ 0.87
SCUBE1-202ENST00000360835 DCAF1Q9Y4B6 1507 aa20.47■□□□□ 0.87
SCUBE1-202ENST00000360835 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
SCUBE1-202ENST00000360835 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
SCUBE1-202ENST00000360835 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
SCUBE1-202ENST00000360835 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
SCUBE1-202ENST00000360835 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
SCUBE1-202ENST00000360835 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
SCUBE1-202ENST00000360835 ANP32AP39687 249 aaKnown RBP20.21■□□□□ 0.83
SCUBE1-202ENST00000360835 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
SCUBE1-202ENST00000360835 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
SCUBE1-202ENST00000360835 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
SCUBE1-202ENST00000360835 P3H3Q8IVL6 736 aa20.02■□□□□ 0.8
SCUBE1-202ENST00000360835 FKBP8Q14318 412 aa20.01■□□□□ 0.79
SCUBE1-202ENST00000360835 NEFMP07197 916 aa20■□□□□ 0.79
SCUBE1-202ENST00000360835 FBLN2P98095 1184 aa19.97■□□□□ 0.79
SCUBE1-202ENST00000360835 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
SCUBE1-202ENST00000360835 HNRNPUQ00839 825 aaKnown RBP eCLIP19.92■□□□□ 0.78
SCUBE1-202ENST00000360835 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
SCUBE1-202ENST00000360835 ZNF777Q9ULD5 760 aaPredicted RBP19.87■□□□□ 0.77
SCUBE1-202ENST00000360835 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
SCUBE1-202ENST00000360835 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
SCUBE1-202ENST00000360835 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
SCUBE1-202ENST00000360835 ANP32BQ92688 251 aaKnown RBP19.81■□□□□ 0.76
SCUBE1-202ENST00000360835 UPF2Q9HAU5 1272 aaKnown RBP19.81■□□□□ 0.76
SCUBE1-202ENST00000360835 BCL11AQ9H165 835 aa19.8■□□□□ 0.76
SCUBE1-202ENST00000360835 CLIP1P30622 1438 aa19.79■□□□□ 0.76
SCUBE1-202ENST00000360835 FAM9BQ8IZU0 186 aa19.79■□□□□ 0.76
SCUBE1-202ENST00000360835 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
SCUBE1-202ENST00000360835 HSP90AA1P07900 732 aaKnown RBP19.74■□□□□ 0.75
SCUBE1-202ENST00000360835 CCDC136Q96JN2 1154 aa19.74■□□□□ 0.75
SCUBE1-202ENST00000360835 EEA1Q15075 1411 aa19.73■□□□□ 0.75
SCUBE1-202ENST00000360835 MIER1Q8N108 512 aa19.71■□□□□ 0.75
SCUBE1-202ENST00000360835 GOLGA3Q08378 1498 aa19.71■□□□□ 0.75
SCUBE1-202ENST00000360835 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
SCUBE1-202ENST00000360835 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
SCUBE1-202ENST00000360835 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.67■□□□□ 0.74
SCUBE1-202ENST00000360835 EIF5BO60841 1220 aaKnown RBP19.66■□□□□ 0.74
SCUBE1-202ENST00000360835 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
SCUBE1-202ENST00000360835 MTUS2Q5JR59 1369 aa19.65■□□□□ 0.74
SCUBE1-202ENST00000360835 RB1CC1Q8TDY2 1594 aa19.62■□□□□ 0.73
SCUBE1-202ENST00000360835 NBR1Q14596 966 aa19.62■□□□□ 0.73
SCUBE1-202ENST00000360835 GLIPR1L2Q4G1C9 344 aa19.59■□□□□ 0.73
SCUBE1-202ENST00000360835 CHIC2Q9UKJ5 165 aa19.59■□□□□ 0.73
SCUBE1-202ENST00000360835 WDR43Q15061 677 aaKnown RBP eCLIP19.57■□□□□ 0.72
SCUBE1-202ENST00000360835 SALL2Q9Y467 1007 aaPredicted RBP19.54■□□□□ 0.72
SCUBE1-202ENST00000360835 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
SCUBE1-202ENST00000360835 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
SCUBE1-202ENST00000360835 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
SCUBE1-202ENST00000360835 CHGAP10645 457 aaKnown RBP19.49■□□□□ 0.71
SCUBE1-202ENST00000360835 ESF1Q9H501 851 aaKnown RBP19.48■□□□□ 0.71
SCUBE1-202ENST00000360835 IRX6P78412 446 aaPredicted RBP19.47■□□□□ 0.71
SCUBE1-202ENST00000360835 NACADO15069 1562 aa19.47■□□□□ 0.71
SCUBE1-202ENST00000360835 STAG3Q9UJ98 1225 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms